Miyakogusa Predicted Gene

Lj2g3v2124620.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124620.1 Non Characterized Hit- tr|E1Z740|E1Z740_CHLVA
Putative uncharacterized protein OS=Chlorella
variabil,42.4,5e-18,UMP1,Proteasome maturation factor UMP1; PROTEASOME
MATURATION PROTEIN (UMP1),NULL; PROTEASOME MATURA,CUFF.38607.1
         (142 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g077240.1 | proteasome maturation factor UMP1 family prote...   226   4e-60
Medtr5g008020.1 | proteasome maturation factor UMP1 family prote...   206   8e-54
Medtr5g008020.2 | proteasome maturation factor UMP1 family prote...   167   2e-42

>Medtr4g077240.1 | proteasome maturation factor UMP1 family protein
           | HC | chr4:29591414-29595778 | 20130731
          Length = 142

 Score =  226 bits (577), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 107/142 (75%), Positives = 119/142 (83%)

Query: 1   MEEAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLY 60
           MEE +K+I HQIGG+  D LRFGL GVKSDIVG+HPL+S+ +S   + E MKRQC VNLY
Sbjct: 1   MEEESKTIPHQIGGVHTDVLRFGLPGVKSDIVGAHPLESSLQSVRGVEEAMKRQCKVNLY 60

Query: 61  GAAFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPL 120
           GAAFPLK +LDRQILSRFQRP G IPSSMLGLE  TG+LD FGFEDYL+D RESET RPL
Sbjct: 61  GAAFPLKEELDRQILSRFQRPPGVIPSSMLGLETVTGTLDHFGFEDYLNDSRESETFRPL 120

Query: 121 DMHHGMEVRLGLSKGPVCPSFM 142
           DMHHGMEVRLGLSKGPV PS +
Sbjct: 121 DMHHGMEVRLGLSKGPVYPSII 142


>Medtr5g008020.1 | proteasome maturation factor UMP1 family protein
           | HC | chr5:1637522-1634892 | 20130731
          Length = 123

 Score =  206 bits (523), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 102/142 (71%), Positives = 114/142 (80%), Gaps = 19/142 (13%)

Query: 1   MEEAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLY 60
           MEE AKSI HQIGGIQNDALRFGL GVKS+IV SHPLQS+Q+SAS+++E+MK+QCMVNLY
Sbjct: 1   MEEVAKSITHQIGGIQNDALRFGLHGVKSEIVDSHPLQSSQKSASRVDEMMKKQCMVNLY 60

Query: 61  GAAFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFTGSLDDFGFEDYLSDPRESETIRPL 120
           G +FPLKMDL  QILSRFQRP GAIPSSML                   D RESETIRPL
Sbjct: 61  GTSFPLKMDLHTQILSRFQRPPGAIPSSML-------------------DSRESETIRPL 101

Query: 121 DMHHGMEVRLGLSKGPVCPSFM 142
           DMH+GMEVR+GLSKGPVCPSF+
Sbjct: 102 DMHNGMEVRIGLSKGPVCPSFI 123


>Medtr5g008020.2 | proteasome maturation factor UMP1 family
          protein | HC | chr5:1637522-1635130 | 20130731
          Length = 96

 Score =  167 bits (424), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 79/96 (82%), Positives = 88/96 (91%)

Query: 1  MEEAAKSIAHQIGGIQNDALRFGLQGVKSDIVGSHPLQSAQESASKINEVMKRQCMVNLY 60
          MEE AKSI HQIGGIQNDALRFGL GVKS+IV SHPLQS+Q+SAS+++E+MK+QCMVNLY
Sbjct: 1  MEEVAKSITHQIGGIQNDALRFGLHGVKSEIVDSHPLQSSQKSASRVDEMMKKQCMVNLY 60

Query: 61 GAAFPLKMDLDRQILSRFQRPSGAIPSSMLGLEAFT 96
          G +FPLKMDL  QILSRFQRP GAIPSSMLGLEAFT
Sbjct: 61 GTSFPLKMDLHTQILSRFQRPPGAIPSSMLGLEAFT 96