Miyakogusa Predicted Gene

Lj2g3v2184490.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2184490.2 Non Characterized Hit- tr|E1Z7D2|E1Z7D2_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,37.25,0.0000000004, ,CUFF.38740.2
         (145 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g068660.1 | hypothetical protein | HC | chr5:29080068-2908...   260   3e-70
Medtr3g093320.1 | hypothetical protein | HC | chr3:42648775-4264...   173   4e-44

>Medtr5g068660.1 | hypothetical protein | HC |
           chr5:29080068-29083036 | 20130731
          Length = 147

 Score =  260 bits (665), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 127/147 (86%), Positives = 135/147 (91%), Gaps = 2/147 (1%)

Query: 1   MEVYGKSVVEAPSNVIYLSSILGQDGPIPVHKCNWKCENERVCGNMFRCKITGLTHICDK 60
           MEVYGKS+V APSNVIYLSSILG DGP PVHKC+WKC+NE V GNMFRCK+TGLTHICDK
Sbjct: 1   MEVYGKSMVAAPSNVIYLSSILGHDGPSPVHKCDWKCQNESVWGNMFRCKLTGLTHICDK 60

Query: 61  NCNQRIVYDNHSSLCLASGQMFPLTLVEEQAVRGVRRKLD-AENSPVD-NGGCKRRRDAQ 118
           NCNQRI+YDNHSSLCLAS Q+FPLT  EEQAVRGVRRKLD AE+S VD NGGCKRRRDAQ
Sbjct: 61  NCNQRILYDNHSSLCLASRQIFPLTPTEEQAVRGVRRKLDAAESSHVDNNGGCKRRRDAQ 120

Query: 119 FHPSPFERSFSAVSPICSQVGDGMDLN 145
           FHPSPFERSF+AVSPICSQVGDGMD N
Sbjct: 121 FHPSPFERSFTAVSPICSQVGDGMDTN 147


>Medtr3g093320.1 | hypothetical protein | HC |
           chr3:42648775-42649216 | 20130731
          Length = 119

 Score =  173 bits (439), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 93/145 (64%), Positives = 102/145 (70%), Gaps = 26/145 (17%)

Query: 1   MEVYGKSVVEAPSNVIYLSSILGQDGPIPVHKCNWKCENERVCGNMFRCKITGLTHICDK 60
           MEVYGKSV  AP+N IYLSSIL     +P   C        V GNM+RCK+TGLTHICDK
Sbjct: 1   MEVYGKSVAAAPANAIYLSSIL-----VPKRTC-------FVFGNMYRCKLTGLTHICDK 48

Query: 61  NCNQRIVYDNHSSLCLASGQMFPLTLVEEQAVRGVRRKLDAENSPVDNGGCKRRRDAQFH 120
           NCNQRI+YDNHSSLC ASGQ+FPLT  EEQAVRGV   L               RD Q H
Sbjct: 49  NCNQRILYDNHSSLCRASGQIFPLTPTEEQAVRGVLGSLI--------------RDTQRH 94

Query: 121 PSPFERSFSAVSPICSQVGDGMDLN 145
           PSPFE+SFSAVSPICSQVGDGMD++
Sbjct: 95  PSPFEKSFSAVSPICSQVGDGMDMS 119