Miyakogusa Predicted Gene

Lj2g3v2102990.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2102990.1 tr|G7K978|G7K978_MEDTR Ethylene-responsive
transcription factor ERF019 OS=Medicago truncatula
GN=MTR,45.74,5e-18,seg,NULL,CUFF.38694.1
         (161 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g008790.1 | AP2 domain class transcription factor | HC | c...    79   2e-15

>Medtr5g008790.1 | AP2 domain class transcription factor | HC |
           chr5:1925879-1926821 | 20130731
          Length = 162

 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 37/53 (69%), Positives = 44/53 (83%), Gaps = 1/53 (1%)

Query: 38  RRPSTAEKLNFPEALSSYCAHQRDD-MSPRSVQRVASDFAMDVDARKVAAGET 89
           +RPST +KLNFP+ LSSYC  QRD+ MSPRSVQ+VASD AMDVDAR +A+  T
Sbjct: 65  KRPSTLDKLNFPDILSSYCIQQRDNLMSPRSVQKVASDVAMDVDARNIASQAT 117