Miyakogusa Predicted Gene

Lj2g3v2277510.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2277510.1 Non Characterized Hit- tr|F4KGA5|F4KGA5_ARATH
Uncharacterized protein OS=Arabidopsis thaliana
GN=At5,28.21,3e-16,seg,NULL; VARLMGL,NULL,CUFF.38783.1
         (390 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g071090.1 | hypothetical protein | HC | chr5:30136223-3013...   197   2e-50
Medtr3g464300.1 | hypothetical protein | HC | chr3:25825954-2582...   142   4e-34

>Medtr5g071090.1 | hypothetical protein | HC |
           chr5:30136223-30134605 | 20130731
          Length = 312

 Score =  197 bits (500), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/234 (54%), Positives = 153/234 (65%), Gaps = 7/234 (2%)

Query: 154 VP-SFHLLENENFLVLSFESGCESKEFXXXXXXXXXXXXXXXXVSGMSCVNVGNGGEVQF 212
           VP +FHLLENENFLV SFESG E+++F                V       V + GE  F
Sbjct: 81  VPQAFHLLENENFLVFSFESGGENRKFKSKGRRKEKKREVRGEVKRNKREKVNDDGEFHF 140

Query: 213 ATNMKHKEGANGEKVKKRKKGTAAFYNTEKKVESECSSEDASPVSVFDFERDAPRTDVDI 272
             ++  K   NGEKVKKRKKG       E+KVESECSSED SPVSVFDFE D   T+ D+
Sbjct: 141 EKSL-FKAVGNGEKVKKRKKGKTCC--VEEKVESECSSEDYSPVSVFDFEHDVSGTEEDL 197

Query: 273 FGDDMNWRRKLSPELENDQHFILHSDGIFMNEER-KINEIENSKHEGPKNKEKQSQEFVH 331
              DM+WRRKLSP LENDQ FILHSD  FMNEE  K+ EIEN+ +EG + KE+ + E V 
Sbjct: 198 CDVDMSWRRKLSPVLENDQLFILHSDSNFMNEEESKVKEIENNLNEGSRKKERHNNECVD 257

Query: 332 IWGEICRLVEDELVRSNQLQEVMRKQGDFGSISADLESEIFDHLLNELVDQLVG 385
           IW +IC+LV+DELV  ++L EV RKQ D  +ISAD E EI D LL+E++DQ V 
Sbjct: 258 IWIKICKLVDDELV--SELHEVKRKQNDLENISADFELEILDELLDEVIDQFVS 309


>Medtr3g464300.1 | hypothetical protein | HC |
           chr3:25825954-25824350 | 20130731
          Length = 409

 Score =  142 bits (359), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/147 (51%), Positives = 98/147 (66%), Gaps = 2/147 (1%)

Query: 240 TEKKVESECSSEDASPVSVFDFERDAPRTDVDIFGDDMNWRRKLSPELENDQHFILHSDG 299
           TE+K+E+EC S+D SPVSV +FER +    +D     +N RRKL+PELE  +H  + SD 
Sbjct: 262 TEQKIETECKSDDLSPVSVLEFERKSCVAGIDSVAVGLNPRRKLTPELETGKHIRMRSDD 321

Query: 300 IFMNEERKINEIENSKHEGPKNKEKQS-QEFVHIWGEICRLVEDELVRS-NQLQEVMRKQ 357
             M +E+    I+N+ +EG K KEKQS +E++ IW E CRLV DEL  S NQ+   M +Q
Sbjct: 322 NLMIDEKNDKAIQNNIYEGSKKKEKQSYKEYIDIWDEACRLVGDELAGSKNQVHVWMNEQ 381

Query: 358 GDFGSISADLESEIFDHLLNELVDQLV 384
            D GSI  D ESEIFD LLNE+V QLV
Sbjct: 382 SDLGSICTDFESEIFDQLLNEVVTQLV 408



 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 72/150 (48%), Gaps = 16/150 (10%)

Query: 26  NPTLCNSK----SGCLTSILHRILCSGALQTHPSDQIIELGSSMSVVSGKVQEFKAMQNT 81
           +P +C+S     +GCLT+I+ +ILCSG L    S+Q  E  S+ SV+S            
Sbjct: 21  SPPMCSSSKSTTTGCLTAIMRKILCSGNLPKDSSNQTTEFDSANSVLSVNDHNL------ 74

Query: 82  EAANSTKISPGVVGRLMGLDSMGEVQKXXXXXXXXXXXXXXXXXVDYLGECK-RMEGLHR 140
              ++    P +V RLMGL+SM EV                   +DYLGE   ++E LH 
Sbjct: 75  -GVSAVTPPPPLVARLMGLESMVEVP--FASKPGSLSRSKSMNSLDYLGESNGKIESLHH 131

Query: 141 RVKXXXXXXXXXEVPSFHLLENENFLVLSF 170
             K         E P+F + ENE+F VLSF
Sbjct: 132 --KRVGSTLSFREPPTFQMSENESFFVLSF 159