Miyakogusa Predicted Gene

Lj2g3v2219770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2219770.1 Non Characterized Hit- tr|B9T1U7|B9T1U7_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,77.78,2e-17,UBA-like,UBA-like; DUF1296,Protein of unknown function
DUF1296; APOPTOSIS INHIBITOR 5-RELATED,NULL,CUFF.38736.1
         (91 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g069290.1 | MLP3.11 protein | HC | chr5:29332432-29343493 ...   114   2e-26
Medtr8g019650.1 | plant/MDC16-11 protein | HC | chr8:6959731-696...    69   1e-12
Medtr5g096290.1 | DUF1296 family protein | HC | chr5:42099331-42...    65   1e-11
Medtr8g088190.1 | plant/F15D2-27 protein | HC | chr8:36515508-36...    56   8e-09

>Medtr5g069290.1 | MLP3.11 protein | HC | chr5:29332432-29343493 |
          20130731
          Length = 868

 Score =  114 bits (284), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/54 (96%), Positives = 53/54 (98%)

Query: 1  MSGGGFRASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
          MSG GF+ASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ
Sbjct: 1  MSGSGFKASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54


>Medtr8g019650.1 | plant/MDC16-11 protein | HC |
          chr8:6959731-6967798 | 20130731
          Length = 1006

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/53 (62%), Positives = 39/53 (73%)

Query: 2  SGGGFRASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
          +GG     +   V+KTIQ+IKEI GNHS+ DIY  LKE +MDPNETTQKLL Q
Sbjct: 10 AGGTGTHLLSAKVRKTIQSIKEIVGNHSEADIYVALKETNMDPNETTQKLLNQ 62


>Medtr5g096290.1 | DUF1296 family protein | HC |
          chr5:42099331-42107469 | 20130731
          Length = 773

 Score = 65.5 bits (158), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/44 (65%), Positives = 40/44 (90%), Gaps = 1/44 (2%)

Query: 10 IPNSVKKTIQNIKEITG-NHSDEDIYAMLKECSMDPNETTQKLL 52
          IPN+V+KTI +I+EITG  H+D++I+++LKE +MDPNETTQKLL
Sbjct: 16 IPNNVRKTILDIREITGKQHTDDEIFSVLKESNMDPNETTQKLL 59


>Medtr8g088190.1 | plant/F15D2-27 protein | HC |
          chr8:36515508-36522470 | 20130731
          Length = 865

 Score = 55.8 bits (133), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/47 (48%), Positives = 33/47 (70%)

Query: 8  ASIPNSVKKTIQNIKEITGNHSDEDIYAMLKECSMDPNETTQKLLLQ 54
          + IP + +K +Q++KEI  N  D +IYA LK+C+MDPNE   +LL Q
Sbjct: 16 SGIPAASRKMVQSLKEIVSNIPDNEIYATLKDCNMDPNEAVSRLLSQ 62