Miyakogusa Predicted Gene

Lj2g3v2124900.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124900.1 Non Characterized Hit- tr|I1LG13|I1LG13_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7965
PE=,91.76,0,CRM1_C,CRM1 C-terminal domain; seg,NULL; ARM
repeat,Armadillo-type fold; CRM1 C terminal,CRM1 C-term,CUFF.38615.1
         (543 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007790.1 | chromosome region maintenance protein 1/export...   988   0.0  
Medtr4g077660.1 | chromosome region maintenance protein 1/export...   984   0.0  
Medtr4g077660.2 | chromosome region maintenance protein 1/export...   984   0.0  
Medtr8g013700.1 | chromosome region maintenance protein 1/export...   760   0.0  

>Medtr5g007790.1 | chromosome region maintenance protein 1/exportin |
            HC | chr5:1516370-1530958 | 20130731
          Length = 1078

 Score =  988 bits (2555), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 480/534 (89%), Positives = 500/534 (93%)

Query: 10   IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
            ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKC+RK
Sbjct: 545  VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCRRK 604

Query: 70   FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
            FVITQ+GENEPFVSELLSGLSTTI DLEPHQIHTFYESVGSM+QAESDSQKRDEYLQRLM
Sbjct: 605  FVITQVGENEPFVSELLSGLSTTIADLEPHQIHTFYESVGSMIQAESDSQKRDEYLQRLM 664

Query: 130  HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
             LPNQKW+EIIGQARQN DFLKD DVIRTVLN+LQTNTSVASSLGTYFLPQI+LIFLDML
Sbjct: 665  VLPNQKWMEIIGQARQNADFLKDQDVIRTVLNVLQTNTSVASSLGTYFLPQITLIFLDML 724

Query: 190  NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
            NVYRMYSELISKSIAEG P+ SRTS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 725  NVYRMYSELISKSIAEGTPFTSRTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 784

Query: 250  PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
            PMMDPVLGDYARNVPDARESEVLSLFATI+NKYKA+M+ED+P IFEAVFQCTLEMITKNF
Sbjct: 785  PMMDPVLGDYARNVPDARESEVLSLFATIINKYKASMIEDIPHIFEAVFQCTLEMITKNF 844

Query: 310  EDYPEHRLKFFSLLCAIATHCFHALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLLL 369
            EDYPEHRLKFFSLL AIATHCF ALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLLL
Sbjct: 845  EDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLLL 904

Query: 370  EMLKKFQATEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLAETGALT 429
            EML KFQA+EFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHL CLAE+GALT
Sbjct: 905  EMLNKFQASEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLLCLAESGALT 964

Query: 430  EPLWDAATNPYPYPSNAAFVLEYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFKNH 489
            EPLWDAATN YPYPSN AFV EYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFK H
Sbjct: 965  EPLWDAATNSYPYPSNGAFVREYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFKTH 1024

Query: 490  IRDFLVQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSVPGLIAPSELQDEMLDS 543
            IRDFL+QSKEFSAQDNKDLY              MLS+PGLIAP ELQDEM+DS
Sbjct: 1025 IRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPVELQDEMVDS 1078


>Medtr4g077660.1 | chromosome region maintenance protein 1/exportin |
            HC | chr4:29752243-29739549 | 20130731
          Length = 1077

 Score =  984 bits (2543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/534 (87%), Positives = 489/534 (91%)

Query: 10   IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
            ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 544  VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 603

Query: 70   FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
            FVITQ+GENEPFVSELLSGL  TI DLEPHQIH+FYESV  M+QAESDSQKRDE+LQRLM
Sbjct: 604  FVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLM 663

Query: 130  HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
             LPNQKW+EIIGQA QNVDFLKD DVIRTVLNILQTNTSVASSLGT+FLPQI++IFLDML
Sbjct: 664  ELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDML 723

Query: 190  NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
            NVYRMYSELISKSI EGGPYAS+TS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 724  NVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 783

Query: 250  PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
            PMMDPVLGDYARN PDARESEVLSLFATIVNKYKA M+EDVPRIFEAVFQCTLEMITKNF
Sbjct: 784  PMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNF 843

Query: 310  EDYPEHRLKFFSLLCAIATHCFHALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLLL 369
            EDYPEHRLKFFSLL AIATHCF ALICLSSQQLK VMDSI+WAFRHTERNIAETGLNLLL
Sbjct: 844  EDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIMWAFRHTERNIAETGLNLLL 903

Query: 370  EMLKKFQATEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLAETGALT 429
            EMLKKFQ +EFCNQFYRTYFLT E EIFAVLTDTFHKPGFKLHVLVLQHLFCL ETG LT
Sbjct: 904  EMLKKFQGSEFCNQFYRTYFLTTENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLT 963

Query: 430  EPLWDAATNPYPYPSNAAFVLEYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFKNH 489
            EPLWD AT+P  YPSNA FVLEYTIKLLS SFPNMT AEVTQFVNGLFESTNDLSTFK H
Sbjct: 964  EPLWDVATSPQSYPSNAVFVLEYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTH 1023

Query: 490  IRDFLVQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSVPGLIAPSELQDEMLDS 543
            IRDFL+QSKEFSAQDNKDLY              MLS+PGLIAP ELQDEM+DS
Sbjct: 1024 IRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS 1077


>Medtr4g077660.2 | chromosome region maintenance protein 1/exportin |
            HC | chr4:29752243-29739549 | 20130731
          Length = 1077

 Score =  984 bits (2543), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/534 (87%), Positives = 489/534 (91%)

Query: 10   IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
            ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 544  VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 603

Query: 70   FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
            FVITQ+GENEPFVSELLSGL  TI DLEPHQIH+FYESV  M+QAESDSQKRDE+LQRLM
Sbjct: 604  FVITQVGENEPFVSELLSGLPITIADLEPHQIHSFYESVAHMIQAESDSQKRDEFLQRLM 663

Query: 130  HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
             LPNQKW+EIIGQA QNVDFLKD DVIRTVLNILQTNTSVASSLGT+FLPQI++IFLDML
Sbjct: 664  ELPNQKWMEIIGQAHQNVDFLKDQDVIRTVLNILQTNTSVASSLGTFFLPQITMIFLDML 723

Query: 190  NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
            NVYRMYSELISKSI EGGPYAS+TS+VKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP
Sbjct: 724  NVYRMYSELISKSILEGGPYASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 783

Query: 250  PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
            PMMDPVLGDYARN PDARESEVLSLFATIVNKYKA M+EDVPRIFEAVFQCTLEMITKNF
Sbjct: 784  PMMDPVLGDYARNAPDARESEVLSLFATIVNKYKATMIEDVPRIFEAVFQCTLEMITKNF 843

Query: 310  EDYPEHRLKFFSLLCAIATHCFHALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLLL 369
            EDYPEHRLKFFSLL AIATHCF ALICLSSQQLK VMDSI+WAFRHTERNIAETGLNLLL
Sbjct: 844  EDYPEHRLKFFSLLRAIATHCFPALICLSSQQLKLVMDSIMWAFRHTERNIAETGLNLLL 903

Query: 370  EMLKKFQATEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLAETGALT 429
            EMLKKFQ +EFCNQFYRTYFLT E EIFAVLTDTFHKPGFKLHVLVLQHLFCL ETG LT
Sbjct: 904  EMLKKFQGSEFCNQFYRTYFLTTENEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLT 963

Query: 430  EPLWDAATNPYPYPSNAAFVLEYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFKNH 489
            EPLWD AT+P  YPSNA FVLEYTIKLLS SFPNMT AEVTQFVNGLFESTNDLSTFK H
Sbjct: 964  EPLWDVATSPQSYPSNAVFVLEYTIKLLSASFPNMTTAEVTQFVNGLFESTNDLSTFKTH 1023

Query: 490  IRDFLVQSKEFSAQDNKDLYXXXXXXXXXXXXXXMLSVPGLIAPSELQDEMLDS 543
            IRDFL+QSKEFSAQDNKDLY              MLS+PGLIAP ELQDEM+DS
Sbjct: 1024 IRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPIELQDEMVDS 1077


>Medtr8g013700.1 | chromosome region maintenance protein 1/exportin
           | HC | chr8:4198075-4201131 | 20130731
          Length = 932

 Score =  760 bits (1963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/489 (76%), Positives = 412/489 (84%), Gaps = 16/489 (3%)

Query: 9   NIVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKR 68
           +++ S   YVVG+YP+FLRAH KFLK V+NKLFEFMH +HP VQDMACDT LKIV+ C+R
Sbjct: 459 SVIASNIMYVVGEYPQFLRAHSKFLKAVMNKLFEFMHNTHPRVQDMACDTILKIVRNCRR 518

Query: 69  KFVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRL 128
           KFVITQ+GENEPFVSELLSGLSTTI DL+PHQIHTFYESVGSM+QAES+SQKRDEY  RL
Sbjct: 519 KFVITQVGENEPFVSELLSGLSTTIADLKPHQIHTFYESVGSMIQAESNSQKRDEYFLRL 578

Query: 129 MHLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDM 188
           M LPNQK LEIIGQA QNVDFLKD DVI+T LN LQTNT VASSLGTYFLPQ++LIF +M
Sbjct: 579 MVLPNQKLLEIIGQAGQNVDFLKDQDVIQTFLNTLQTNTRVASSLGTYFLPQMTLIFSNM 638

Query: 189 LNVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFV 248
           LNVYRMYSEL+SKSIAEGGP ASRT++VKL+RSVKRE LKLIETFLDKAE QPQIGKQFV
Sbjct: 639 LNVYRMYSELMSKSIAEGGPLASRTAYVKLVRSVKREILKLIETFLDKAEAQPQIGKQFV 698

Query: 249 PPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKN 308
           PPMMD VL DY +N+PDARESEVLSLFATI+NKYKA+M                 MIT+N
Sbjct: 699 PPMMDLVLRDYVKNMPDARESEVLSLFATIINKYKASM----------------NMITEN 742

Query: 309 FEDYPEHRLKFFSLLCAIATHCFHALICLSSQQLKFVMDSIIWAFRHTERNIAETGLNLL 368
           FEDYPEHRL  FSLL  IATHCF ALI LSS+QL FVMDSIIWAF HTE+NIAET L L 
Sbjct: 743 FEDYPEHRLNIFSLLRTIATHCFPALISLSSRQLMFVMDSIIWAFWHTEKNIAETVLKLS 802

Query: 369 LEMLKKFQATEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLAETGAL 428
           LEML KFQA++FCNQFYRTY LTIEQEIFAVL DT HK GFKLHVLVLQHLFCLA++GAL
Sbjct: 803 LEMLNKFQASKFCNQFYRTYILTIEQEIFAVLIDTLHKSGFKLHVLVLQHLFCLAKSGAL 862

Query: 429 TEPLWDAATNPYPYPSNAAFVLEYTIKLLSTSFPNMTAAEVTQFVNGLFESTNDLSTFKN 488
           TEPLWDA T  YPY SN AFV   TIKLLS+SFPN    EV QFV+ LF +TNDLSTFK 
Sbjct: 863 TEPLWDADTCSYPYQSNVAFVRIMTIKLLSSSFPNFDVMEVIQFVDKLFAATNDLSTFKT 922

Query: 489 HIRDFLVQS 497
           + +DFL+QS
Sbjct: 923 YTQDFLIQS 931