Miyakogusa Predicted Gene

Lj2g3v2256320.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2256320.1 Non Characterized Hit- tr|I1JHC6|I1JHC6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.25141
PE,95.05,0,Na_Ca_ex,Sodium/calcium exchanger membrane region; FAMILY
NOT NAMED,NULL; seg,NULL,CUFF.38772.1
         (117 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g070330.1 | vacuolar cation/proton exchanger 3 | HC | chr5...   175   7e-45
Medtr4g016720.1 | vacuolar cation/proton exchanger 3 | HC | chr4...   141   1e-34
Medtr7g068380.1 | vacuolar cation/proton exchanger 3 | HC | chr7...   139   6e-34
Medtr3g082180.1 | vacuolar cation/proton exchanger 3 | HC | chr3...    89   8e-19
Medtr2g105640.1 | vacuolar cation/proton exchanger 3 | HC | chr2...    85   2e-17

>Medtr5g070330.1 | vacuolar cation/proton exchanger 3 | HC |
           chr5:29787688-29782241 | 20130731
          Length = 435

 Score =  175 bits (444), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 88/102 (86%), Positives = 94/102 (92%), Gaps = 1/102 (0%)

Query: 1   MLLAYVAYIFFQLKTHRRLFDAQXXXXXX-XKAVIGFWSAFTWLVGMTLVISLLSEYVVG 59
           MLLAYV+YIFFQLKTHR++FDAQ        KAVIGFWSAF+WLVGMTLVIS+LSEYVVG
Sbjct: 238 MLLAYVSYIFFQLKTHRKIFDAQEVDDEDDEKAVIGFWSAFSWLVGMTLVISVLSEYVVG 297

Query: 60  TIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
           TIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFA+KNKL
Sbjct: 298 TIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAYKNKL 339


>Medtr4g016720.1 | vacuolar cation/proton exchanger 3 | HC |
           chr4:5127680-5132156 | 20130731
          Length = 456

 Score =  141 bits (356), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 72/106 (67%), Positives = 86/106 (81%), Gaps = 5/106 (4%)

Query: 1   MLLAYVAYIFFQLKTHRRLFDAQX-----XXXXXXKAVIGFWSAFTWLVGMTLVISLLSE 55
           M++AY AY+FFQL THR+LF+AQ            +AVIGFWS F WLV MT+ I++LSE
Sbjct: 243 MVIAYFAYLFFQLWTHRQLFEAQDEDDEDCENASEEAVIGFWSGFAWLVIMTVFIAILSE 302

Query: 56  YVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
           YVV TI+ ASDSWG+SVSF+SII+LPIVGNAAEHAG+IIFAFKNKL
Sbjct: 303 YVVDTIQDASDSWGLSVSFLSIIMLPIVGNAAEHAGAIIFAFKNKL 348


>Medtr7g068380.1 | vacuolar cation/proton exchanger 3 | HC |
           chr7:25016522-25012334 | 20130731
          Length = 455

 Score =  139 bits (350), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 5/106 (4%)

Query: 1   MLLAYVAYIFFQLKTHRRLFDAQ-----XXXXXXXKAVIGFWSAFTWLVGMTLVISLLSE 55
           ML AY AY+ FQL THR+LF+A+            +AVIGFWS+F WL GMT+ I+LLSE
Sbjct: 243 MLAAYFAYLIFQLWTHRQLFEAEDEGEGESNEAEEEAVIGFWSSFGWLAGMTVFIALLSE 302

Query: 56  YVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
           YVV TI+ ASDSWG+SVSF+SIILLPIVGNAAEHAG+IIFAFKNKL
Sbjct: 303 YVVDTIQDASDSWGLSVSFLSIILLPIVGNAAEHAGAIIFAFKNKL 348


>Medtr3g082180.1 | vacuolar cation/proton exchanger 3 | HC |
           chr3:37092713-37096025 | 20130731
          Length = 434

 Score = 89.4 bits (220), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 49/110 (44%), Positives = 66/110 (60%), Gaps = 10/110 (9%)

Query: 1   MLLAYVAYIFFQLKTHRRL---------FDAQXXXXXXXKAVIGFWSAFTWLVGMTLVIS 51
           ML+AY +Y+ FQLK  + L         F+            I  W +  W+  +T  IS
Sbjct: 235 MLVAYASYVVFQLKIQKNLELSVHEDKNFNEDASNDAETPE-ISMWESMIWISILTGGIS 293

Query: 52  LLSEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
           +LSEY+V TIE AS  + + VSF+S+ILLP VGNAAEH GS++FA K+KL
Sbjct: 294 ILSEYLVNTIEGASKQFQMPVSFLSVILLPAVGNAAEHVGSVMFAIKDKL 343


>Medtr2g105640.1 | vacuolar cation/proton exchanger 3 | HC |
           chr2:45545809-45538128 | 20130731
          Length = 442

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/108 (43%), Positives = 69/108 (63%), Gaps = 7/108 (6%)

Query: 1   MLLAYVAYIFFQLKTHRRLF-------DAQXXXXXXXKAVIGFWSAFTWLVGMTLVISLL 53
           ML+AY +Y++FQL++ +  +       D         +  +    A  WL  +T+ +S+L
Sbjct: 244 MLVAYASYLYFQLRSQQNFYAPVDQEVDTSENSDEEEELELTQSEAIIWLAILTVWVSVL 303

Query: 54  SEYVVGTIEAASDSWGISVSFISIILLPIVGNAAEHAGSIIFAFKNKL 101
           S Y+V  IE AS+S  +SV+FIS+ILLPIVGNAAEHA +I+FA K+KL
Sbjct: 304 SGYLVDAIEGASESLNMSVAFISVILLPIVGNAAEHASAIMFAVKDKL 351