Miyakogusa Predicted Gene

Lj2g3v2124820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124820.1 Non Characterized Hit- tr|J3L112|J3L112_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,49.56,8e-18,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP; no
description,NULL,CUFF.38604.1
         (623 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC | chr5...   705   0.0  
Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC | chr4...   414   e-115
Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC | chr8...   138   2e-32
Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC | chr8...   138   2e-32

>Medtr5g007980.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr5:1623285-1617399 | 20130731
          Length = 621

 Score =  705 bits (1819), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/606 (63%), Positives = 426/606 (70%), Gaps = 12/606 (1%)

Query: 1   MESPGSAAVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDAS 60
           M+  G  A DC VGS+VWVRRRNGSWWPGQI             PRSGTPVKLLGREDAS
Sbjct: 1   MDGEGLGAEDCAVGSLVWVRRRNGSWWPGQILDPDDLAASHLTSPRSGTPVKLLGREDAS 60

Query: 61  VDWYNLEKSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHAXXXXXXXXX 120
           VDWYNLEKSKRVKPFRCGEFDA IERAE+A GMPLKKREKYARREDAILHA         
Sbjct: 61  VDWYNLEKSKRVKPFRCGEFDASIERAETALGMPLKKREKYARREDAILHALELERQMLR 120

Query: 121 XXXXSGVVQMGPVFRAKRSRCMYLPAESSDSLDYKETLTNFPGSSSQPAGENPYXXXXXX 180
                G  Q+G  FRAKRS+C+YLP ESSDSLDY ETL + P SS    GE  Y      
Sbjct: 121 KQDKLGSGQIGAAFRAKRSKCVYLPPESSDSLDYNETLAHVPISSQ--LGEYAYGSSFAE 178

Query: 181 XXXXXFMXXXXXXXXXXXXXXXXXXXXXXXLDRDEETIILSETVGXXXXXXXXXXX---X 237
                F+                       LD DE+  I SET                 
Sbjct: 179 ESESAFLNDVESDSSETASIKSESDSSETELDNDEDMTIFSETDDDNEEQESTSSEEHDE 238

Query: 238 XXXLAISGDMPHLYRREPITCNEAVSKWQLKGKRNNRNLVKRSGVVSNRKDGVLHGADVE 297
              LA S DMPHLY REP TCNEAVSKWQLKGKRNNRNLVKRS   S+RKD VL+GAD+E
Sbjct: 239 LAELATSSDMPHLYPREPRTCNEAVSKWQLKGKRNNRNLVKRSVAASDRKDVVLYGADIE 298

Query: 298 GQRNHLN-MRSGSSLHYYRNDYSDVLDEHDQMFGLEDEYSPTPRAVAKKTHHDVDWDECA 356
           GQR+HLN  R G    YYRNDYSD LD+ DQMFG EDEY+ TPR VAK     +DWDE  
Sbjct: 299 GQRSHLNHKRMGPGYPYYRNDYSDALDDSDQMFGSEDEYTLTPREVAKS--QGLDWDEWP 356

Query: 357 WEDEPASRGYWDIKGFAPLYSDSYNSHGRNGPMLVDVDLKVQANASYRKNSVSFISITSE 416
           WED+PA + Y D KGFA L+SD Y+  G  G MLVDVDLKVQ  ASY K SV  +SITS+
Sbjct: 357 WEDQPALKEYSDFKGFASLHSDPYHYDGGKGSMLVDVDLKVQ--ASYPKESVPIVSITSK 414

Query: 417 LDGKSIIGHPIQIETLKDGSSDNLFSAIDDYSNDGFGFEGSAVLPPAWRTARRTANVRVP 476
           LDG SIIG PIQIE LKDGS+DNLFSAIDD+SND  G+EGS+VLPPAWRTARRTAN RVP
Sbjct: 415 LDGSSIIGRPIQIEVLKDGSTDNLFSAIDDFSNDMIGYEGSSVLPPAWRTARRTANFRVP 474

Query: 477 RPHILGAETVADFSLDQERNTEYKKLNGGSFSHNKASLPRKSGHNSVGPSINNKSFKKTP 536
           RPHI  +    DFSLDQERN  YK+LNGG+ SHN AS  +K+G NS GPS++ KSFKK+ 
Sbjct: 475 RPHISSSNVDEDFSLDQERNNGYKRLNGGNSSHN-ASHWKKNGLNSAGPSVDKKSFKKSA 533

Query: 537 KKVSLSSSQKTRTLSSLSAEHH-SKKPSLGRSFHQTERLTKPEVSGLTTVACIPVKLVFS 595
           KKVSLSSSQKTRTLSSLS E +  +KPSL RSF++T++ TKPEVSGLTTVACIPVKLVFS
Sbjct: 534 KKVSLSSSQKTRTLSSLSIEDNLGRKPSLTRSFYRTDKTTKPEVSGLTTVACIPVKLVFS 593

Query: 596 RLLEKI 601
           RLLEKI
Sbjct: 594 RLLEKI 599


>Medtr4g077550.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr4:29681931-29685319 | 20130731
          Length = 736

 Score =  414 bits (1063), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 251/511 (49%), Positives = 305/511 (59%), Gaps = 31/511 (6%)

Query: 125 SGVVQMGPVFRAKRSRCMYLPAESSDSLDYKE--TLTNFPGSSSQPAGENPYXXXXXXXX 182
           +G  QM   +R KRS   Y PA+S+D LDYKE   L   P   S   G+ PY        
Sbjct: 245 NGARQM--TYRTKRSCPFYFPAKSNDLLDYKERPALLEMP---SPNGGKFPYHGSLVGET 299

Query: 183 XXXFMXXXXXXXXXX---XXXXXXXXXXXXXLDRDEETIILSETVGXXXXXXXXXXXXXX 239
              FM                           D D +  IL+ET                
Sbjct: 300 ESTFMDDAESGSSETDFTESTVSDSDSSETEPDMDVKMAILAETGREFEEHENTSSEEPD 359

Query: 240 XLAISGDMPHLYRREPITCNEAVSKWQLKGKRNNRNLVKRSGVVSNRKDGVLHGADVEGQ 299
            LA++ DMPHLY RE ITC+EAVSKWQLKGKRNNRNL+KRS    + K G+++GA+ + +
Sbjct: 360 DLAVTSDMPHLYPRELITCHEAVSKWQLKGKRNNRNLIKRSYGAPDGK-GIIYGAEGDFE 418

Query: 300 RNHLNMRSGSSLHYYRNDYSDVLDEHDQMFGLEDEYSPTPRAVAK---KTHHDVDWDECA 356
               N+ S  SLH Y N +SD L E DQM  LEDE S TPR V+K   K H   DW++  
Sbjct: 419 EGRTNL-SHKSLHCYENGFSDALYEDDQMLELEDEDSLTPRPVSKFQNKIHRGTDWNDLT 477

Query: 357 WEDEPASRGYWDIKGFAPLYSDSYNSHGRNGPMLVDVDLKVQANASYRKNSVSFISITSE 416
           W++  AS+ YWD+K + P Y D Y+   R   ML++VD++VQA   YRK  V  IS+ S+
Sbjct: 478 WDENVASKEYWDMKEYNPTYGDRYHVGRRMRSMLINVDVRVQAG--YRKEPVPIISLMSK 535

Query: 417 LDGKSIIGHPIQIETLKDGSSDNLFSAIDDYSNDGFGFEGSAVLPPAWRTARRTANVRVP 476
           LDGK+IIGHPIQ+E LKDGSSD  FSAIDD+SN+G G EGS VLP AWRTARRTAN RVP
Sbjct: 536 LDGKAIIGHPIQVEVLKDGSSDTFFSAIDDFSNEGIGIEGS-VLPQAWRTARRTANFRVP 594

Query: 477 RPHIL---GAETVADF-SLDQERNTEYKKLNGGSFSHNKASLPRKSGHNSVGPSINNKSF 532
           RPH+    GAE   DF SLDQE+N +Y+KLN GS SHN ASL +KSG        + K F
Sbjct: 595 RPHVFLSTGAEAPVDFPSLDQEQNFDYEKLNTGSSSHN-ASLQKKSG--------DKKFF 645

Query: 533 KKTPKKVSLSSSQKTRTLSSLSAEHHSKKPSLGRSFHQTERLTKPEVSGLTTVACIPVKL 592
           +  PKK+SLSS+QK RTLSS SAEH  + P    S +QT+RL KPE+SG TTVACIPV+L
Sbjct: 646 ENVPKKLSLSSNQKIRTLSSSSAEHSVRNPLHDISSYQTDRLIKPEISGPTTVACIPVQL 705

Query: 593 VFSRLLEKIXXXXXXXXXXXXXXXTAMERNS 623
           V  RLLEKI               T +ERNS
Sbjct: 706 VHRRLLEKISRPPLKAASNAALLSTGVERNS 736



 Score =  167 bits (423), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 80/104 (76%), Positives = 84/104 (80%), Gaps = 1/104 (0%)

Query: 9   VDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXP-RSGTPVKLLGREDASVDWYNLE 67
           +DC VGSIVWVRRRNGSWWPGQI             P RSGTPVKLLGREDASVDWYNLE
Sbjct: 1   MDCGVGSIVWVRRRNGSWWPGQIIGPDDHSTSHLTSPPRSGTPVKLLGREDASVDWYNLE 60

Query: 68  KSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
           KSKRVK FRCGEFD  IE+ E++H MPLKKREKYARREDAILHA
Sbjct: 61  KSKRVKAFRCGEFDDYIEKIEASHEMPLKKREKYARREDAILHA 104


>Medtr8g015580.1 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106477-5100906 | 20130731
          Length = 782

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 75/104 (72%)

Query: 8   AVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDASVDWYNLE 67
            ++  VG +VWVRRRNGSWWPG+I             PRSGTPVKLLGR+DASVDWYNLE
Sbjct: 17  GINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRDDASVDWYNLE 76

Query: 68  KSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
           KSKRVK FRC E+   IE+A+++     KK  KYARREDAILHA
Sbjct: 77  KSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHA 120



 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 44/206 (21%)

Query: 263 SKWQLKGKRNNRNLVKRSGVVSNR-----------------KDGVLHGADVEGQRNHLNM 305
           SKWQ KGKRN R+  K    VS +                  DG+  GA   GQ+  ++ 
Sbjct: 490 SKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGA---GQKQKIDW 546

Query: 306 RSGSSLHYYRNDYSDVLD----EHDQMFGLEDEYSPTPRAVAKKTHHDVDWDECAWEDEP 361
            +G+ +    N+ +  ++       Q+ G  D         A+     + + +  +    
Sbjct: 547 -NGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGTTAEPPQRSLPYRQSRF---- 601

Query: 362 ASRGYWDIKGFAPLYSDSYNSHGRNGP---MLVDVDLKVQANASYRKNSVSFISITSELD 418
           A    ++   F           GRN      L DV L+V++  SYR   V  +S+ S+L 
Sbjct: 602 AINSRYETADFP----------GRNCSSDGTLYDVKLEVKS--SYRPQHVPLVSLASKLS 649

Query: 419 GKSIIGHPIQIETLKDGSSDNLFSAI 444
           GK+ IGHP+ +E L+DG  D + S +
Sbjct: 650 GKAFIGHPLTVEVLEDGHCDKMLSGL 675


>Medtr8g015580.2 | tudor/PWWP/MBT superfamily protein | HC |
           chr8:5106185-5100906 | 20130731
          Length = 782

 Score =  138 bits (347), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 65/104 (62%), Positives = 75/104 (72%)

Query: 8   AVDCVVGSIVWVRRRNGSWWPGQIXXXXXXXXXXXXXPRSGTPVKLLGREDASVDWYNLE 67
            ++  VG +VWVRRRNGSWWPG+I             PRSGTPVKLLGR+DASVDWYNLE
Sbjct: 17  GINASVGGLVWVRRRNGSWWPGRIMSLDELSDGCLVSPRSGTPVKLLGRDDASVDWYNLE 76

Query: 68  KSKRVKPFRCGEFDACIERAESAHGMPLKKREKYARREDAILHA 111
           KSKRVK FRC E+   IE+A+++     KK  KYARREDAILHA
Sbjct: 77  KSKRVKAFRCREYAEAIEKAKASAAGLGKKAVKYARREDAILHA 120



 Score = 53.5 bits (127), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 44/206 (21%)

Query: 263 SKWQLKGKRNNRNLVKRSGVVSNR-----------------KDGVLHGADVEGQRNHLNM 305
           SKWQ KGKRN R+  K    VS +                  DG+  GA   GQ+  ++ 
Sbjct: 490 SKWQSKGKRNLRHKSKNGKQVSRKYIGMDGESDAYLTGTRNSDGLCEGA---GQKQKIDW 546

Query: 306 RSGSSLHYYRNDYSDVLD----EHDQMFGLEDEYSPTPRAVAKKTHHDVDWDECAWEDEP 361
            +G+ +    N+ +  ++       Q+ G  D         A+     + + +  +    
Sbjct: 547 -NGTGVSNASNNCTSQINCKTVAEGQVEGFRDLSKHIEGTTAEPPQRSLPYRQSRF---- 601

Query: 362 ASRGYWDIKGFAPLYSDSYNSHGRNGP---MLVDVDLKVQANASYRKNSVSFISITSELD 418
           A    ++   F           GRN      L DV L+V++  SYR   V  +S+ S+L 
Sbjct: 602 AINSRYETADFP----------GRNCSSDGTLYDVKLEVKS--SYRPQHVPLVSLASKLS 649

Query: 419 GKSIIGHPIQIETLKDGSSDNLFSAI 444
           GK+ IGHP+ +E L+DG  D + S +
Sbjct: 650 GKAFIGHPLTVEVLEDGHCDKMLSGL 675