Miyakogusa Predicted Gene

Lj2g3v2279590.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2279590.1 Non Characterized Hit- tr|K4CQ49|K4CQ49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,71.67,1e-16,CXXU_selWTH: selT/selW/selH selenoprotein
domain,Selenoprotein, Rdx type; Rdx,Selenoprotein, Rdx
typ,CUFF.38791.1
         (225 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g071240.1 | selT/selW/selH selenoprotein domain protein | ...   288   2e-78
Medtr4g015610.1 | selT/selW/selH selenoprotein domain protein | ...   217   7e-57

>Medtr5g071240.1 | selT/selW/selH selenoprotein domain protein | HC
           | chr5:30212148-30215450 | 20130731
          Length = 230

 Score =  288 bits (738), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 151/183 (82%), Positives = 162/183 (88%), Gaps = 2/183 (1%)

Query: 45  VNPATIQFPS--EKTATNIGGVGLGNTVNINYCSSCSYKGTAVTMKNMLEIAFPGTEVVL 102
           +NP T  FPS  EK ATNIGG G GNTVNIN+CSSCSYKGTAVT+K MLEIAFPG EV+ 
Sbjct: 48  INPVTTPFPSDSEKLATNIGGAGFGNTVNINFCSSCSYKGTAVTVKKMLEIAFPGIEVIP 107

Query: 103 ANYPAPLPKRLLSKVVPVVQLGVIGTVVAGEQIFPMMGFVAPPPWYFNLRANKFGTIATT 162
           ANYP PLPKRLLSKVVPVVQ+GVIG VVAGEQIFPM+GFVAPPPWYF+LRAN+FGTIATT
Sbjct: 108 ANYPPPLPKRLLSKVVPVVQIGVIGVVVAGEQIFPMLGFVAPPPWYFSLRANRFGTIATT 167

Query: 163 WLLGNTLQSFLQSSGAFEVYLNGELVFSKLKEARFPGEIELKDLISKKMETSRLVHSASE 222
           WLLGN +QSFLQSSGAFEVY NG LVFSKLKE RFPGEIELKDLI+K+M  SRLV SASE
Sbjct: 168 WLLGNAVQSFLQSSGAFEVYFNGNLVFSKLKEGRFPGEIELKDLITKRMTNSRLVSSASE 227

Query: 223 LNL 225
           L L
Sbjct: 228 LGL 230


>Medtr4g015610.1 | selT/selW/selH selenoprotein domain protein | HC
           | chr4:4695146-4691271 | 20130731
          Length = 223

 Score =  217 bits (553), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 106/166 (63%), Positives = 130/166 (78%), Gaps = 5/166 (3%)

Query: 50  IQFPSEKTA----TNIGGVGLGNTVNINYCSSCSYKGTAVTMKNMLEIAFPGTEVVLANY 105
           + FP +K +      +G +G GNTV+I++C+SCSYKG AV++KN LE  FPG  VVLANY
Sbjct: 53  LDFPIQKQSGIDPIGVGPIGAGNTVSIDFCTSCSYKGNAVSVKNTLESLFPGINVVLANY 112

Query: 106 PAPLPKRLLSKVVPVVQLGVIGTVVAGEQIFPMMGFVAPPPWYFNLRANKFGTIATTWLL 165
           P PLPKR LSKVVPV+Q G I  + AG+QIFP +G V PP  Y++LRANKFG+IA+ WLL
Sbjct: 113 PPPLPKRALSKVVPVLQTGAIIAITAGDQIFPRLG-VTPPQLYYSLRANKFGSIASIWLL 171

Query: 166 GNTLQSFLQSSGAFEVYLNGELVFSKLKEARFPGEIELKDLISKKM 211
            N +QSFLQSSGAFEVY NGELVFSKLKE RFPGE ELK+LI +++
Sbjct: 172 SNFVQSFLQSSGAFEVYFNGELVFSKLKENRFPGEFELKELIGRRI 217