Miyakogusa Predicted Gene
- Lj2g3v2197630.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2197630.1 Non Characterized Hit- tr|C5YIN1|C5YIN1_SORBI
Putative uncharacterized protein Sb07g027350
OS=Sorghu,26.77,8e-18,SUBFAMILY NOT NAMED,NULL; CGI-12
PROTEIN-RELATED,NULL; seg,NULL; Mitochondrial termination factor
re,CUFF.38722.1
(521 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g068860.1 | transcription termination factor family protei... 809 0.0
Medtr1g115415.1 | transcription termination factor family protei... 433 e-121
Medtr8g105560.1 | transcription termination factor family protei... 332 6e-91
Medtr4g070060.1 | transcription termination factor family protei... 125 7e-29
Medtr4g084630.1 | transcription termination factor family protei... 122 9e-28
Medtr2g034600.1 | transcription termination factor family protei... 104 2e-22
Medtr2g034600.3 | transcription termination factor family protei... 104 2e-22
Medtr2g034600.2 | transcription termination factor family protei... 104 2e-22
Medtr6g003960.1 | transcription termination factor family protei... 102 7e-22
Medtr5g094610.1 | transcription termination factor family protei... 99 8e-21
Medtr2g067230.1 | transcription termination factor family protei... 81 3e-15
Medtr2g049780.1 | transcription termination factor family protei... 78 2e-14
Medtr5g041630.1 | transcription termination factor family protei... 73 8e-13
Medtr7g081270.1 | transcription termination factor family protei... 60 7e-09
Medtr8g081000.2 | transcription termination factor family protei... 57 5e-08
Medtr8g081000.1 | transcription termination factor family protei... 57 5e-08
Medtr8g081000.3 | transcription termination factor family protei... 57 5e-08
Medtr3g092710.1 | plastid transcriptionally active 15 protein | ... 55 2e-07
Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 | ... 51 2e-06
Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 | ... 51 3e-06
>Medtr5g068860.1 | transcription termination factor family protein |
HC | chr5:29165945-29163659 | 20130731
Length = 530
Score = 809 bits (2090), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/511 (79%), Positives = 441/511 (86%), Gaps = 6/511 (1%)
Query: 1 MSFSGELTKPSFSIGQTEMPILTFGHSKL-GATLALRLPCNCFRRMGLITKLQYSVTNSV 59
M+FSG +TKP+F TEMPILTFGHSKL ATLAL+LPCN R++ ITKLQ SV
Sbjct: 1 MNFSGTITKPNFPFPPTEMPILTFGHSKLTAATLALQLPCNYIRKIRFITKLQCSVAGRT 60
Query: 60 LASRT--VDSPGSKRDSGPVSRRRGGPSSLYV---RPSLSDMKKDKAVMREKVYEFLRGI 114
+ RT DS GSKRDSG + R+R G SSLY RPSLS+MKKDKA +R+ VYEFLRGI
Sbjct: 61 DSYRTSAADSQGSKRDSGEIQRKRRGASSLYAGYARPSLSEMKKDKATLRKVVYEFLRGI 120
Query: 115 GVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLVLGCSVKKNMIPVLDFLGK 174
G+VPDELDGLELPVTVDVM+ERVDFLHSLGLTIEDINNYPLVLGCSVKKNM+PVLD+LGK
Sbjct: 121 GIVPDELDGLELPVTVDVMKERVDFLHSLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGK 180
Query: 175 LGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLE 234
LGVRKST TQFL+ YPQ +GMDI+P+DIPRVLERYPE+LGFKLE
Sbjct: 181 LGVRKSTITQFLRTYPQVLHASVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEVLGFKLE 240
Query: 235 GTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLI 294
GTMSTSVAYLIGIGVGRRELGG+LTR+PEILGMRVGRVIKPFVEYLESLGIPRLA+ARLI
Sbjct: 241 GTMSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIPRLAIARLI 300
Query: 295 ENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNS 354
E +PYILGF LDEKVKPNVKSLEEFNVR TSL S+IAQYPDIIGTDL+ KL ++RSVLNS
Sbjct: 301 ETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDLEPKLADKRSVLNS 360
Query: 355 VLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDIN 414
VLDLD EDFG I+EKMPQVVSLSS P+L HVDFLKDCGFS QM KMIVGCPQLLAL+I+
Sbjct: 361 VLDLDAEDFGLIIEKMPQVVSLSSTPMLKHVDFLKDCGFSVDQMRKMIVGCPQLLALNID 420
Query: 415 IMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSNE 474
IMKLSFD+F EM RPLEDLV FPAFFTYGLESTIKPRH MV KKGLKCSL+WMLNCS+E
Sbjct: 421 IMKLSFDYFQSEMERPLEDLVEFPAFFTYGLESTIKPRHNMVTKKGLKCSLAWMLNCSDE 480
Query: 475 KFEQRMDYDTIDMEEMEMEPSFDMNSLMQPR 505
KFEQRMDYDTIDMEEMEMEPSFDMNSLM+PR
Sbjct: 481 KFEQRMDYDTIDMEEMEMEPSFDMNSLMRPR 511
>Medtr1g115415.1 | transcription termination factor family protein |
HC | chr1:52109146-52107512 | 20130731
Length = 501
Score = 433 bits (1113), Expect = e-121, Method: Compositional matrix adjust.
Identities = 210/400 (52%), Positives = 289/400 (72%), Gaps = 2/400 (0%)
Query: 97 KKDKAVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLV 156
+K+K V R ++++L+G+G++PDEL LELP TV+VMRERV+F+ LGLTI+DIN YPL+
Sbjct: 71 RKEKLVSRVIIFDYLKGLGIIPDELQDLELPSTVEVMRERVEFIQKLGLTIDDINQYPLI 130
Query: 157 LGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPN 216
LGCSV+KNMIPVL +L K+G+ +S +F++ YPQ G+D+ +
Sbjct: 131 LGCSVRKNMIPVLGYLEKIGISRSKLGEFIKNYPQVLHASVIVELAPVIKFLRGLDVEKD 190
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
DI VL++YPELLGFKLEGTMSTSVAYL+ IGV R++G ++T+YP LGMRVG +IKP
Sbjct: 191 DIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQYPYFLGMRVGTMIKPL 250
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDI 336
V+YL +LG+P+ +AR++E R Y+LG+ L+E VKPNV L F +R+ LPSVIAQYP I
Sbjct: 251 VDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPLI 310
Query: 337 IGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQ 396
IG LK KL +Q+ + L +DPE F R+VEKMPQVVSL ++ V+FL SQ
Sbjct: 311 IGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMKPVEFLLGRAIPSQ 370
Query: 397 QMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMV 456
+ M++ CPQL+AL + +MK S+ FF EMGRP+++LV FP +FTY LES IKPR++ +
Sbjct: 371 DVASMVIKCPQLVALRVELMKNSYYFFKSEMGRPVKELVEFPEYFTYSLESRIKPRYQRL 430
Query: 457 AKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEPSF 496
KG+KCSL+WMLNCS+++FE+R+ + I+ E + PSF
Sbjct: 431 KTKGIKCSLNWMLNCSDQRFEERLQGNYIETE--SIGPSF 468
>Medtr8g105560.1 | transcription termination factor family protein |
HC | chr8:44520352-44517998 | 20130731
Length = 560
Score = 332 bits (851), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 180/405 (44%), Positives = 248/405 (61%), Gaps = 65/405 (16%)
Query: 97 KKDKAVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINNYPLV 156
+K+K V R ++++L+G+G++PDEL LELP TV+VMRERV+F+ LGLTI+DIN YPL+
Sbjct: 49 RKEKLVSRVIIFDYLKGLGIIPDELQDLELPSTVEVMRERVEFIQKLGLTIDDINQYPLI 108
Query: 157 LGCSVKK-----NMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGM 211
LGCSV + PV+ FL G+
Sbjct: 109 LGCSVLHASVIVELAPVIKFL------------------------------------RGL 132
Query: 212 DIRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGR 271
D+ +DI VL++YPELLGFKLEGTMSTSVAYL+ IGV R++G ++ +YP LGMRVG
Sbjct: 133 DVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVAQYPYFLGMRVGT 192
Query: 272 VIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIA 331
+IKPFV+YL +LG+P+ +AR++E R Y+LG+ L+E +KPNV L F +R+ LPSVIA
Sbjct: 193 MIKPFVDYLVNLGLPKKILARMLEKRAYLLGYVLEETMKPNVDCLISFGLRKECLPSVIA 252
Query: 332 QYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDC 391
QYP IIG L KL Q+ + L +D E F ++VEKMPQVVSL ++ V+FL
Sbjct: 253 QYPQIIGLPLTAKLSLQQYFYSLKLKIDSEGFAKVVEKMPQVVSLHQNVIMKPVEFLLGR 312
Query: 392 GFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKP 451
Q + M++ CPQL+AL + +MK ++ FF EMGRP+++L
Sbjct: 313 AIPLQDVASMVIKCPQLIALRVELMKNNYYFFKREMGRPVKEL----------------- 355
Query: 452 RHKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTIDMEEMEMEPSF 496
KG KCSL+WMLNCS ++FE+R+ + I E + PSF
Sbjct: 356 -----KSKGRKCSLNWMLNCSGQRFEERLQGNYIKTE--SICPSF 393
>Medtr4g070060.1 | transcription termination factor family protein |
HC | chr4:26370303-26365871 | 20130731
Length = 617
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 174/362 (48%), Gaps = 26/362 (7%)
Query: 130 VDVMRERVDFLHSLGLTIEDINNYPLVLGCSV----KKNMIPVLDFLGKLGVRKSTFTQF 185
++ +R RV++L S+ + E I + L G +V + ++D+L GVR+
Sbjct: 235 LESIRNRVEWLKSVLVKGEFIGDAMLKSGDNVLLRSDGELDEIVDYLEFNGVRREWMGYV 294
Query: 186 LQRYPQXXXXXXXXXXXXXXXXXE-GMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYL 244
+ R P+ + G+D + D ++ +P+ LG M+ V YL
Sbjct: 295 VSRCPKLLSYSLEEVKTRVQFYLDMGLDAK--DFGTMVFDFPKALGHYTLEEMNRKVDYL 352
Query: 245 IGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFG 304
G+ +++G +L P+++ + KP V+YL GI R + R++ +P +
Sbjct: 353 KEFGLESKDVGKLLAFRPQLMACSIEEQWKPLVKYLYYYGITRDGMRRMLTIKPMVFCVD 412
Query: 305 LDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFG 364
L+ + P VK ++ VR + ++ ++P ++ L +K+ R V+ ++ G
Sbjct: 413 LEMTIVPKVKFFQDLGVRNDGIAKMLVKFPTLLTYSLYKKI---RPVVIFLMT----KAG 465
Query: 365 RIVEKMPQVVSLSSGPLLM----------HVDFLKDCGFSSQQMGKMIVGCPQLLALDIN 414
E +P+V++L GP L+ +V + G QQ+G+MI P LL +I+
Sbjct: 466 VTEENIPKVIAL--GPELLGCSIVHKLEGNVKYYLSLGIRLQQLGEMIADFPMLLRYNID 523
Query: 415 IMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSNE 474
+++ + + M R L+D + FP FF+Y LE I PRHK++ + + L ML C++E
Sbjct: 524 VLRPKYTYLRKTMVRTLKDAIEFPRFFSYSLEGRIIPRHKVLVENQINVKLKCMLACTDE 583
Query: 475 KF 476
+F
Sbjct: 584 EF 585
>Medtr4g084630.1 | transcription termination factor family protein |
HC | chr4:32962573-32960937 | 20130731
Length = 332
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 139/268 (51%), Gaps = 4/268 (1%)
Query: 213 IRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRV 272
I+ +P ++ + P++L L + V L + E+ + ++P+IL V
Sbjct: 53 IQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEK 112
Query: 273 IKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSL-PSVIA 331
+ P + + ++LG+P + +++ P ++ + ++ K+ VK L + + + ++
Sbjct: 113 LCPLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMV 172
Query: 332 QYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMH-VDFLKD 390
+ P I+G + ++L L S+ L D + P ++S +L+H DFLK+
Sbjct: 173 KDPYIMGYSVDKRLRPTSEFLKSI-GLTEHDLQVLALNFPSILSRDVDKVLVHNYDFLKN 231
Query: 391 CGFSSQQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
CGF +Q+ ++VG P +L + N ++ F MGR +++++ +P FF +GL+ +
Sbjct: 232 CGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDVMGREVDEIIDYPCFFRHGLKKKL 291
Query: 450 KPRHKMVAKKGLKCSLSWMLNCSNEKFE 477
RHK++ K+ L CSLS ML+C+ +KF
Sbjct: 292 VSRHKLLKKRNLNCSLSEMLDCNEKKFH 319
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 135 ERVDFLHSLGLTIED----INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYP 190
E D+L ++G+ ++ P +L + + ++P+++ L L + + ++P
Sbjct: 43 ENWDYLKTIGIQERKLPSIVSKCPKILVLGLNEKIVPMVECLNTLATKPHEVASAIAKFP 102
Query: 191 QXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVG 250
Q + + + I ++L P L+ + +E M+ V +L +G+
Sbjct: 103 QILSCSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLASVGLD 162
Query: 251 RR-ELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKV 309
+ +G ++ + P I+G V + ++P E+L+S+G+ + L N P IL +D+ +
Sbjct: 163 KNGMIGKIMVKDPYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILSRDVDKVL 222
Query: 310 KPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
N L+ + + ++ YP I+ ++ L
Sbjct: 223 VHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSL 258
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 4/204 (1%)
Query: 150 INNYPLVLGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXE 209
I +P +L CSV++ + P+L F LGV + + L P+
Sbjct: 98 IAKFPQILSCSVEEKLCPLLAFFQTLGVPEKHIGKILLLNPRLISYSIETKMTEIVKFLA 157
Query: 210 GMDIRPND-IPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMR 268
+ + N I +++ + P ++G+ ++ + + +L IG+ +L + +P IL
Sbjct: 158 SVGLDKNGMIGKIMVKDPYIMGYSVDKRLRPTSEFLKSIGLTEHDLQVLALNFPSILSRD 217
Query: 269 VGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPS 328
V +V+ ++L++ G + L+ P IL + ++P +K L + R
Sbjct: 218 VDKVLVHNYDFLKNCGFQGRQIVDLVVGYPPILIKSVRNSLEPRIKFLVDVMGREV---D 274
Query: 329 VIAQYPDIIGTDLKQKLLNQRSVL 352
I YP LK+KL+++ +L
Sbjct: 275 EIIDYPCFFRHGLKKKLVSRHKLL 298
>Medtr2g034600.1 | transcription termination factor family protein |
HC | chr2:13233091-13236843 | 20130731
Length = 557
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ + ++ R+P + LEG + V + + +GV + ++ +LT+ P++ G+ + + +KP
Sbjct: 287 DQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKP 346
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPD 335
+++ ESLG+ + A++I P +L + +K+ ++ L EF V ++ ++ + P
Sbjct: 347 TMKFFESLGVDKEQWAKVIYRFPALLTYS-TQKINESLDFLREFGVSEENIGKILTRCPT 405
Query: 336 IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHV-DFLKDCGFS 394
I+ ++ L S+ D G ++ PQ LS + V F + G++
Sbjct: 406 IVSYSVEDNLRPTAMYFRSL----GVDVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYT 461
Query: 395 SQQMGKMI--VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
+++G MI G +L N+M +D+F + M P +LV FP FF Y LE IKPR
Sbjct: 462 MEEIGIMIKRYGMLYTFSLTENLMP-KWDYF-LTMDYPKSELVKFPQFFGYSLEQRIKPR 519
Query: 453 HKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTIDME 488
+ V G++ L+ +L+ S+ FE+ + + M+
Sbjct: 520 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQ 555
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 59/314 (18%)
Query: 101 AVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINN----YPLV 156
AV +KV R G+ P E + +R + +L LG+ + + + +P
Sbjct: 250 AVDSKKVKAVSRVSGIDPAEGN----------LRPHIAYLMELGMNTDQVRSIMRRFPAF 299
Query: 157 LGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPN 216
S++ + PV++F +LGV K L + PQ E + +
Sbjct: 300 AYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKE 359
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
+V+ R+P LL + + ++ S+ +L GV +G +LTR P I+ V ++P
Sbjct: 360 QWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPT 418
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVK-------SLEE----------- 318
Y SLG+ V L+ N P G ++ +KP + ++EE
Sbjct: 419 AMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGML 475
Query: 319 --FNVRRTSLP------------SVIAQYPDIIGTDLKQ---------KLLNQRSVLNSV 355
F++ +P S + ++P G L+Q K+ R +LN V
Sbjct: 476 YTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYTRVKISGVRLLLNQV 535
Query: 356 LDLDPEDFGRIVEK 369
L L +F I+ K
Sbjct: 536 LSLSSSNFEEILRK 549
>Medtr2g034600.3 | transcription termination factor family protein |
HC | chr2:13233799-13236843 | 20130731
Length = 496
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ + ++ R+P + LEG + V + + +GV + ++ +LT+ P++ G+ + + +KP
Sbjct: 226 DQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKP 285
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPD 335
+++ ESLG+ + A++I P +L + +K+ ++ L EF V ++ ++ + P
Sbjct: 286 TMKFFESLGVDKEQWAKVIYRFPALLTYS-TQKINESLDFLREFGVSEENIGKILTRCPT 344
Query: 336 IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHV-DFLKDCGFS 394
I+ ++ L S+ D G ++ PQ LS + V F + G++
Sbjct: 345 IVSYSVEDNLRPTAMYFRSL----GVDVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYT 400
Query: 395 SQQMGKMI--VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
+++G MI G +L N+M +D+F + M P +LV FP FF Y LE IKPR
Sbjct: 401 MEEIGIMIKRYGMLYTFSLTENLMP-KWDYF-LTMDYPKSELVKFPQFFGYSLEQRIKPR 458
Query: 453 HKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTIDME 488
+ V G++ L+ +L+ S+ FE+ + + M+
Sbjct: 459 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQ 494
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 59/314 (18%)
Query: 101 AVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINN----YPLV 156
AV +KV R G+ P E + +R + +L LG+ + + + +P
Sbjct: 189 AVDSKKVKAVSRVSGIDPAEGN----------LRPHIAYLMELGMNTDQVRSIMRRFPAF 238
Query: 157 LGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPN 216
S++ + PV++F +LGV K L + PQ E + +
Sbjct: 239 AYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKE 298
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
+V+ R+P LL + + ++ S+ +L GV +G +LTR P I+ V ++P
Sbjct: 299 QWAKVIYRFPALLTYSTQK-INESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPT 357
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVK-------SLEE----------- 318
Y SLG+ V L+ N P G ++ +KP + ++EE
Sbjct: 358 AMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGML 414
Query: 319 --FNVRRTSLP------------SVIAQYPDIIGTDLKQ---------KLLNQRSVLNSV 355
F++ +P S + ++P G L+Q K+ R +LN V
Sbjct: 415 YTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYTRVKISGVRLLLNQV 474
Query: 356 LDLDPEDFGRIVEK 369
L L +F I+ K
Sbjct: 475 LSLSSSNFEEILRK 488
>Medtr2g034600.2 | transcription termination factor family protein |
HC | chr2:13233091-13236856 | 20130731
Length = 561
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 141/276 (51%), Gaps = 10/276 (3%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ + ++ R+P + LEG + V + + +GV + ++ +LT+ P++ G+ + + +KP
Sbjct: 291 DQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKP 350
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPD 335
+++ ESLG+ + A++I P +L + +K+ ++ L EF V ++ ++ + P
Sbjct: 351 TMKFFESLGVDKEQWAKVIYRFPALLTYS-TQKINESLDFLREFGVSEENIGKILTRCPT 409
Query: 336 IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHV-DFLKDCGFS 394
I+ ++ L S+ D G ++ PQ LS + V F + G++
Sbjct: 410 IVSYSVEDNLRPTAMYFRSL----GVDVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYT 465
Query: 395 SQQMGKMI--VGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
+++G MI G +L N+M +D+F + M P +LV FP FF Y LE IKPR
Sbjct: 466 MEEIGIMIKRYGMLYTFSLTENLMP-KWDYF-LTMDYPKSELVKFPQFFGYSLEQRIKPR 523
Query: 453 HKMVAKKGLKCSLSWMLNCSNEKFEQRMDYDTIDME 488
+ V G++ L+ +L+ S+ FE+ + + M+
Sbjct: 524 YTRVKISGVRLLLNQVLSLSSSNFEEILRKKIMKMQ 559
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 125/314 (39%), Gaps = 59/314 (18%)
Query: 101 AVMREKVYEFLRGIGVVPDELDGLELPVTVDVMRERVDFLHSLGLTIEDINN----YPLV 156
AV +KV R G+ P E + +R + +L LG+ + + + +P
Sbjct: 254 AVDSKKVKAVSRVSGIDPAEGN----------LRPHIAYLMELGMNTDQVRSIMRRFPAF 303
Query: 157 LGCSVKKNMIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPN 216
S++ + PV++F +LGV K L + PQ E + +
Sbjct: 304 AYYSLEGKIKPVVEFFLELGVPKEKIIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKE 363
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
+V+ R+P LL + + ++ S+ +L GV +G +LTR P I+ V ++P
Sbjct: 364 QWAKVIYRFPALLTYSTQ-KINESLDFLREFGVSEENIGKILTRCPTIVSYSVEDNLRPT 422
Query: 277 VEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVK-------SLEE----------- 318
Y SLG+ V L+ N P G ++ +KP + ++EE
Sbjct: 423 AMYFRSLGV---DVGLLLFNCPQNFGLSIEANIKPVTQFFLERGYTMEEIGIMIKRYGML 479
Query: 319 --FNVRRTSLP------------SVIAQYPDIIGTDLKQ---------KLLNQRSVLNSV 355
F++ +P S + ++P G L+Q K+ R +LN V
Sbjct: 480 YTFSLTENLMPKWDYFLTMDYPKSELVKFPQFFGYSLEQRIKPRYTRVKISGVRLLLNQV 539
Query: 356 LDLDPEDFGRIVEK 369
L L +F I+ K
Sbjct: 540 LSLSSSNFEEILRK 553
>Medtr6g003960.1 | transcription termination factor family protein |
HC | chr6:35948-29152 | 20130731
Length = 609
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 163/384 (42%), Gaps = 52/384 (13%)
Query: 141 HSLGLTIEDINNYPLVLGCSVKKNMIPVLDFLGKLGVRK----------STFTQFLQRYP 190
H L I++I L S+ ++M F K+ R+ + F F++ +P
Sbjct: 208 HHYQLLIKNIRLIMTHLSISLDEDMQHTFSFFEKVQARRGGLNILASQDAAFRCFIESFP 267
Query: 191 QXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVG 250
+ + + I + IP ++ +P +L + +E + T V L I
Sbjct: 268 RILLLSLNNHISPTLDILQNIGIPADRIPNIILAFPPILLWNVE-LLQTRVLALNQIDGV 326
Query: 251 RRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYILGFGLDEKVK 310
++ ++ +YP +L + K + +L S+ +P+ R I+ +P +LG K+K
Sbjct: 327 DKDYAKLMLKYPWVLSTSIQENYKEVLAFLHSVKVPKTWTDRAIKRQPQLLGCS-TSKLK 385
Query: 311 PNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKM 370
V E V+R L VI + P ++ + L Q + + D E+ GRI+ +
Sbjct: 386 LMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFL--QVVMFFENMGFDKENIGRILARC 443
Query: 371 PQVVSLS-SGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDIN---------IMKL-- 418
P++ + S S L ++FL S + +I P+LL DIN MK+
Sbjct: 444 PEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMKVGL 503
Query: 419 --------------------------SFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
+F M RP+ D+V +P +F+Y LE IKPR
Sbjct: 504 SEKEIALMVRKFSPLLGYSIKEVLMPKLEFLVNSMKRPVRDVVRYPRYFSYSLEKKIKPR 563
Query: 453 HKMVAKKGLKCSLSWMLNCSNEKF 476
++++ + ++CSL ML ++E+F
Sbjct: 564 YRVLKGRNIECSLKDMLAKNDEEF 587
>Medtr5g094610.1 | transcription termination factor family protein |
HC | chr5:41344877-41348219 | 20130731
Length = 503
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 43/328 (13%)
Query: 165 MIPVLDFLGKLGVRKSTFTQFLQRYPQXXXXXXXXXXXXXXXXXEGMDIRPNDIPRVLER 224
+P+LD+L G+++S F Q +R+ M ++ ER
Sbjct: 191 WLPLLDYLSTFGIKESQFIQIYERH---------------------MSSFQINVCSAQER 229
Query: 225 YPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLG 284
+ YL+ +GV +++ +L R P+IL V +K V +L LG
Sbjct: 230 ----------------IDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLG 273
Query: 285 IPRLAVARLIENRPYILGFGLDEKVKPNVKSL-EEFNVRRTSLPSVIAQYPDIIGTDLKQ 343
+P + ++I + P + + +++ +KP V+ L EE ++ L VI P I+ +
Sbjct: 274 VPSTKIGQIIASTPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDI 333
Query: 344 KLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLS-SGPLLMHVDFLKDCGFSSQQMGKMI 402
+ LN LD E ++V K PQ++ S LL ++FL+ G + + K++
Sbjct: 334 SWNTRLMFLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKIL 393
Query: 403 VGCPQLLALDINI-MKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVA--KK 459
Q+L+L + +K + + E+ ++ L +P + + L+ I+PRHK + KK
Sbjct: 394 TSLTQVLSLSLEANLKPKYLYLVNELHNEVQTLTKYPMYLSLSLDQRIRPRHKFLVSLKK 453
Query: 460 GLKCSLSW-MLNCSNEKFEQRMDYDTID 486
K L ++E F QR T+D
Sbjct: 454 APKGPFPLGSLVPTDESFCQRWAGTTLD 481
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 128 VTVDVMRERVDFLHSLGLTIEDINN----YPLVLGCSVKKNMIPVLDFLGKLGVRKSTFT 183
+ V +ER+D+L SLG+ +DI P +L +V+ N+ + FL LGV +
Sbjct: 221 INVCSAQERIDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIG 280
Query: 184 QFLQRYPQXXXXXXXXXXX-XXXXXXEGMDIRPNDIPRVLERYPELLGFKLEGTMSTSVA 242
Q + P E + I+ D+ +V++ P++L +++ + +T +
Sbjct: 281 QIIASTPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRLM 340
Query: 243 YLIG-IGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYIL 301
+L + + + ++T++P++L + + P + +L S+G+ + +++ + +L
Sbjct: 341 FLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVL 400
Query: 302 GFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKL 345
L+ +KP K L N + + +YP + L Q++
Sbjct: 401 SLSLEANLKP--KYLYLVNELHNEV-QTLTKYPMYLSLSLDQRI 441
>Medtr2g067230.1 | transcription termination factor family protein |
HC | chr2:28121064-28123893 | 20130731
Length = 328
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 116/262 (44%), Gaps = 44/262 (16%)
Query: 221 VLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYL 280
++E +P+L+ L+ ST V Y+ G+ E ++ PEIL +V +I F
Sbjct: 86 LIENHPKLVTASLDDIKST-VKYITGMDFSSIEFRRLVGMCPEILTTKVSDIIPVFTFLH 144
Query: 281 ESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTD 340
+ + + +I RP ++ +D++++P + L+ + + ++ ++
Sbjct: 145 REVRVIGSNIKHVINRRPRLIICNVDKQLRPTMYFLQSIGIEE------VNKHTHLLSCS 198
Query: 341 LKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGK 400
++ K + + +++ K+ GFS +
Sbjct: 199 VEDKFIPR------------------------------------IEYFKNIGFSRRDTTS 222
Query: 401 MIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKK 459
M PQL I N ++ +++F +EMGR L+++ FP +F++ LE+ IKPRHK +
Sbjct: 223 MFRRFPQLFCYSIKNNLEPKYNYFVVEMGRDLKEVKEFPHYFSFSLENRIKPRHKRCVEM 282
Query: 460 GLKCSLSWMLNCSNEKFEQRMD 481
G+ L +L S F+ R++
Sbjct: 283 GVCFPLPLLLKTSEVTFQNRLE 304
>Medtr2g049780.1 | transcription termination factor family protein |
HC | chr2:22364848-22363786 | 20130731
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 41/264 (15%)
Query: 217 DIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPF 276
D + L + P L LE S + +L+ G+ ++L + P+IL + + P
Sbjct: 82 DSGKALSQNPNLHTATLESIHSI-ITFLVSKGIQHKDLPRIFGMCPKILTSSIKTDLNPV 140
Query: 277 VEYL-ESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPD 335
++L L +P + ++I+ P +L + +++KP + L +R
Sbjct: 141 FDFLIHDLKVPDHSFRKVIKKCPRLLTSSVVDQLKPALFYLNRLGLR------------- 187
Query: 336 IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSS 395
DL + L Q VL +V + + + P L H++ L GF+
Sbjct: 188 ----DL-EALAYQDCVL-------------LVSNVERTII----PKLKHLESL---GFTK 222
Query: 396 QQMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHK 454
++ M++ CP LL I N + F++F +EM LE+L FP +F++ LE+ IK RH
Sbjct: 223 EEARCMVLRCPALLTFSIENNFQPKFEYFSVEMKGKLEELKEFPQYFSFSLENRIKVRHM 282
Query: 455 MVAKKGLKCSLSWMLNCSNEKFEQ 478
V + G+ LS ML ++++F +
Sbjct: 283 EVVESGINLPLSLMLKSTDDEFRE 306
>Medtr5g041630.1 | transcription termination factor family protein |
HC | chr5:18278077-18276642 | 20130731
Length = 308
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 104/240 (43%), Gaps = 40/240 (16%)
Query: 236 TMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYL-ESLGIPRLAVARLI 294
T+ + L IG+ R ++G +L PE+L I P +++L + IP V + I
Sbjct: 88 TLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKSI 147
Query: 295 ENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDLKQKLLNQRSVLNS 354
P +L ++ +++P + L E +G L Q ++L
Sbjct: 148 LRCPRLLVSSVENRLRPALCFLRE------------------LGFVGPHSLTCQTTLL-- 187
Query: 355 VLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGFSSQQMGKMIVGCPQLLALDIN 414
+VS LL V+FL GF+ ++ M+V P LL ++
Sbjct: 188 ------------------LVSSVEDTLLPKVEFLMGLGFTRVEVSNMVVRSPGLLTFSVD 229
Query: 415 I-MKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKMVAKKGLKCSLSWMLNCSN 473
+ F+FF EM + +L FP +F++ LE IKPRH M+ + GL SL ML S+
Sbjct: 230 KNLAPKFEFFLKEMNGDVAELKRFPQYFSFSLEGRIKPRHAMLVRLGLSLSLQEMLQISD 289
>Medtr7g081270.1 | transcription termination factor family protein |
HC | chr7:31009132-31008262 | 20130731
Length = 284
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 114/261 (43%), Gaps = 12/261 (4%)
Query: 221 VLERYPELLGF-KLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEY 279
V RYP G+ K T + ++ YL + + +P+ + I + +
Sbjct: 26 VPNRYPNRNGYIKFRTTYNENLHYLKALTIINPNTKPNNLPHPDTINH-----ILTIITF 80
Query: 280 LESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPS--VIAQYPDII 337
L+S + RL+ + P++ + V + ++ + S +I + P+++
Sbjct: 81 LKSHSFTEADIPRLVHHSPHLFTTSISPTSLSPVFTFLASDLLASVEDSHGLILRCPNLL 140
Query: 338 GTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDC-GFSSQ 396
TD+ L L ++ + R + +++ + M V FL++ GF+ +
Sbjct: 141 FTDVNHILKPTLHFLRE--EVGVSNLNRPTNRNAHLLNTRVEKMRMRVRFLEEVVGFTYE 198
Query: 397 QMGKMIVGCPQLLALDI-NIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRHKM 455
+ + P +L D+ N + F + EM R +E+L FP FF + L+ I PRH
Sbjct: 199 EARNVCARLPAILGYDVENNLWPKFVYLVKEMEREVEELKKFPQFFGFSLDKRIVPRHLH 258
Query: 456 VAKKGLKCSLSWMLNCSNEKF 476
+ ++G++ L+ ML +EKF
Sbjct: 259 LKERGVRIPLNRMLMWGDEKF 279
>Medtr8g081000.2 | transcription termination factor family protein |
LC | chr8:34984986-34982125 | 20130731
Length = 400
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 31/246 (12%)
Query: 241 VAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYI 300
+ + IG + ++ ++ + ++L +V + +KP VE + LG + + P I
Sbjct: 93 INFFKQIGFSQTQIHSIIHQRTQVLFSKVDKTLKPKVELFQQLGFQGSQLGHFLSKNPNI 152
Query: 301 LGFGLDEKVKPNVKSLEEFNVRRTSLPSVIA-------QY------------PDIIGTDL 341
L L++ + P+V+ +++F L V+ QY I+G +
Sbjct: 153 LIASLNKTLVPSVEVIKKFVRNEKDLNRVLYKCGWILPQYRLFVANIAFLESCGIVGNQV 212
Query: 342 ------KQKLLNQ-----RSVLNSVLDLD-PEDFGRIVEKMPQVVSLSSGPLLMHVDFLK 389
++L + R+ ++ DL P++ +V + + LS +DF++
Sbjct: 213 LIILKCYSRILIEPQSRIRNYISQAEDLGFPQNSRMLVHALHTLYCLSHKTFEKKLDFIQ 272
Query: 390 DCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
GFS Q +M P LL +K+ +FF + P LV+ PA Y +E +
Sbjct: 273 HFGFSKDQSLRMFKHVPALLRSSEKKLKVGIEFFLHTVMLPKSTLVSQPAILMYSMEDRV 332
Query: 450 KPRHKM 455
PR ++
Sbjct: 333 FPRFRV 338
>Medtr8g081000.1 | transcription termination factor family protein |
LC | chr8:34984986-34983259 | 20130731
Length = 391
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 31/246 (12%)
Query: 241 VAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYI 300
+ + IG + ++ ++ + ++L +V + +KP VE + LG + + P I
Sbjct: 93 INFFKQIGFSQTQIHSIIHQRTQVLFSKVDKTLKPKVELFQQLGFQGSQLGHFLSKNPNI 152
Query: 301 LGFGLDEKVKPNVKSLEEFNVRRTSLPSVIA-------QY------------PDIIGTDL 341
L L++ + P+V+ +++F L V+ QY I+G +
Sbjct: 153 LIASLNKTLVPSVEVIKKFVRNEKDLNRVLYKCGWILPQYRLFVANIAFLESCGIVGNQV 212
Query: 342 ------KQKLLNQ-----RSVLNSVLDLD-PEDFGRIVEKMPQVVSLSSGPLLMHVDFLK 389
++L + R+ ++ DL P++ +V + + LS +DF++
Sbjct: 213 LIILKCYSRILIEPQSRIRNYISQAEDLGFPQNSRMLVHALHTLYCLSHKTFEKKLDFIQ 272
Query: 390 DCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
GFS Q +M P LL +K+ +FF + P LV+ PA Y +E +
Sbjct: 273 HFGFSKDQSLRMFKHVPALLRSSEKKLKVGIEFFLHTVMLPKSTLVSQPAILMYSMEDRV 332
Query: 450 KPRHKM 455
PR ++
Sbjct: 333 FPRFRV 338
>Medtr8g081000.3 | transcription termination factor family protein |
LC | chr8:34984986-34982260 | 20130731
Length = 410
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 104/246 (42%), Gaps = 31/246 (12%)
Query: 241 VAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKPFVEYLESLGIPRLAVARLIENRPYI 300
+ + IG + ++ ++ + ++L +V + +KP VE + LG + + P I
Sbjct: 93 INFFKQIGFSQTQIHSIIHQRTQVLFSKVDKTLKPKVELFQQLGFQGSQLGHFLSKNPNI 152
Query: 301 LGFGLDEKVKPNVKSLEEFNVRRTSLPSVIA-------QY------------PDIIGTDL 341
L L++ + P+V+ +++F L V+ QY I+G +
Sbjct: 153 LIASLNKTLVPSVEVIKKFVRNEKDLNRVLYKCGWILPQYRLFVANIAFLESCGIVGNQV 212
Query: 342 ------KQKLLNQ-----RSVLNSVLDLD-PEDFGRIVEKMPQVVSLSSGPLLMHVDFLK 389
++L + R+ ++ DL P++ +V + + LS +DF++
Sbjct: 213 LIILKCYSRILIEPQSRIRNYISQAEDLGFPQNSRMLVHALHTLYCLSHKTFEKKLDFIQ 272
Query: 390 DCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTI 449
GFS Q +M P LL +K+ +FF + P LV+ PA Y +E +
Sbjct: 273 HFGFSKDQSLRMFKHVPALLRSSEKKLKVGIEFFLHTVMLPKSTLVSQPAILMYSMEDRV 332
Query: 450 KPRHKM 455
PR ++
Sbjct: 333 FPRFRV 338
>Medtr3g092710.1 | plastid transcriptionally active 15 protein | HC
| chr3:42360298-42362077 | 20130731
Length = 506
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 118/265 (44%), Gaps = 24/265 (9%)
Query: 224 RYPELLGFKLEGTMSTSVAYLIGIGVGRRE-LGGVLTRYPEILGMRVGRVIKPFVEYLES 282
++P +L L + + L + G + +G VL R+P IL V ++ +++L
Sbjct: 239 KHPVILNCDLHNQLIPRIRVLTALSGGDEDSIGKVLNRFPIILNYSVEH-LEEHIKFLRC 297
Query: 283 LG-IPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYPDIIGTDL 341
+ + +++ P I + K++P ++ L+E + + ++ + +
Sbjct: 298 FADLDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADEIFKLLTKAALFLSISF 357
Query: 342 KQKLLNQRSVLNSV--------LDLDPEDFGRI-VEKMPQVVSLSSGPLLMHVDFLKDCG 392
+ L + VL + L + RI E M ++VSL FL + G
Sbjct: 358 RSNLAYKLGVLVKIGYKYRTKELAVAIAASTRISCENMQKMVSL----------FL-NYG 406
Query: 393 FSSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPR 452
FS + + M PQ+L ++ D+ EM R +++L+ FPA+ Y L+ IK R
Sbjct: 407 FSLEDIFAMSKKHPQILQYHHASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHR 466
Query: 453 HKMVAK-KGLKCSLSWMLNCSNEKF 476
+++ +G + S++ +L S+E F
Sbjct: 467 YEIKKDLRGEQMSINKLLTVSSENF 491
>Medtr4g120380.2 | mTERF protein | LC | chr4:49903904-49906039 |
20130731
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 18/272 (6%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ I ++ + P L+ + T+ +L G +++ +TR P L + + I P
Sbjct: 92 HQIQTIIRKIPLLIVYNPIKTILPKFQFLASKGASPKDIVATVTRSPNFLCSSLDKNIIP 151
Query: 276 FVEYLESLG-IPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEFNVRRTSLPSVIAQYP 334
E + S A+ +I I D + KPN++ L +F V R+S+ ++ P
Sbjct: 152 SFELVRSFCPSDHKAITSVIICPSSIC----DSRFKPNLQFLLDFGVTRSSIYRLLTSRP 207
Query: 335 D-IIGTDLKQKLLNQRSVLNSVLDLDPEDFGRIVEKMPQVVSLSSGPLLMHVDFLKDCGF 393
I TDLK+ L + L P + V + + +++ VD LK G
Sbjct: 208 STICCTDLKKALEEIKE-----LGFQPSKYNFCVALLAKR-AVTKSQWDAKVDVLKSWGC 261
Query: 394 SSQQMGKMIVGCPQLLALDINIMKLSFDFFHMEMGRPLEDLVTFPAFFTYGLESTIKPRH 453
S + P + + + F+ E+G L+ P F Y ++ + PR
Sbjct: 262 SEDAVFNAFRKQPNFMLRSPDKLNAVMSFWVEELGWDPSLLLAEPTLFGYSIQKRLSPRA 321
Query: 454 KMVA---KKGLK---CSLSWMLNCSNEKFEQR 479
+V KGL SL ++E F++R
Sbjct: 322 SIVKYLLSKGLMKEGASLCTPFYLTDENFQRR 353
>Medtr2g437200.1 | mTERF protein | LC | chr2:14551849-14553616 |
20130731
Length = 398
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 32/268 (11%)
Query: 216 NDIPRVLERYPELLGFKLEGTMSTSVAYLIGIGVGRRELGGVLTRYPEILGMRVGRVIKP 275
+ I V++R P LL + + +L+ IG ++ ++ P+ L + +
Sbjct: 80 SHIRNVIKREPWLLSCDTQKRILPKFQFLLSIGASSSDIVHMVRCNPKFLELSLKNNQIK 139
Query: 276 FVEYLESLGIPRLAVARLIENRPYILGFGLDEKVKPNVKSLEEF-NVRRTSLPSVI---- 330
F EY S G + L+ + P IL LD+++ P + L F + ++ +I
Sbjct: 140 F-EYFLSKGASSSHIISLLTSNPQILQSSLDKRIIPLFELLRMFFKTNKDTIVCLIRHSK 198
Query: 331 --AQYPD---IIGTDLKQKLLNQRSVLNSVLDLDPEDFGR--IVEKMPQVVSLSSGPLLM 383
A YP + +L SV+ +L + P F +++ + +V L P +
Sbjct: 199 WVASYPHHLIVANINLMSDFGVSHSVIARLLQIKPSIFCSKDLIKSLEEVKGLGFHPPIT 258
Query: 384 -------------------HVDFLKDCGFSSQQMGKMIVGCPQLLALDINIMKLSFDFFH 424
VD K G+S + + + G P LL I+ + L F+
Sbjct: 259 TFGAALIAKKGMSKKLWDEKVDVFKKWGWSDEDVIRAFRGRPDLLLTSIDKINLVMSFWV 318
Query: 425 MEMGRPLEDLVTFPAFFTYGLESTIKPR 452
++G L P F+Y LE I PR
Sbjct: 319 NQLGWDSLALAKRPHIFSYSLEKRIIPR 346