Miyakogusa Predicted Gene

Lj2g3v2124190.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2124190.1 Non Characterized Hit- tr|C6SX87|C6SX87_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54882
PE,94,4e-19,Cytochrome c,Cytochrome c domain; CYTCHRMECIAB,Cytochrome
c, class IA/ IB; SUBFAMILY NOT NAMED,NULL;,CUFF.38579.1
         (50 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g008460.1 | cytochrome protein C | HC | chr5:1791124-17935...   105   8e-24
Medtr7g080803.1 | cytochrome protein C | HC | chr7:30770907-3077...    97   2e-21
Medtr7g080793.1 | cytochrome protein C | HC | chr7:30767589-3076...    75   1e-14

>Medtr5g008460.1 | cytochrome protein C | HC | chr5:1791124-1793503
           | 20130731
          Length = 113

 Score =  105 bits (263), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 50/50 (100%), Positives = 50/50 (100%)

Query: 1   MAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATAQ 50
           MAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATAQ
Sbjct: 64  MAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATAQ 113


>Medtr7g080803.1 | cytochrome protein C | HC |
           chr7:30770907-30773490 | 20130731
          Length = 114

 Score = 97.4 bits (241), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 45/49 (91%), Positives = 49/49 (100%)

Query: 2   AVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKEATAQ 50
           AV+WEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLK+AT++
Sbjct: 65  AVDWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLKDATSK 113


>Medtr7g080793.1 | cytochrome protein C | HC |
           chr7:30767589-30769319 | 20130731
          Length = 107

 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 35/45 (77%), Positives = 38/45 (84%)

Query: 1   MAVNWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQERADLIAYLK 45
           M++NWEEK + DYLLNP KYI  TKMVFP LKKPQER DLIAYLK
Sbjct: 63  MSMNWEEKIMDDYLLNPNKYILDTKMVFPALKKPQERVDLIAYLK 107