Miyakogusa Predicted Gene

Lj2g3v2353630.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2353630.1 tr|G7JZQ0|G7JZQ0_MEDTR Sorting nexin-1
OS=Medicago truncatula GN=MTR_5g073280 PE=4 SV=1,85.31,0,PX
domain,Phox homologous domain; BAR/IMD domain-like,NULL; no
description,Phox homologous domain; P,CUFF.38876.1
         (592 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698...   778   0.0  
Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201...   610   e-175
Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222...   123   7e-28

>Medtr5g073280.1 | sorting nexin 2B | HC | chr5:31210033-31203698 |
           20130731
          Length = 565

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/490 (79%), Positives = 418/490 (85%), Gaps = 12/490 (2%)

Query: 104 KFSNPNSHDTSSYLATPSYADAVFSPFDGETASNCVXXXXXXXXXXXX-XXXXXXXXEYL 162
           +F NPNS +          ADA+F+ FDGET+SN V                     EYL
Sbjct: 87  EFQNPNSPN----------ADAIFTSFDGETSSNGVNTPTRSFSDGGVFSRSESLNSEYL 136

Query: 163 KITVSNPVKEQENSNSIVPGGSSYVTYLITTRTNVLEFGGSEFAVRRRFRDIVTLSDRLS 222
           +ITVSNPVKEQENSNSIVPG +SYVTYLITTRTN+ EFGG+EF VRRRF+D+VTLSDRLS
Sbjct: 137 RITVSNPVKEQENSNSIVPGSNSYVTYLITTRTNLQEFGGNEFGVRRRFKDVVTLSDRLS 196

Query: 223 EAYRGFFIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLADHPVIRKSDEFRVFLQV 282
           EAYRGFFIPPRPDKSIVESQVMQKQEFVEQRRV+LEKYLRRLADHPVIRKSDEFRVFLQV
Sbjct: 197 EAYRGFFIPPRPDKSIVESQVMQKQEFVEQRRVSLEKYLRRLADHPVIRKSDEFRVFLQV 256

Query: 283 QGRMPLPLTTDVASRVLDGAAKLPKQLLGESVIAPHEVVQPAKGGRDLMRLFKELKQSMA 342
           QG++PL  +TDVASRVLDGA KLPKQL+GESVIAP EVVQPAKGGRDL+RLFKELKQSMA
Sbjct: 257 QGKLPLVGSTDVASRVLDGAVKLPKQLMGESVIAPSEVVQPAKGGRDLLRLFKELKQSMA 316

Query: 343 NDWGGSKPPVVEEDKEFLEKKERIQELEQQINGASQQAESLVKAQQDMGETLGELGLAFI 402
           NDWGGSKP VVEEDKEFL KKER+ ELEQQINGASQQAESLVKAQQDMGET+GELGLAFI
Sbjct: 317 NDWGGSKPLVVEEDKEFLAKKERVHELEQQINGASQQAESLVKAQQDMGETMGELGLAFI 376

Query: 403 KLTKFENEEAVLNSQRVRATDMKGVATAAVKASRLYRELNAQTVKHLQDTLHEYLGLMLA 462
           KLTKFENEEAV  SQRVRATDMKGVATAAVKASRL+RELN+QTVKHL DTLHEYLGLMLA
Sbjct: 377 KLTKFENEEAVSESQRVRATDMKGVATAAVKASRLFRELNSQTVKHL-DTLHEYLGLMLA 435

Query: 463 VHSAFSDRSSAXXXXXXXXXXXXXXXXRAEKLEAASSKIFGGDKSRIRKLEELQETIRVT 522
           VHSAF+DR++A                RAEKLEAASSKIFGGDKSR RKLEELQ+TIR T
Sbjct: 436 VHSAFTDRTNALLTVQTLLSELSSLQSRAEKLEAASSKIFGGDKSRTRKLEELQDTIRAT 495

Query: 523 EDAKNIAIREYERIKENNRSELERLDSERQADFLNMLKGFVVNQVGYAEKIANVWTKVAE 582
           EDAKN+AIREYERIKENNRSELERLD ERQADFLNMLKGFVVNQVGYAEKIANVWTKV E
Sbjct: 496 EDAKNVAIREYERIKENNRSELERLDRERQADFLNMLKGFVVNQVGYAEKIANVWTKVVE 555

Query: 583 ETRKYVNEST 592
           +T  Y  EST
Sbjct: 556 DTSGYAKEST 565


>Medtr5g083370.1 | sorting nexin 2B | HC | chr5:35999184-36004201 |
           20130731
          Length = 516

 Score =  610 bits (1574), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 308/481 (64%), Positives = 371/481 (77%), Gaps = 14/481 (2%)

Query: 114 SSYLATPSYADAVFSPFDGETASNCVXXXXXXXXXXXXXXXXXXXXEYLKITVSNPVKEQ 173
           +S+L  PSYA+A+F+ FD       +                    + + I+VS+P +EQ
Sbjct: 48  NSFLDPPSYAEAIFTSFDSNGHDQTLENLTRAGSGSGTES------DSIHISVSDPQEEQ 101

Query: 174 ENSNSIVPGGSSYVTYLITTRTNVLEFGGSEFAVRRRFRDIVTLSDRLSEAYRGFFIPPR 233
           E +NS+VPGGSSY TYLITTRT     G SE+ VRRRFR++VTLS+RLSE YRG+ IP R
Sbjct: 102 EVTNSLVPGGSSYHTYLITTRT-----GKSEYGVRRRFREVVTLSERLSEVYRGYVIPVR 156

Query: 234 PDKSIVESQVMQKQEFVEQRRVALEKYLRRLADHPVIRKSDEFRVFLQVQGRMPLPLTTD 293
           P+KS VE +VMQK+EFVEQRR+ALEKYLR+L  HPVI KS+E RVFLQVQG++PL  TTD
Sbjct: 157 PEKSSVERKVMQKEEFVEQRRLALEKYLRKLGLHPVIGKSEELRVFLQVQGKLPLMRTTD 216

Query: 294 VASRVLDGAAKLPKQLLG--ESVIAPHEVVQPAKGGRDLMRLFKELKQSMANDWGGSKPP 351
           VASR+LDGA +LP+QL G    V+  ++V QPAK GRDL+R+FKELKQS++NDWGG+KP 
Sbjct: 217 VASRMLDGAVRLPRQLFGAESGVVDLNDVAQPAKSGRDLLRIFKELKQSVSNDWGGAKPL 276

Query: 352 VVEEDKEFLEKKERIQELEQQINGASQQAESLVKAQQDMGETLGELGLAFIKLTKFENEE 411
           VVEEDKEF+EKK+++ E EQQ++  SQQAESLVK QQDMGET+GELGLAF+KLTKFE EE
Sbjct: 277 VVEEDKEFMEKKDKLMEFEQQLSNVSQQAESLVKFQQDMGETMGELGLAFVKLTKFETEE 336

Query: 412 AVLNSQRVRATDMKGVATAAVKASRLYRELNAQTVKHLQDTLHEYLGLMLAVHSAFSDRS 471
           A   SQRVRA DMK VATAAVKASRLYRELN QT+KHL D LHEYLG MLA+++AF+DRS
Sbjct: 337 AEFESQRVRAADMKNVATAAVKASRLYRELNTQTIKHL-DKLHEYLGTMLAINNAFADRS 395

Query: 472 SAXXXXXXXXXXXXXXXXRAEKLEAASSKIFGGDKSRIRKLEELQETIRVTEDAKNIAIR 531
           SA                R EKLE ASS+IFGGDKSR+RK+EEL+E +RVTE AK  A R
Sbjct: 396 SALLTVQTLSSELASLHSRIEKLEVASSRIFGGDKSRMRKIEELKEAVRVTESAKICADR 455

Query: 532 EYERIKENNRSELERLDSERQADFLNMLKGFVVNQVGYAEKIANVWTKVAEETRKYVNES 591
           EYERIKENNRSELER+D ERQ+DF NML+GFVVNQ GYAEK+A VW K+AEET  Y ++S
Sbjct: 456 EYERIKENNRSELERIDKERQSDFQNMLRGFVVNQAGYAEKMAAVWEKLAEETSTYSSDS 515

Query: 592 T 592
           +
Sbjct: 516 S 516


>Medtr1g059650.1 | sorting nexin 2B | HC | chr1:25932034-25939222 |
           20130731
          Length = 404

 Score =  123 bits (308), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 126/240 (52%), Gaps = 34/240 (14%)

Query: 161 YLKITVSNPVKEQENSNSIVPGGSSYVTYLITTRTNVLEFGGSEFAVRRRFRDIVTLSDR 220
           +L ++V++PVK       +  G  +Y++Y + T+TN  E+ G E  V RR+ D V L DR
Sbjct: 27  FLSVSVTDPVK-------LGNGVQAYISYRVITKTNFTEYQGPEKIVIRRYSDFVWLRDR 79

Query: 221 LSEAYRGFFIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLADHPVIRKSDEFRVFL 280
           L E ++G FIPP P+KS VE +     EF+E RR AL+ ++ R+A H  +R+S++ R FL
Sbjct: 80  LFEKFKGIFIPPLPEKSAVE-KFRFSAEFIEMRRQALDVFVNRIASHHELRQSEDLRTFL 138

Query: 281 QVQGRMPLPLTTDVASRVLDGAAKLPKQLLGESVIAPHEVVQPAKGGRDLMRLFKELKQS 340
           Q +      L +        G  K P                      DLM++FK+++  
Sbjct: 139 QAEEETMERLRSHET-----GIFKKPS---------------------DLMQIFKDVQSR 172

Query: 341 MANDWGGSKPPVVEEDKEFLEKKERIQELEQQINGASQQAESLVKAQQDMGETLGELGLA 400
           +++   G + PV E D E+ + K  I ELE  +  A + A  LVK  +++G++L + G A
Sbjct: 173 VSDVVLGKEKPVEESDAEYEKLKHYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKA 232