Miyakogusa Predicted Gene

Lj2g3v2338400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2338400.1 Non Characterized Hit- tr|C5YQ27|C5YQ27_SORBI
Putative uncharacterized protein Sb08g000570
OS=Sorghu,41.38,1e-18,seg,NULL,CUFF.38861.1
         (241 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g031680.1 | hypothetical protein | HC | chr3:26655586-2665...   238   3e-63
Medtr3g031720.1 | hypothetical protein | HC | chr3:26642146-2664...   230   8e-61

>Medtr3g031680.1 | hypothetical protein | HC |
           chr3:26655586-26656929 | 20130731
          Length = 193

 Score =  238 bits (608), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 118/181 (65%), Positives = 143/181 (79%), Gaps = 1/181 (0%)

Query: 3   EQQLSLLRSLIQTRSFGNATLQFLESLLLSKDVTSSIEVXXXXXXXXXXXXXXVIRSIAA 62
           EQQLSL R LIQTRSFG++TL+FL+SLL+SKDV S +E+              +I SI A
Sbjct: 6   EQQLSLFRYLIQTRSFGDSTLRFLDSLLISKDVKSLVEIRSSLTQLLKSESLSIIHSITA 65

Query: 63  KTLHEKLLVLEFFVRAFALVGDLQSCLALRYEGLVLREIKSASCQWLQVSPVEWLHFVED 122
           +T+H+KLLVL+FFVRAFALVGDL+SCLALRYE LV+RE+KSA+ Q LQVSP+EWL+FVED
Sbjct: 66  ETIHDKLLVLDFFVRAFALVGDLESCLALRYEALVMRELKSATIQLLQVSPLEWLNFVED 125

Query: 123 AVHNGFHAVAEKACENALSCLANNDVQKTRSDADSENLK-DVVSEITRLRNCAMASVASR 181
           AV NGFH V+ KACENAL C+ NN+VQK   DA  ENLK + +SEITRLRN A+ S+ SR
Sbjct: 126 AVKNGFHEVSVKACENALRCIGNNNVQKLGRDAIPENLKANAISEITRLRNFALTSITSR 185

Query: 182 S 182
           S
Sbjct: 186 S 186


>Medtr3g031720.1 | hypothetical protein | HC |
           chr3:26642146-26643269 | 20130731
          Length = 198

 Score =  230 bits (587), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 116/190 (61%), Positives = 146/190 (76%), Gaps = 1/190 (0%)

Query: 3   EQQLSLLRSLIQTRSFGNATLQFLESLLLSKDVTSSIEVXXXXXXXXXXXXXXVIRSIAA 62
           EQQLSL R LIQTRSFG++TL+FL+SLL+SKDV S +E+              +I+SI A
Sbjct: 6   EQQLSLFRYLIQTRSFGDSTLRFLDSLLVSKDVKSLVEIRSSLNQLLKSESLSIIQSITA 65

Query: 63  KTLHEKLLVLEFFVRAFALVGDLQSCLALRYEGLVLREIKSASCQWLQVSPVEWLHFVED 122
           +++H KL+VL+FFV AFA+VGDL+SCLALRYE LV+RE+KSA+ Q L VSP+EWL+FVED
Sbjct: 66  ESVHNKLIVLDFFVCAFAIVGDLESCLALRYEALVVRELKSATIQLLHVSPLEWLNFVED 125

Query: 123 AVHNGFHAVAEKACENALSCLANNDVQKTRSDADSENLK-DVVSEITRLRNCAMASVASR 181
           AV NGFHAVA KACENAL C+ N+DVQK   D  S+NLK + +SEITRLRN ++AS+ SR
Sbjct: 126 AVKNGFHAVAVKACENALRCIGNSDVQKLGRDVISDNLKANTISEITRLRNFSLASITSR 185

Query: 182 SVQMQAVEYL 191
           S     +E L
Sbjct: 186 SAPTLQIEGL 195