Miyakogusa Predicted Gene
- Lj2g3v2124850.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2124850.1 tr|G7K6I5|G7K6I5_MEDTR GTP pyrophosphokinase
OS=Medicago truncatula GN=MTR_5g007870 PE=4
SV=1,80,0,HD-domain/PDEase-like,NULL; Nucleotidyltransferase,NULL;
seg,NULL; HD_4,NULL; RelA_SpoT,RelA/SpoT; T,CUFF.38659.1
(860 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g007870.1 | RelA/SpoT-like protein RSH2 | HC | chr5:155877... 1382 0.0
Medtr8g020880.1 | RelA/SpoT-like protein RSH2 | HC | chr8:737042... 158 3e-38
Medtr8g020880.2 | RelA/SpoT-like protein RSH2 | HC | chr8:737042... 157 4e-38
Medtr7g108940.2 | RelA-SpoT-like protein RSH1 | HC | chr7:445310... 139 1e-32
Medtr7g108940.1 | RelA-SpoT-like protein RSH1 | HC | chr7:445310... 138 2e-32
Medtr4g123930.2 | Ca2+-activated RelA/SpoT-like protein | HC | c... 63 1e-09
Medtr4g123930.1 | Ca2+-activated RelA/SpoT-like protein | HC | c... 63 1e-09
Medtr4g123930.3 | Ca2+-activated RelA/SpoT-like protein | HC | c... 63 1e-09
Medtr4g123930.4 | Ca2+-activated RelA/SpoT-like protein | HC | c... 63 2e-09
>Medtr5g007870.1 | RelA/SpoT-like protein RSH2 | HC |
chr5:1558774-1571986 | 20130731
Length = 889
Score = 1382 bits (3578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 684/890 (76%), Positives = 729/890 (81%), Gaps = 35/890 (3%)
Query: 1 MSTTMLSCQRSSTMFARQTTSPFLHRFR--HFKLKPHRPRFRCLLDQIVAPSSSLTXXXX 58
M+T LSC+RS TM Q +SP L RFR + K KPHR RFRCLL QI SS+
Sbjct: 5 MNTHFLSCERS-TMLLHQNSSPLLRRFRFRYVKFKPHRSRFRCLLPQIAVQSSA----NV 59
Query: 59 XXXXXXXXXXXXXXXXXITQVAVTAFAIASGACLSTKVDFLWPKLEEQTGAIMQDGVDIT 118
I VAVTA AIASGACLSTKVDFLWPK +EQ G IMQDGVD+T
Sbjct: 60 IAAAAKAASVHGAVYSAINHVAVTAVAIASGACLSTKVDFLWPKPDEQPGTIMQDGVDVT 119
Query: 119 GYTIFDDEKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVA 178
GY IF D KVQKAIAFA KAH GQ+RKTG+PYL HCIHTGRILAALVPSSGKRAV+T+VA
Sbjct: 120 GYPIFTDAKVQKAIAFATKAHLGQIRKTGDPYLAHCIHTGRILAALVPSSGKRAVETIVA 179
Query: 179 GILHDVVDDACQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEA 238
GILHDVVDD CQSLQDIEAEFGDDV +LVAGVSRLSYINQLLRRHRRV+VNQGVLGQEEA
Sbjct: 180 GILHDVVDDTCQSLQDIEAEFGDDVAELVAGVSRLSYINQLLRRHRRVNVNQGVLGQEEA 239
Query: 239 SNLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLW 298
SNLR MLLGM+DDPRVVLIKLADRLHNMRTIYALP+ KAQAVAEETLIIWCSLASRLGLW
Sbjct: 240 SNLRGMLLGMIDDPRVVLIKLADRLHNMRTIYALPMHKAQAVAEETLIIWCSLASRLGLW 299
Query: 299 ALKSELEDLCFAVLQPQIFQKMRADLASMWSPSSRIGNPRRLSVKGNLIPSEENNSTSFD 358
ALK+ELEDLCFAVLQPQIFQ MRADLASMWSPS+RIG+ RL +KGNLIP E +STSF
Sbjct: 300 ALKAELEDLCFAVLQPQIFQSMRADLASMWSPSARIGSSGRLYLKGNLIPLAEKSSTSFY 359
Query: 359 NKSVTFKEDVSSMKDLLDAVVPFDILLDRRKRAKFLSTFGNNMETCMKPKVVLDAGLALA 418
NKS+ F E + SMKDLL+AVVPFD+LLDRRKRA FL + NN+ETC KPKVV DAGLALA
Sbjct: 360 NKSLAFNEGLCSMKDLLEAVVPFDVLLDRRKRANFLYSIANNVETCTKPKVVQDAGLALA 419
Query: 419 SLVICEEALERELIISASYVPGMEVTXXXXXXXXXXXXXXXXXXDISIDKVYDTRALRVV 478
SLVICEEALERELIISASYVPGMEVT D SIDKVYD RALRVV
Sbjct: 420 SLVICEEALERELIISASYVPGMEVTLSSRLKSLYSIYSKMKRKDTSIDKVYDARALRVV 479
Query: 479 VGDKKGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVQGPDNSP 538
VGDK G LHGPAV+CCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAV+GPDNSP
Sbjct: 480 VGDKNGALHGPAVQCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQSLHTAVEGPDNSP 539
Query: 539 LEVQIRTQRMHEYAEHGLAAHWLYKETGNPF----------------------------S 570
LEVQIRTQRMHEYAEHGLAAHWLYKETGNPF S
Sbjct: 540 LEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSSVDRMDTPETDASSSIDKMDAPETEASS 599
Query: 571 SIDRMDEPETEASSYFSKDIEEENSPDSLLGRYKSLKAGHPVLRVEGSHLLAAVIISVEN 630
SIDRMD PETEASSYFSKD E ENS D LL + KSLKAGHPVLRVEGSHLLAAVIISVEN
Sbjct: 600 SIDRMDTPETEASSYFSKDTEAENSSDILLSKNKSLKAGHPVLRVEGSHLLAAVIISVEN 659
Query: 631 DERNLLVAVSFGLPASEAVGDRRSSFQIKQWEAYAQLFKKVSDEWWFEPGHGDWFTCLEK 690
+ R LLVAVSF L AS+AV DRRS FQ K+WEAYA+L+KKVSDEWWFEPGHGDW TCLEK
Sbjct: 660 EARELLVAVSFQLAASDAVADRRSFFQDKRWEAYARLYKKVSDEWWFEPGHGDWCTCLEK 719
Query: 691 YTLCRDGMYHKQDQFGRLLPTFIQVINFTEEEESEYWDVVSAVFEGRPVDCITSRPKFDF 750
YTLCRDGMYHKQDQFGRLLPTF+QVINFTE+EESEYWDVVSAVFEG+ VDCI S+ K D
Sbjct: 720 YTLCRDGMYHKQDQFGRLLPTFVQVINFTEQEESEYWDVVSAVFEGKQVDCIASQSKLDL 779
Query: 751 VASTSVDASINNKVQLLRTMLSWEEQLRSEVSIKQIKQDAELYDLHGSLNLGEVVIICWP 810
V STS+DASINNKV LLRTMLSWEEQLRSEV+I Q K DA+ G LNLGEVV+ICWP
Sbjct: 780 VPSTSMDASINNKVHLLRTMLSWEEQLRSEVNINQTKHDAKFDGPRGPLNLGEVVVICWP 839
Query: 811 NGEIMRLKAGSTATDAALRVGLDGKLVLINGQLVLPNTKLKDGDVVEVRI 860
NGEIMRLKAGS+A DAA R GL+GKLVLING L LPNTKLKDGDV+EVRI
Sbjct: 840 NGEIMRLKAGSSAVDAAQRTGLEGKLVLINGHLALPNTKLKDGDVLEVRI 889
>Medtr8g020880.1 | RelA/SpoT-like protein RSH2 | HC |
chr8:7370427-7366192 | 20130731
Length = 726
Score = 158 bits (399), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 124/209 (59%), Gaps = 12/209 (5%)
Query: 120 YTIFDDEKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAG 179
+ IF +E V KA A KAHRGQMR +G+PYL HC+ T +LA + +S V AG
Sbjct: 215 HKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANS-----TVVAAG 269
Query: 180 ILHDVVDDACQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEAS 239
+LHD VDDA + I FG V LV GVS+LS++++L R + S + EA
Sbjct: 270 LLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSV------EAD 323
Query: 240 NLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWA 299
L M L M D R VLIKLADRLHNM T+ ALP+ K Q A+ETL I+ LA+RLG+
Sbjct: 324 RLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIAN 382
Query: 300 LKSELEDLCFAVLQPQIFQKMRADLASMW 328
K +LE+LCF L P +++ + L +
Sbjct: 383 WKDQLENLCFKHLNPVQHKELSSKLVESY 411
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 464 ISIDKVYDTRALRVVVGDKKGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSG 523
++ID ++D LR++V ++ CY L +VHRLW+ + G+ DYI PK +G
Sbjct: 456 LTIDDIHDIYGLRLIVDKEED---------CYKALKVVHRLWSEVHGKLKDYIRFPKFNG 506
Query: 524 YQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSS 571
YQSLHT V G PLEVQ+RT+ MH AE G AAHW YKE SS
Sbjct: 507 YQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSS 554
>Medtr8g020880.2 | RelA/SpoT-like protein RSH2 | HC |
chr8:7370427-7366669 | 20130731
Length = 682
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 124/209 (59%), Gaps = 12/209 (5%)
Query: 120 YTIFDDEKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAG 179
+ IF +E V KA A KAHRGQMR +G+PYL HC+ T +LA + +S V AG
Sbjct: 215 HKIFCEEFVIKAFCEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANS-----TVVAAG 269
Query: 180 ILHDVVDDACQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEAS 239
+LHD VDDA + I FG V LV GVS+LS++++L R + S + EA
Sbjct: 270 LLHDTVDDAFLTYDYIYGMFGAGVADLVEGVSKLSHLSKLARDNNTASKSV------EAD 323
Query: 240 NLRVMLLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWA 299
L M L M D R VLIKLADRLHNM T+ ALP+ K Q A+ETL I+ LA+RLG+
Sbjct: 324 RLHTMFLAMAD-ARAVLIKLADRLHNMMTLDALPVAKQQRFAKETLEIFAPLANRLGIAN 382
Query: 300 LKSELEDLCFAVLQPQIFQKMRADLASMW 328
K +LE+LCF L P +++ + L +
Sbjct: 383 WKDQLENLCFKHLNPVQHKELSSKLVESY 411
Score = 102 bits (254), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 9/108 (8%)
Query: 464 ISIDKVYDTRALRVVVGDKKGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSG 523
++ID ++D LR++V ++ CY L +VHRLW+ + G+ DYI PK +G
Sbjct: 456 LTIDDIHDIYGLRLIVDKEED---------CYKALKVVHRLWSEVHGKLKDYIRFPKFNG 506
Query: 524 YQSLHTAVQGPDNSPLEVQIRTQRMHEYAEHGLAAHWLYKETGNPFSS 571
YQSLHT V G PLEVQ+RT+ MH AE G AAHW YKE SS
Sbjct: 507 YQSLHTVVMGEGKVPLEVQVRTKDMHLQAEFGFAAHWRYKEDHCQLSS 554
>Medtr7g108940.2 | RelA-SpoT-like protein RSH1 | HC |
chr7:44531076-44538870 | 20130731
Length = 813
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 11/204 (5%)
Query: 126 EKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVV 185
E V A A KAH GQ R++GEP++ H + RIL L + +++ AG+LHD V
Sbjct: 146 ELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGEL-----ELDWESIAAGLLHDTV 200
Query: 186 DDA-CQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEASNLRVM 244
+D + + IE EFG V +V G +++S + +L ++ SV Q V +A +LR M
Sbjct: 201 EDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSV-QDV----KAEDLRQM 255
Query: 245 LLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKSEL 304
L M ++ RV+++KLADRLHNMRT+ +P K ++A ETL ++ LA LG++ +KSEL
Sbjct: 256 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSEL 315
Query: 305 EDLCFAVLQPQIFQKMRADLASMW 328
E+L F P+ + K++ +A ++
Sbjct: 316 ENLSFMYTNPEDYAKVKRRVADLF 339
>Medtr7g108940.1 | RelA-SpoT-like protein RSH1 | HC |
chr7:44531046-44540836 | 20130731
Length = 883
Score = 138 bits (348), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 123/204 (60%), Gaps = 11/204 (5%)
Query: 126 EKVQKAIAFARKAHRGQMRKTGEPYLTHCIHTGRILAALVPSSGKRAVDTVVAGILHDVV 185
E V A A KAH GQ R++GEP++ H + RIL L + +++ AG+LHD V
Sbjct: 146 ELVHNAFTLAFKAHDGQKRRSGEPFIIHPVEVARILGEL-----ELDWESIAAGLLHDTV 200
Query: 186 DDA-CQSLQDIEAEFGDDVVKLVAGVSRLSYINQLLRRHRRVSVNQGVLGQEEASNLRVM 244
+D + + IE EFG V +V G +++S + +L ++ SV Q V +A +LR M
Sbjct: 201 EDTDVVTFERIEEEFGATVRHIVEGETKVSKLGKLKYKNENDSV-QDV----KAEDLRQM 255
Query: 245 LLGMVDDPRVVLIKLADRLHNMRTIYALPLQKAQAVAEETLIIWCSLASRLGLWALKSEL 304
L M ++ RV+++KLADRLHNMRT+ +P K ++A ETL ++ LA LG++ +KSEL
Sbjct: 256 FLAMTEEVRVIIVKLADRLHNMRTLSHMPPHKQNSIAMETLQVFAPLAKLLGMYQIKSEL 315
Query: 305 EDLCFAVLQPQIFQKMRADLASMW 328
E+L F P+ + K++ +A ++
Sbjct: 316 ENLSFMYTNPEDYAKVKRRVADLF 339
>Medtr4g123930.2 | Ca2+-activated RelA/SpoT-like protein | HC |
chr4:51092297-51095636 | 20130731
Length = 450
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 467 DKVYDTRALRVVVGDK-KGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQ 525
+ V D LRVV+ K + + CY I+ +W I DYI PK +GY+
Sbjct: 202 EDVNDVLGLRVVLNPKSRENALEAGERACYRAHQIIQSMWKEIPSRTKDYISRPKGNGYR 261
Query: 526 SLHTAVQ----GPDNSPLEVQIRTQRMHEYAEHGLAAHWLYK 563
SLH AV G +E+QIRT M A G+A+H LYK
Sbjct: 262 SLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYK 303
>Medtr4g123930.1 | Ca2+-activated RelA/SpoT-like protein | HC |
chr4:51092297-51095636 | 20130731
Length = 580
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 467 DKVYDTRALRVVVGDK-KGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQ 525
+ V D LRVV+ K + + CY I+ +W I DYI PK +GY+
Sbjct: 332 EDVNDVLGLRVVLNPKSRENALEAGERACYRAHQIIQSMWKEIPSRTKDYISRPKGNGYR 391
Query: 526 SLHTAVQ----GPDNSPLEVQIRTQRMHEYAEHGLAAHWLYK 563
SLH AV G +E+QIRT M A G+A+H LYK
Sbjct: 392 SLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYK 433
>Medtr4g123930.3 | Ca2+-activated RelA/SpoT-like protein | HC |
chr4:51092297-51095636 | 20130731
Length = 455
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 467 DKVYDTRALRVVVGDK-KGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQ 525
+ V D LRVV+ K + + CY I+ +W I DYI PK +GY+
Sbjct: 332 EDVNDVLGLRVVLNPKSRENALEAGERACYRAHQIIQSMWKEIPSRTKDYISRPKGNGYR 391
Query: 526 SLHTAVQ----GPDNSPLEVQIRTQRMHEYAEHGLAAHWLYK 563
SLH AV G +E+QIRT M A G+A+H LYK
Sbjct: 392 SLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYK 433
>Medtr4g123930.4 | Ca2+-activated RelA/SpoT-like protein | HC |
chr4:51092297-51095636 | 20130731
Length = 325
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 467 DKVYDTRALRVVVGDK-KGTLHGPAVKCCYSLLDIVHRLWTPIDGEFDDYIINPKPSGYQ 525
+ V D LRVV+ K + + CY I+ +W I DYI PK +GY+
Sbjct: 202 EDVNDVLGLRVVLNPKSRENALEAGERACYRAHQIIQSMWKEIPSRTKDYISRPKGNGYR 261
Query: 526 SLHTAVQ----GPDNSPLEVQIRTQRMHEYAEHGLAAHWLYK 563
SLH AV G +E+QIRT M A G+A+H LYK
Sbjct: 262 SLHMAVDVSEIGRTRPLMEIQIRTTEMDRLAVGGMASHSLYK 303