Miyakogusa Predicted Gene

Lj2g3v2279570.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2279570.2 Non Characterized Hit- tr|F6I782|F6I782_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,59.09,0.00000000000004, ,CUFF.38790.2
         (253 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g011480.1 | hypothetical protein | HC | chr8:3113045-31083...   390   e-109

>Medtr8g011480.1 | hypothetical protein | HC | chr8:3113045-3108362
           | 20130731
          Length = 242

 Score =  390 bits (1001), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/248 (79%), Positives = 211/248 (85%), Gaps = 14/248 (5%)

Query: 1   MLSLAKRLQTLKPFLVRGPHHLRNA-RTDTGHSRRRPKSPLLALKKPEEKSEWWAVDGEM 59
           MLSL KRL +L PFL R  H LR+  +    HSRRRPKS  L LKKPEE+SEWW VDGEM
Sbjct: 1   MLSLTKRLSSLTPFLSRTSHQLRSPPQPSPTHSRRRPKSTPLPLKKPEERSEWWIVDGEM 60

Query: 60  HEIGDNVPLRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKRYMELYNELR 119
           HEIGD+VP RERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKRYMELYNELR
Sbjct: 61  HEIGDHVPPRERFVIPRENIPNKRRKQLREQFMRRTRLVLKESEHDPWCKRYMELYNELR 120

Query: 120 ENWERLYWDEGFSKKLAQDHANYESAEEDDEDFSPYRNRRSQMEHSKDLNFVRSRQSDTG 179
           ENWERLYWDEGFS KLA+DHANYESAE+DDEDFSPYRNRR QME++KDLNFV        
Sbjct: 121 ENWERLYWDEGFSNKLARDHANYESAEDDDEDFSPYRNRRPQMEYNKDLNFV-------- 172

Query: 180 DQNFGRSRQSDTWEKVNLIRDKFEYDRDRRLREKAFAPMHGGTVPDSHDSDFWNQPLNTD 239
                R R+SDT EKVNLIRDKFEYDR+RR+REKAFAPMHGG+V DSHDS+ WNQPLNTD
Sbjct: 173 -----RDRKSDTLEKVNLIRDKFEYDRERRMREKAFAPMHGGSVADSHDSEGWNQPLNTD 227

Query: 240 RYFSQTER 247
           RYFSQTER
Sbjct: 228 RYFSQTER 235