Miyakogusa Predicted Gene

Lj2g3v2266450.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2266450.1 tr|B9HP31|B9HP31_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_833234 PE=4
SV=1,35.98,0.000000000000007,coiled-coil,NULL;
seg,NULL,gene.g43191.t1.1
         (226 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g071060.1 | double Clp-N motif P-loop nucleoside triphosph...   134   1e-31
Medtr5g071060.2 | double Clp-N motif P-loop nucleoside triphosph...   134   1e-31
Medtr3g464150.1 | double Clp-N motif P-loop nucleoside triphosph...   100   2e-21

>Medtr5g071060.1 | double Clp-N motif P-loop nucleoside triphosphate
           hydrolase superfamily protein | HC |
           chr5:30105997-30111708 | 20130731
          Length = 1092

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 117/243 (48%), Gaps = 27/243 (11%)

Query: 2   SPTPSLEFLRFGSGFKDSSSRDLTLVELQCSDT--------------------------V 35
           S  PSLE LRFGSGF + SS+D +L ELQ S                            V
Sbjct: 500 SHVPSLEVLRFGSGFNEGSSKDSSLNELQRSSPFSYMPKELHGTFPSKHLSPTPVHTGRV 559

Query: 36  NVDVRTGCVSKVSNSIQIDTQTPRVTPLPMTNMXXXXXXXXXXXXPVXXXXXXXXXXXXX 95
           +V+V T  V KV+ + Q D  TP + P  M NM            PV             
Sbjct: 560 SVNVGTDRVPKVTETQQNDMTTPWLAPSRMANMSVLENKSSSSLIPVTTDLGLGTLYTST 619

Query: 96  XXXVQERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSSCSGSNLEGIFDKVDF 155
                + DT + Q++IKH +H  ES S +  A+NGNTSH++ RSS   SN+   FD VDF
Sbjct: 620 PI-AHKPDTSEFQDKIKHFEHFPESTSADSVAVNGNTSHKIARSSFPASNMATKFDSVDF 678

Query: 156 KSLNQLLTEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFLFMDQIELEKGKLL 215
           KSLN+LL EKVGWQ+QAI  I++TL L KS +G            F F+    + K K+ 
Sbjct: 679 KSLNKLLFEKVGWQNQAICDINRTLSLHKSGEGKSRDLHGRADIWFAFLGPDRIGKKKIA 738

Query: 216 QRL 218
             L
Sbjct: 739 SAL 741


>Medtr5g071060.2 | double Clp-N motif P-loop nucleoside triphosphate
           hydrolase superfamily protein | HC |
           chr5:30105997-30111708 | 20130731
          Length = 1059

 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 91/243 (37%), Positives = 117/243 (48%), Gaps = 27/243 (11%)

Query: 2   SPTPSLEFLRFGSGFKDSSSRDLTLVELQCSDT--------------------------V 35
           S  PSLE LRFGSGF + SS+D +L ELQ S                            V
Sbjct: 467 SHVPSLEVLRFGSGFNEGSSKDSSLNELQRSSPFSYMPKELHGTFPSKHLSPTPVHTGRV 526

Query: 36  NVDVRTGCVSKVSNSIQIDTQTPRVTPLPMTNMXXXXXXXXXXXXPVXXXXXXXXXXXXX 95
           +V+V T  V KV+ + Q D  TP + P  M NM            PV             
Sbjct: 527 SVNVGTDRVPKVTETQQNDMTTPWLAPSRMANMSVLENKSSSSLIPVTTDLGLGTLYTST 586

Query: 96  XXXVQERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSSCSGSNLEGIFDKVDF 155
                + DT + Q++IKH +H  ES S +  A+NGNTSH++ RSS   SN+   FD VDF
Sbjct: 587 PI-AHKPDTSEFQDKIKHFEHFPESTSADSVAVNGNTSHKIARSSFPASNMATKFDSVDF 645

Query: 156 KSLNQLLTEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFLFMDQIELEKGKLL 215
           KSLN+LL EKVGWQ+QAI  I++TL L KS +G            F F+    + K K+ 
Sbjct: 646 KSLNKLLFEKVGWQNQAICDINRTLSLHKSGEGKSRDLHGRADIWFAFLGPDRIGKKKIA 705

Query: 216 QRL 218
             L
Sbjct: 706 SAL 708


>Medtr3g464150.1 | double Clp-N motif P-loop nucleoside triphosphate
           hydrolase superfamily protein | HC |
           chr3:25772408-25778862 | 20130731
          Length = 1080

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 55/120 (45%), Positives = 74/120 (61%), Gaps = 1/120 (0%)

Query: 100 QERDTPKLQNQIKHLQHLSESISPECDAINGNTSHQLTRSSC-SGSNLEGIFDKVDFKSL 158
            E DTPKL +  KHLQHLS+S+S + DA+N +TS+Q+ RSS  SG N +G F+ VDFKSL
Sbjct: 621 HEPDTPKLNDHKKHLQHLSDSLSTDFDAMNESTSNQIARSSSYSGHNSDGKFEMVDFKSL 680

Query: 159 NQLLTEKVGWQDQAIRAISQTLFLCKSVQGSVEAHTEEQTSGFLFMDQIELEKGKLLQRL 218
            +LL EKV WQD+AI +I   + LC+S  G          + F F+    + K K+   L
Sbjct: 681 YKLLIEKVWWQDEAIYSIINIMTLCRSSDGKRSGSNVRADTWFSFLGPDRVGKRKIASVL 740