Miyakogusa Predicted Gene

Lj2g3v2256380.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2256380.1 tr|E1ZFM4|E1ZFM4_CHLVA Expressed protein
OS=Chlorella variabilis GN=CHLNCDRAFT_57943 PE=4
SV=1,25.59,0.00000000006,seg,NULL; FAMILY NOT NAMED,NULL;
Hap2_elong,Histone acetylation protein 2,CUFF.38779.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g070860.1 | elongator complex protein | HC | chr5:29937418...   540   e-154

>Medtr5g070860.1 | elongator complex protein | HC |
           chr5:29937418-29942347 | 20130731
          Length = 362

 Score =  540 bits (1391), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 269/355 (75%), Positives = 301/355 (84%), Gaps = 12/355 (3%)

Query: 1   MAESICRTLRDGALEGELAPTLTITDSLTSPLASDVFXXXXXXXXXXXIASKSHSQFRSG 60
           M+ESICR+LRDGALEGEL+PTLTI D+L+SP A +VF            + KSHS   + 
Sbjct: 1   MSESICRSLRDGALEGELSPTLTIKDTLSSPFAFNVFSHILLQLS----SPKSHSN--TA 54

Query: 61  IVIVALSRTPSSYAALFKTKGIHISSSNNNWIHILDCYTDPLGWKEKPRKSQNVTNPSHQ 120
           I+IVALSR+PS YA L K KGI +SSSN  WIH+LDCYTDPLGWK+K RKS NVT PS Q
Sbjct: 55  ILIVALSRSPSFYAHLLKNKGIELSSSNK-WIHVLDCYTDPLGWKDKTRKSGNVTIPSDQ 113

Query: 121 VSLATTSYKTVKDLDKLFSVITELGRGLIGENKARFCVAIDSLSELLRHASLQSVAGLLS 180
           +SLATTSYK+VKD+DKLF  ITELGRGL+GENK RFCVAIDSLSELLRHASLQSVAGLLS
Sbjct: 114 ISLATTSYKSVKDMDKLFLAITELGRGLVGENKVRFCVAIDSLSELLRHASLQSVAGLLS 173

Query: 181 NLRSHDQISSIFGLLHSDLHEERAAAVLEYMSSMVASVAPLHHSAERGNLENSLSEQNFT 240
           NLRSHDQISSIFGLLHSDLHEERAA  LEYMSSMVASV   HHS+     ENSLSE+NFT
Sbjct: 174 NLRSHDQISSIFGLLHSDLHEERAATALEYMSSMVASVESDHHSS-----ENSLSEKNFT 228

Query: 241 KGRLNVRFKRRNGRVRVTCEEFKVEAGGISLTSVSSADGATVAGLLPKVQFNLQLSEKEK 300
           +G+ NVR KRRNGRVRVTCE+FKVEAGGIS TSVS+ DG TVAGLLPKVQFNLQLSEKE+
Sbjct: 229 QGKFNVRLKRRNGRVRVTCEKFKVEAGGISFTSVSAEDGTTVAGLLPKVQFNLQLSEKEQ 288

Query: 301 TDRAKVVLPFEHQGTGRPIQIYDGRRSLDDNSSEAAPISSGKKENSEMGEIIYFR 355
            DRAKVVLPFEHQG G PIQIYDGRRSL+++SS+ AP+S GKKE+S++GEIIYFR
Sbjct: 289 VDRAKVVLPFEHQGNGAPIQIYDGRRSLEESSSDGAPLSKGKKEDSDLGEIIYFR 343