Miyakogusa Predicted Gene
- Lj2g3v2103100.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2103100.2 Non Characterized Hit- tr|I1LG46|I1LG46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.19073 PE,49.56,5e-18,no
description,NULL; seg,NULL,CUFF.38584.2
(232 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g018880.1 | nuclear transport factor 2 (NTF2) family prote... 290 6e-79
Medtr5g010050.1 | SnoaL-like domain protein | HC | chr5:2613254-... 106 2e-23
Medtr3g090440.1 | SnoaL-like domain protein | HC | chr3:41079404... 92 4e-19
Medtr2g025760.1 | transmembrane protein, putative | HC | chr2:92... 58 7e-09
Medtr2g025760.3 | transmembrane protein, putative | HC | chr2:92... 57 1e-08
Medtr2g025760.2 | transmembrane protein, putative | HC | chr2:92... 56 2e-08
>Medtr7g018880.1 | nuclear transport factor 2 (NTF2) family protein
| HC | chr7:6258169-6261112 | 20130731
Length = 223
Score = 290 bits (743), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 136/170 (80%), Positives = 154/170 (90%), Gaps = 3/170 (1%)
Query: 63 GEERSVTVASPDSASFGDDKVVDSAESVVRNFYGGVNVHDVDSVEHLIAEDCVYEDLVFS 122
GE S+T + F D+KVVDSA VVRNFY G+N HDVDSV++LI+E+CVYEDLVF
Sbjct: 57 GENNSITTTT---THFDDNKVVDSASKVVRNFYEGINAHDVDSVQYLISENCVYEDLVFP 113
Query: 123 QPFVGRKEIIEFFRKFTKSTSTDLQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSF 182
+PFVGRKEIIEFF+KFT+STS DLQFVIDDLST+D+SSVGVIWHLEWKGKPFPFSKGCSF
Sbjct: 114 RPFVGRKEIIEFFKKFTESTSLDLQFVIDDLSTEDTSSVGVIWHLEWKGKPFPFSKGCSF 173
Query: 183 YRLEVIDGKRQITYGRDCVEPAIKPGDATLAVIRSVTWILQQFPQLADRL 232
YRLEVI+GKRQITYGRDCVEPAIKPGDATLA+I+SVTW+LQ+FPQLADRL
Sbjct: 174 YRLEVINGKRQITYGRDCVEPAIKPGDATLAIIKSVTWLLQRFPQLADRL 223
>Medtr5g010050.1 | SnoaL-like domain protein | HC |
chr5:2613254-2611991 | 20130731
Length = 264
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%)
Query: 86 SAESVVRNFYGGVNVHDVDSVEHLIAEDCVYEDLVFSQPFVGRKEIIEFFRKFTKSTSTD 145
S +V +FY +N ++ ++ I++D + D F PF G+KE++ F ++ T +
Sbjct: 82 SPAEIVDHFYTCINEKELKQLDEYISQDACFYDYTFINPFQGKKEVMHFLQQLTAGMGQN 141
Query: 146 LQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVIDGKRQITYGRDCVEPAI 205
++F++ ++ D +V WHLEWK + PF+ GCSF++LE ++ I +E +
Sbjct: 142 VKFIVKNICEGDDLTVAAKWHLEWKKEQIPFTTGCSFFQLEKVEENMTIRRAEIFIESLV 201
Query: 206 KPGDATLAVIRSVTWILQQFPQLAD 230
KPG L V++++T + FP A+
Sbjct: 202 KPGSIVLTVLKTMTSLFDDFPNAAE 226
>Medtr3g090440.1 | SnoaL-like domain protein | HC |
chr3:41079404-41081631 | 20130731
Length = 255
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 76/140 (54%)
Query: 90 VVRNFYGGVNVHDVDSVEHLIAEDCVYEDLVFSQPFVGRKEIIEFFRKFTKSTSTDLQFV 149
+V FY N D ++++ L++ +CVY+DL+F + G++ II+F++ + ++
Sbjct: 89 IVHEFYEAFNKKDTETLKQLLSPNCVYQDLLFYTAYEGQESIIKFWQSVMDAMGPNIHVF 148
Query: 150 IDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVIDGKRQITYGRDCVEPAIKPGD 209
++D+ + V HL WK K PF+ GC F+ E ++GK I+ E +KPG+
Sbjct: 149 VEDVKESNHVMVTAFMHLVWKEKKLPFTNGCRFFTFEEVEGKFLISKITCMEEFPLKPGE 208
Query: 210 ATLAVIRSVTWILQQFPQLA 229
L +++ + IL +P A
Sbjct: 209 LVLKLLKGIGQILDSYPLAA 228
>Medtr2g025760.1 | transmembrane protein, putative | HC |
chr2:9223397-9221517 | 20130731
Length = 251
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 5/137 (3%)
Query: 71 ASPDSASFGDDKVVDSAESVVRNFYGGVNVHDVDSVEHLIAEDC--VYEDLVFSQPFVGR 128
+ +S G+D D A V Y ++ + ++A++C V L F Q F G+
Sbjct: 64 SKKNSEPVGEDN--DQALDAVMKLYSAFKNKNIQELSEILADECRCVCNFLSFFQAFQGK 121
Query: 129 KEIIEFFRKFTKSTSTDLQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVI 188
+++EFF + ++Q V+ + D +VGV W EW P KG SF+ +
Sbjct: 122 TQVLEFFSHLIRLFGDNIQIVVKP-TLHDGMNVGVHWKFEWNTIHIPLGKGFSFHICQTY 180
Query: 189 DGKRQITYGRDCVEPAI 205
GK I +EP +
Sbjct: 181 RGKAVIKNIDMFMEPLL 197
>Medtr2g025760.3 | transmembrane protein, putative | HC |
chr2:9223437-9221355 | 20130731
Length = 209
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 5/128 (3%)
Query: 71 ASPDSASFGDDKVVDSAESVVRNFYGGVNVHDVDSVEHLIAEDC--VYEDLVFSQPFVGR 128
+ +S G+D D A V Y ++ + ++A++C V L F Q F G+
Sbjct: 80 SKKNSEPVGEDN--DQALDAVMKLYSAFKNKNIQELSEILADECRCVCNFLSFFQAFQGK 137
Query: 129 KEIIEFFRKFTKSTSTDLQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVI 188
+++EFF + ++Q V+ + D +VGV W EW P KG SF+ +
Sbjct: 138 TQVLEFFSHLIRLFGDNIQIVVKP-TLHDGMNVGVHWKFEWNTIHIPLGKGFSFHICQTY 196
Query: 189 DGKRQITY 196
GK I +
Sbjct: 197 RGKAVIKF 204
>Medtr2g025760.2 | transmembrane protein, putative | HC |
chr2:9223437-9221355 | 20130731
Length = 202
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Query: 74 DSASFGDDKVVDSAESVVRNFYGGVNVHDVDSVEHLIAEDC--VYEDLVFSQPFVGRKEI 131
+S G+D D A V Y ++ + ++A++C V L F Q F G+ ++
Sbjct: 83 NSEPVGEDN--DQALDAVMKLYSAFKNKNIQELSEILADECRCVCNFLSFFQAFQGKTQV 140
Query: 132 IEFFRKFTKSTSTDLQFVIDDLSTKDSSSVGVIWHLEWKGKPFPFSKGCSFYRLEVIDGK 191
+EFF + ++Q V+ + D +VGV W EW P KG SF+ + GK
Sbjct: 141 LEFFSHLIRLFGDNIQIVVKP-TLHDGMNVGVHWKFEWNTIHIPLGKGFSFHICQTYRGK 199
Query: 192 RQ 193
+
Sbjct: 200 AE 201