Miyakogusa Predicted Gene

Lj2g3v2184480.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2184480.1 Non Characterized Hit- tr|E1ZAR5|E1ZAR5_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,35.83,3e-16,RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP5,NULL;
OCTANOYLTRANSFERASE,NULL; RNase_P_Rpp14,Ribonuclease ,CUFF.38707.1
         (154 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g068650.1 | ribonuclease P/MRP protein subunit POP5, putat...   259   7e-70
Medtr5g068650.2 | ribonuclease P/MRP protein subunit POP5, putat...   259   7e-70

>Medtr5g068650.1 | ribonuclease P/MRP protein subunit POP5, putative
           | HC | chr5:29077104-29074343 | 20130731
          Length = 153

 Score =  259 bits (662), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 137/153 (89%)

Query: 2   VAFKNRYMVMEVFANPNNDQVGGDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQVK 61
           + FKNRYMVMEVF NPN DQ  GD +IITQFNV+ AIKDSILVNFGECGLA+SLGS QVK
Sbjct: 1   MVFKNRYMVMEVFMNPNKDQAAGDSIIITQFNVSNAIKDSILVNFGECGLAASLGSFQVK 60

Query: 62  YVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCEES 121
           YVNPITNVCIIR SRE+Y+ VWA+ITMVRSIGN+PV+FN+LDLSG+LQA K AALKCEE+
Sbjct: 61  YVNPITNVCIIRASREEYEKVWASITMVRSIGNFPVVFNLLDLSGNLQATKTAALKCEEA 120

Query: 122 KFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           KFEQ+KL VGDR S +DTHR+N++L +I+VLEH
Sbjct: 121 KFEQFKLMVGDRLSAEDTHRMNNHLAKIEVLEH 153


>Medtr5g068650.2 | ribonuclease P/MRP protein subunit POP5, putative
           | HC | chr5:29077104-29074343 | 20130731
          Length = 153

 Score =  259 bits (662), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 118/153 (77%), Positives = 137/153 (89%)

Query: 2   VAFKNRYMVMEVFANPNNDQVGGDPVIITQFNVTKAIKDSILVNFGECGLASSLGSLQVK 61
           + FKNRYMVMEVF NPN DQ  GD +IITQFNV+ AIKDSILVNFGECGLA+SLGS QVK
Sbjct: 1   MVFKNRYMVMEVFMNPNKDQAAGDSIIITQFNVSNAIKDSILVNFGECGLAASLGSFQVK 60

Query: 62  YVNPITNVCIIRTSREDYQHVWAAITMVRSIGNYPVMFNMLDLSGSLQACKKAALKCEES 121
           YVNPITNVCIIR SRE+Y+ VWA+ITMVRSIGN+PV+FN+LDLSG+LQA K AALKCEE+
Sbjct: 61  YVNPITNVCIIRASREEYEKVWASITMVRSIGNFPVVFNLLDLSGNLQATKTAALKCEEA 120

Query: 122 KFEQYKLKVGDRFSDDDTHRINSYLDRIKVLEH 154
           KFEQ+KL VGDR S +DTHR+N++L +I+VLEH
Sbjct: 121 KFEQFKLMVGDRLSAEDTHRMNNHLAKIEVLEH 153