Miyakogusa Predicted Gene
- Lj2g3v2089800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2089800.1 tr|G7K989|G7K989_MEDTR Zinc finger CCCH
domain-containing protein OS=Medicago truncatula
GN=MTR_5g00,66.57,0,RRM,RNA recognition motif domain; ZF_C3H1,Zinc
finger, CCCH-type; no description,Nucleotide-binding,,CUFF.38563.1
(657 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g008900.1 | zinc finger CCCH domain protein | HC | chr5:19... 771 0.0
Medtr3g436060.1 | RNA-binding domain CCCH-type zinc finger prote... 380 e-105
Medtr0005s0130.1 | RNA-binding domain CCCH-type zinc finger prot... 356 4e-98
Medtr4g043660.1 | RNA-binding domain CCCH-type zinc finger prote... 356 4e-98
Medtr4g043660.2 | RNA-binding domain CCCH-type zinc finger prote... 356 4e-98
Medtr5g094700.1 | RNA-binding domain CCCH-type zinc finger prote... 180 5e-45
Medtr3g056160.1 | RNA-binding domain CCCH-type zinc finger prote... 176 1e-43
Medtr3g056160.2 | RNA-binding domain CCCH-type zinc finger prote... 176 1e-43
>Medtr5g008900.1 | zinc finger CCCH domain protein | HC |
chr5:1988974-1993972 | 20130731
Length = 685
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/691 (63%), Positives = 490/691 (70%), Gaps = 52/691 (7%)
Query: 1 MGSFEATNVVLSRIKNIEPENASKIMGYLLMNLEDSELLRLACSPDPVLHTIIPRVKTHL 60
MGS+EATNVVL+++KN +PENASKIMG+LLMNLE+ EL+RLAC PD VLH + RVKTHL
Sbjct: 1 MGSYEATNVVLAKVKNFDPENASKIMGFLLMNLEEYELVRLACCPDHVLHNLAIRVKTHL 60
Query: 61 GLTL-TPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTNGFDFSRNPFSLSG------- 112
G+ L TPSSPS PI ++ NPFSK SPR +NGFDF+RNP S SG
Sbjct: 61 GMNLSTPSSPS-PLNPIGRITSSSNNPFSKSSPR---GSNGFDFNRNPSSPSGNVWSQPS 116
Query: 113 LPKNHPISPTSSSLLSYENIRAAS---------------SFQPRVNNGDVDLVDEQQVNE 157
PKN PISP + L+SYENI+ +F PRVNNGD D VDEQQ+NE
Sbjct: 117 FPKN-PISPKFNPLMSYENIQGGVGVVGGGGGSGAGGSCAFSPRVNNGDYDFVDEQQLNE 175
Query: 158 FFPFLNEPSNNDDAFDPHLEPGIGGPNWHSVNNGDAH-FHRRSFSASDAXXXXXXXXXXX 216
FPFLNE SN DD DP LE G+GG NW S NNGDAH H+RSFSA+DA
Sbjct: 176 CFPFLNESSNGDDLVDPRLEMGVGGQNWISGNNGDAHNIHKRSFSANDASFSVEESGLGF 235
Query: 217 XXXXXXKPCLYFARGFCKNGSNCKFVHVALPDTPDASAIVGSPG--ELMRREELLRFKVA 274
KPCLYFARGFCKNGSNCKFVH D ++ A+VGSP L + EE +RFK A
Sbjct: 236 GF----KPCLYFARGFCKNGSNCKFVHGDSIDA-NSGAVVGSPKFEGLEQHEEFMRFKAA 290
Query: 275 Q-HQRLLAASQLVAG-TSPSSHDKYIDFLMQQQNDPQRVAAAASAFNMGEKFCNFS-RGR 331
Q HQR++AASQL AG TSP S+DKYID LMQQ +D QR AAA+ MGE++ N + RGR
Sbjct: 291 QQHQRMVAASQLAAGGTSPVSYDKYIDLLMQQHSDNQRAVAAAAF-AMGEEYFNITGRGR 349
Query: 332 MERNDFLAMFSGEKTNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF 391
ERN+FLAM SG+K NSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF
Sbjct: 350 PERNEFLAMVSGDKPNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMF 409
Query: 392 GFVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRXXXXXXXLERGDFFP-L 450
GFVTFV+PETVR+ILSKGNPHFICDSRVLVKPYKEKGKVPDKR ERGDF P L
Sbjct: 410 GFVTFVFPETVRVILSKGNPHFICDSRVLVKPYKEKGKVPDKRHQHQQQQFERGDFSPCL 469
Query: 451 SPSAFDSKEPYDFHLGQRVLYNPHDILLRRKYXXXXXX-XXXXXXXXRRMKSLQLSDLKN 509
SPSAFDSKEP+DFH G R+LYNPHDILLRRK RR+KSLQL D KN
Sbjct: 470 SPSAFDSKEPFDFHPGTRMLYNPHDILLRRKIEEQAADFQQVLELQERRLKSLQLPDFKN 529
Query: 510 NPI-HHQRSFSVGAPFAFPHPLSSHVISAGLSSD--IGDITGYSGGLTSTNSLETASEQQ 566
NPI HHQRS SVGAP FPH L SHV AGLS D GD TGYSG LTS SL ASEQQ
Sbjct: 530 NPIHHHQRSLSVGAPLVFPHQLHSHVNHAGLSPDNIQGDFTGYSGSLTSAGSLGAASEQQ 589
Query: 567 QPQKEVDPACIDDT----EGENIKDSLNAEVTDLSK-SVEQDLPDSLFASPTKAAGDYMS 621
+ KE DP+CID E N+KD +E DL K +VE LPDSLFASPTKAAGDY+S
Sbjct: 590 ELHKEADPSCIDAVTAAAESGNLKDVAKSEGVDLGKRNVEHTLPDSLFASPTKAAGDYLS 649
Query: 622 DFSTLTEVKESAEFSTSSSTRNNLESTTASS 652
DFS E ES FST+ S + ESTT++S
Sbjct: 650 DFSPQEEANESTAFSTTLSQK--FESTTSAS 678
>Medtr3g436060.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr3:12079943-12084739 | 20130731
Length = 701
Score = 380 bits (977), Expect = e-105, Method: Compositional matrix adjust.
Identities = 282/698 (40%), Positives = 382/698 (54%), Gaps = 69/698 (9%)
Query: 1 MGSFEATNVVLSRIKNIEPENASKIMGYLLM-NLEDSELLRLACSPDPVLHTIIPRVKTH 59
M +EAT +V SRI+N++PENASKIMG LL+ + + E++RLA P+ +LH++I + +
Sbjct: 1 MDGYEATKIVFSRIQNMDPENASKIMGLLLLQDHGEKEMIRLAFVPESLLHSVIFKARNE 60
Query: 60 LGLTLTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTNGFDFSRNPFSLSGLPKNHPI 119
LG++L S + P ++N P + + S R+ +G P +LS N
Sbjct: 61 LGISLNSPSTPQSPSPFHSSNPVPISRQNSNSSRLIN--SGMTL---PSNLSIPNPNSAS 115
Query: 120 SPTSSSLLSYENIRAASSFQPRVNNGDV--DLVDEQQVNEFFPFLNEPSNND-------- 169
T S L ++++ + ++ P NG V D +DE + + FLN+ N+D
Sbjct: 116 WATLSELQNHDDSPSMNNSSPFYGNGGVGNDSIDEFHLQDQLSFLNDGKNSDLFYSQSEL 175
Query: 170 -----------DAFDPHLEPGIGGPNWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXX 218
+ DP P G G HRRS S +DA
Sbjct: 176 SSSPSNGGSVGNGVDPSFFPSYG--------YGGGSVHRRSCSVNDAACLVSEDPNSGLG 227
Query: 219 XXXXKPCLYFARGFCKNGSNCKFVHVALPDTPD-ASAIVGSPG--ELMRR--EELLRFKV 273
KPCLY+ARG+CKNG++C+F+H D + ++ GSP E+M + E+LLR K
Sbjct: 228 W---KPCLYYARGYCKNGTSCRFLHGGFGDGGEGVPSMDGSPNKIEMMDQCHEQLLRSKS 284
Query: 274 AQHQRLLAASQLVAGTSPSSHD-KYIDFLMQQQNDPQRVAAAASAFNMGEKFCNFSRGRM 332
Q QRL AASQL+A TSP + K + L+QQQ AAA+A M E F R R+
Sbjct: 285 LQQQRLAAASQLMA-TSPFPYSPKSMSLLLQQQQLSDSQRAAAAALIMNEDLQKFGRSRL 343
Query: 333 ERNDFLAMFSGEKTNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFG 392
ERNDF ++ + N ASRQIYLTFPA+STFK+EDVS YFS +G VQDVRIPYQQKRMFG
Sbjct: 344 ERNDF-SLNNIGMMNPASRQIYLTFPADSTFKEEDVSNYFSIYGLVQDVRIPYQQKRMFG 402
Query: 393 FVTFVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKRXXXXXXXLERGDFFPL-S 451
FVTFVYPETV+LIL+KGNPHF+CD+RVLVKPYKEKGKVPDK +ERGDF P +
Sbjct: 403 FVTFVYPETVKLILAKGNPHFVCDARVLVKPYKEKGKVPDK--YRKHQQMERGDFSPCGT 460
Query: 452 PSAFDSKEPYDFHLGQRVLYNPHDILLRRKYXXXXXXXXXXXXXXRRMKSLQLSDLKNNP 511
P+ D ++P+D LG R+ YN DIL RR+ RR+ SLQL D+K
Sbjct: 461 PTGLDGRDPFD--LGGRMYYNTQDILWRRRLEEQADLQQALEAQSRRLMSLQLLDIKK-- 516
Query: 512 IHHQRSFSVGAPFAFPHPLSS--------HVISAGLSSDIGDITGYSGGLTSTNSLETAS 563
HQR+ S G+P P P S S SS+ + G G S ++
Sbjct: 517 -QHQRALSSGSP--IPSPTHSPNMFNHNFPFSSFHSSSESQEENGSGSGSGSASTASIPV 573
Query: 564 EQQQPQKEVDPACIDDTEGENI----KDSLNAEVTDLSKSVEQDLPDSLFASPTKAAGDY 619
+QQ A ++ E N K S N E +DL + +E +LPDS FASPTKA GDY
Sbjct: 574 DQQVNISVGKEAAVNGGENGNSDASGKQSSNHEESDLQECLEHNLPDSPFASPTKAIGDY 633
Query: 620 MSDFSTL-TEVKESAEFSTSSSTRNNLESTTASSDVAS 656
M+ F+ E +S + S + N L +++S D+ S
Sbjct: 634 MAAFNNGPNETNDSDASANSKFSTNTLLPSSSSLDMGS 671
>Medtr0005s0130.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | scaffold0005:207720-204250 | 20130731
Length = 666
Score = 356 bits (914), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 275/686 (40%), Positives = 377/686 (54%), Gaps = 81/686 (11%)
Query: 1 MGSFEATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTH 59
M +EAT +V SRIK+++PENAS IMG LL + E++RLA SP+ ++H++I + +
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 60 LGLTLTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTN-GFDFSRNPFSLSGLPKNHP 118
LGL P S ++ P ST+ + N S+ + + + GF+ LP +
Sbjct: 61 LGL---PCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFN----------LPPSLT 107
Query: 119 ISPTSSSLLSYENIRAASSFQPRVNNGDVDLVDEQQVNEFFPFLNEPSNNDDAFDPHLEP 178
I P S + + + FQ N+ D D +D+ Q+ + FLN+ S +P
Sbjct: 108 I-PNPSWGATTTTMSMSDQFQ---NHDDSDPIDDFQLQDQLSFLNDGS----------DP 153
Query: 179 GIGGPNWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSN 238
G W G++ HRRS S +DA KPCLYFARG+CKNG++
Sbjct: 154 SYG---W----GGNSSLHRRSCSVNDAYLAGSEDPSAGLGW---KPCLYFARGYCKNGTS 203
Query: 239 CKFVHVALPDTPDASAIVGSPGEL-----MRREELLRFKVAQHQRLLAA---SQLVAGTS 290
C+F+H + A+AIVGSP ++ ELLR K + QR AA SQL+A S
Sbjct: 204 CRFLHG--DASAAAAAIVGSPNKIENMMDQYHHELLRSKSSHQQRFAAAAAASQLMASNS 261
Query: 291 PSSHDKYIDFLMQQQN---DPQRVAAAASAFNMGEKFCNFSRGRMERNDFLAMFSGEKTN 347
K ++FL+QQQ D QR AAA+A M E+ F R R+ERNDF N
Sbjct: 262 FLCSPKGMNFLLQQQQNQNDTQR--AAAAALMMNEELHKFGRSRLERNDFSLYSPTGMIN 319
Query: 348 SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILS 407
ASRQIYLTFPA+STF++EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFV+PETV+ ILS
Sbjct: 320 PASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILS 379
Query: 408 KGNPHFICDSRVLVKPYKEKGKVPDKRXXXXXXXLERGDFFPL-SPSAF-DSKEPYDFHL 465
KGNPHF+C++RVLVKPYKEKGK+PDK+ ++GDF P +P+ D+++ YD L
Sbjct: 380 KGNPHFVCEARVLVKPYKEKGKIPDKKQLQ-----QQGDFSPCRTPTGLVDARDQYDLQL 434
Query: 466 GQRVLYNPHDILLRRKYXXXXXXXXXXXXXXRRMKSLQLSDLKNNPIHHQRSFSVG---- 521
+R+ YN D+L RRK RR+ LQL D+KN HQR+ S G
Sbjct: 435 AERMFYNTEDMLWRRK-EQAELQQQALEIQRRRLMGLQLLDIKN---QHQRALSTGSLVH 490
Query: 522 APFAFPHPLSSH-VISAGLSSDIGDITGYSGGLTSTNSLETASEQQQPQKEVDPACIDDT 580
+P P+ + V+ SS+ D+ G + +N+ +A +Q ++
Sbjct: 491 SPTQSPNMFDQNLVLPFRRSSEFSDVIGSNSASAHSNASVSAGQQSVKGYAGKEVLVNGE 550
Query: 581 EG-----ENIK-DSLNAEVTDLSK--SVEQDLPDSLFASPTKAAGDYMSDFST--LTEVK 630
G EN K S + E +L + +E +LPDS FASPTKA GD + FS L +
Sbjct: 551 NGNSESNENGKTSSSHEEELNLHECLELEHNLPDSPFASPTKAVGDLVGPFSNGPLETID 610
Query: 631 ESAEFSTSSSTRNNLESTTASSDVAS 656
A S+ T + L T+AS D+ S
Sbjct: 611 SDASTSSKFGT-SKLLPTSASLDMGS 635
>Medtr4g043660.1 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr4:14609657-14612948 | 20130731
Length = 666
Score = 356 bits (914), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 275/686 (40%), Positives = 377/686 (54%), Gaps = 81/686 (11%)
Query: 1 MGSFEATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTH 59
M +EAT +V SRIK+++PENAS IMG LL + E++RLA SP+ ++H++I + +
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 60 LGLTLTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTN-GFDFSRNPFSLSGLPKNHP 118
LGL P S ++ P ST+ + N S+ + + + GF+ LP +
Sbjct: 61 LGL---PCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFN----------LPPSLT 107
Query: 119 ISPTSSSLLSYENIRAASSFQPRVNNGDVDLVDEQQVNEFFPFLNEPSNNDDAFDPHLEP 178
I P S + + + FQ N+ D D +D+ Q+ + FLN+ S +P
Sbjct: 108 I-PNPSWGATTTTMSMSDQFQ---NHDDSDPIDDFQLQDQLSFLNDGS----------DP 153
Query: 179 GIGGPNWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSN 238
G W G++ HRRS S +DA KPCLYFARG+CKNG++
Sbjct: 154 SYG---W----GGNSSLHRRSCSVNDAYLAGSEDPSAGLGW---KPCLYFARGYCKNGTS 203
Query: 239 CKFVHVALPDTPDASAIVGSPGEL-----MRREELLRFKVAQHQRLLAA---SQLVAGTS 290
C+F+H + A+AIVGSP ++ ELLR K + QR AA SQL+A S
Sbjct: 204 CRFLHG--DASAAAAAIVGSPNKIENMMDQYHHELLRSKSSHQQRFAAAAAASQLMASNS 261
Query: 291 PSSHDKYIDFLMQQQN---DPQRVAAAASAFNMGEKFCNFSRGRMERNDFLAMFSGEKTN 347
K ++FL+QQQ D QR AAA+A M E+ F R R+ERNDF N
Sbjct: 262 FLCSPKGMNFLLQQQQNQNDTQR--AAAAALMMNEELHKFGRSRLERNDFSLYSPTGMIN 319
Query: 348 SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILS 407
ASRQIYLTFPA+STF++EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFV+PETV+ ILS
Sbjct: 320 PASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILS 379
Query: 408 KGNPHFICDSRVLVKPYKEKGKVPDKRXXXXXXXLERGDFFPL-SPSAF-DSKEPYDFHL 465
KGNPHF+C++RVLVKPYKEKGK+PDK+ ++GDF P +P+ D+++ YD L
Sbjct: 380 KGNPHFVCEARVLVKPYKEKGKIPDKKQLQ-----QQGDFSPCRTPTGLVDARDQYDLQL 434
Query: 466 GQRVLYNPHDILLRRKYXXXXXXXXXXXXXXRRMKSLQLSDLKNNPIHHQRSFSVG---- 521
+R+ YN D+L RRK RR+ LQL D+KN HQR+ S G
Sbjct: 435 AERMFYNTEDMLWRRK-EQAELQQQALEIQRRRLMGLQLLDIKN---QHQRALSTGSLVH 490
Query: 522 APFAFPHPLSSH-VISAGLSSDIGDITGYSGGLTSTNSLETASEQQQPQKEVDPACIDDT 580
+P P+ + V+ SS+ D+ G + +N+ +A +Q ++
Sbjct: 491 SPTQSPNMFDQNLVLPFRRSSEFSDVIGSNSASAHSNASVSAGQQSVKGYAGKEVLVNGE 550
Query: 581 EG-----ENIK-DSLNAEVTDLSK--SVEQDLPDSLFASPTKAAGDYMSDFST--LTEVK 630
G EN K S + E +L + +E +LPDS FASPTKA GD + FS L +
Sbjct: 551 NGNSESNENGKTSSSHEEELNLHECLELEHNLPDSPFASPTKAVGDLVGPFSNGPLETID 610
Query: 631 ESAEFSTSSSTRNNLESTTASSDVAS 656
A S+ T + L T+AS D+ S
Sbjct: 611 SDASTSSKFGT-SKLLPTSASLDMGS 635
>Medtr4g043660.2 | RNA-binding domain CCCH-type zinc finger protein
| HC | chr4:14609657-14612948 | 20130731
Length = 666
Score = 356 bits (914), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 275/686 (40%), Positives = 377/686 (54%), Gaps = 81/686 (11%)
Query: 1 MGSFEATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTH 59
M +EAT +V SRIK+++PENAS IMG LL + E++RLA SP+ ++H++I + +
Sbjct: 1 MDGYEATKMVFSRIKSMDPENASNIMGLLLSKEHGEKEMIRLALSPESLIHSVIFKARKE 60
Query: 60 LGLTLTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTN-GFDFSRNPFSLSGLPKNHP 118
LGL P S ++ P ST+ + N S+ + + + GF+ LP +
Sbjct: 61 LGL---PCSNNSPPTPSSTSPSPSPNFLSRQNSSTSSRLSSGFN----------LPPSLT 107
Query: 119 ISPTSSSLLSYENIRAASSFQPRVNNGDVDLVDEQQVNEFFPFLNEPSNNDDAFDPHLEP 178
I P S + + + FQ N+ D D +D+ Q+ + FLN+ S +P
Sbjct: 108 I-PNPSWGATTTTMSMSDQFQ---NHDDSDPIDDFQLQDQLSFLNDGS----------DP 153
Query: 179 GIGGPNWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSN 238
G W G++ HRRS S +DA KPCLYFARG+CKNG++
Sbjct: 154 SYG---W----GGNSSLHRRSCSVNDAYLAGSEDPSAGLGW---KPCLYFARGYCKNGTS 203
Query: 239 CKFVHVALPDTPDASAIVGSPGEL-----MRREELLRFKVAQHQRLLAA---SQLVAGTS 290
C+F+H + A+AIVGSP ++ ELLR K + QR AA SQL+A S
Sbjct: 204 CRFLHG--DASAAAAAIVGSPNKIENMMDQYHHELLRSKSSHQQRFAAAAAASQLMASNS 261
Query: 291 PSSHDKYIDFLMQQQN---DPQRVAAAASAFNMGEKFCNFSRGRMERNDFLAMFSGEKTN 347
K ++FL+QQQ D QR AAA+A M E+ F R R+ERNDF N
Sbjct: 262 FLCSPKGMNFLLQQQQNQNDTQR--AAAAALMMNEELHKFGRSRLERNDFSLYSPTGMIN 319
Query: 348 SASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVYPETVRLILS 407
ASRQIYLTFPA+STF++EDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFV+PETV+ ILS
Sbjct: 320 PASRQIYLTFPADSTFREEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVFPETVKDILS 379
Query: 408 KGNPHFICDSRVLVKPYKEKGKVPDKRXXXXXXXLERGDFFPL-SPSAF-DSKEPYDFHL 465
KGNPHF+C++RVLVKPYKEKGK+PDK+ ++GDF P +P+ D+++ YD L
Sbjct: 380 KGNPHFVCEARVLVKPYKEKGKIPDKKQLQ-----QQGDFSPCRTPTGLVDARDQYDLQL 434
Query: 466 GQRVLYNPHDILLRRKYXXXXXXXXXXXXXXRRMKSLQLSDLKNNPIHHQRSFSVG---- 521
+R+ YN D+L RRK RR+ LQL D+KN HQR+ S G
Sbjct: 435 AERMFYNTEDMLWRRK-EQAELQQQALEIQRRRLMGLQLLDIKN---QHQRALSTGSLVH 490
Query: 522 APFAFPHPLSSH-VISAGLSSDIGDITGYSGGLTSTNSLETASEQQQPQKEVDPACIDDT 580
+P P+ + V+ SS+ D+ G + +N+ +A +Q ++
Sbjct: 491 SPTQSPNMFDQNLVLPFRRSSEFSDVIGSNSASAHSNASVSAGQQSVKGYAGKEVLVNGE 550
Query: 581 EG-----ENIK-DSLNAEVTDLSK--SVEQDLPDSLFASPTKAAGDYMSDFST--LTEVK 630
G EN K S + E +L + +E +LPDS FASPTKA GD + FS L +
Sbjct: 551 NGNSESNENGKTSSSHEEELNLHECLELEHNLPDSPFASPTKAVGDLVGPFSNGPLETID 610
Query: 631 ESAEFSTSSSTRNNLESTTASSDVAS 656
A S+ T + L T+AS D+ S
Sbjct: 611 SDASTSSKFGT-SKLLPTSASLDMGS 635
>Medtr5g094700.1 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr5:41381585-41375614 | 20130731
Length = 548
Score = 180 bits (456), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 207/459 (45%), Gaps = 75/459 (16%)
Query: 5 EATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTHLGLT 63
E T +V +I+ EPENA KI+GYLL+ + E+ RLA PD ++ ++ + L +
Sbjct: 5 EYTRIVFDKIQKFEPENARKIIGYLLLQDNGEQEMARLASCPDHIIGEVVFKALQMLAVN 64
Query: 64 LTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTNGFDFSRNPFSLSGLPKNHPISPTS 123
T PI N NP LS P P SP +
Sbjct: 65 ST-------MMPIPPPNVNPQQ-----------------------GLSHFPALSPSSPLN 94
Query: 124 SSL-LSYENIRAASSFQPRVNNGDV--DLVDEQQVNEFFPFLNEPSNNDDAFDPHLEPGI 180
+ SY + ++ S+ P + LV+ Q+ + N H+ G
Sbjct: 95 FQVPSSYWDPQSTSNANPEFTGMNYMDSLVELQKQTQLLSLENHLD--------HVNTGT 146
Query: 181 GGPNWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSNCK 240
G + NNG S + + K C YF++G+C++G NC+
Sbjct: 147 RGLVVNEYNNG-----LDSSAVNFGGKATKRFSNSSMSEFPLKICHYFSKGYCRHGGNCR 201
Query: 241 FVHVALP-----------DTPDASAIVGSPGELMRREELLRFKVAQHQRLLAASQLVAGT 289
+ H +P D V SPG L + E + ++ + +R S +A
Sbjct: 202 YFHGQVPHESFSHMHGNNDNTSNEDPVISPGSLAQIESEI-IELLKQRRGNPMS--IASL 258
Query: 290 SPSSHDKYIDFLMQQQNDPQRVAAAASAFNMGEKFCNFSRGRM--------------ERN 335
+ +DKY L + S +++ + + R+ +
Sbjct: 259 PMAYYDKYKKVLQAHGYLTESQRHGKSGYSLTKLLARLNSIRLIDRPHGQHAVVLAEDAP 318
Query: 336 DFLAMFSGEKTNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVT 395
++ + SASRQIYLTFPA+STF +EDV+EYF+ FG V+DVRIP QQKRMFGFVT
Sbjct: 319 KYIQKGDSVQNISASRQIYLTFPADSTFTEEDVAEYFNAFGYVEDVRIPCQQKRMFGFVT 378
Query: 396 FVYPETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKR 434
F PETVR+IL KGNPH++ SRVLVKPY+EK KV ++R
Sbjct: 379 FADPETVRMILDKGNPHYVRGSRVLVKPYREKTKVVERR 417
>Medtr3g056160.1 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr3:22346532-22343026 | 20130731
Length = 529
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 214/456 (46%), Gaps = 92/456 (20%)
Query: 5 EATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTHLGLT 63
E T +VL +I+ EPE+A+KI+GYLLM + E+ +LA PD ++ + + +T L
Sbjct: 5 ECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTELQKM 64
Query: 64 LTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTNGFDFSRNPFSLSGLPKNHPISPTS 123
T S IS+ N++P S ++ +P + F G ++ T
Sbjct: 65 ATRSV-------ISSGNSSP------ASFQVHSPYYNHGNTSPEFMTIGTTEHQ----TH 107
Query: 124 SSLLSYENIRAASSFQPRVNNGDVDLVDEQQVNEFFPFLNEPSNNDDAFDPHLEPGIGGP 183
++L EN S +N ++N D ++ +LE
Sbjct: 108 TALFGSENHHHVDS------------------------VNSTTDNYDCYNYYLEYA---- 139
Query: 184 NWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSNCKFVH 243
+V N + +R + ++ K C YF++G+C++G++C+F H
Sbjct: 140 --SAVANLNGKISKRFSNMTE---------------FPFKTCHYFSKGYCRHGNSCRFYH 182
Query: 244 VALPDTPDASAIVG-----------SPGELMRREELLRFKVAQHQRLLAASQLVAGTSPS 292
+ S + G SPG L + E + + Q ++ +A +
Sbjct: 183 HGQAVSDIVSHMYGNDAAANDEQAISPGSLAQLESEIVDLLKQRGNPIS----IASLPMA 238
Query: 293 SHDKYIDFLMQQQNDPQRVAAAASAFNMGEKFCNF-------SRGRMERNDFLA----MF 341
+DKY L + + S +N+ + R + LA F
Sbjct: 239 YYDKYKKVLQAEGYLAESQRHGKSGYNLTKLLIRLRNSIRLIDRPHGQHAVVLAEDAPKF 298
Query: 342 SGE---KTNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVY 398
G+ + SAS+QIYLTFPA+STF +EDVS YF FG V+DVRIP QQ+RMFGFVTFV
Sbjct: 299 MGKADCQNISASQQIYLTFPADSTFSEEDVSNYFGTFGSVEDVRIPCQQRRMFGFVTFVE 358
Query: 399 PETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKR 434
PETV++IL KGNPH++ SRVLVKPYKEK K+ D++
Sbjct: 359 PETVKMILDKGNPHYVRGSRVLVKPYKEKPKLIDRK 394
>Medtr3g056160.2 | RNA-binding domain CCCH-type zinc finger protein
| LC | chr3:22346532-22342932 | 20130731
Length = 529
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 139/456 (30%), Positives = 214/456 (46%), Gaps = 92/456 (20%)
Query: 5 EATNVVLSRIKNIEPENASKIMGYLLMNLE-DSELLRLACSPDPVLHTIIPRVKTHLGLT 63
E T +VL +I+ EPE+A+KI+GYLLM + E+ +LA PD ++ + + +T L
Sbjct: 5 ECTRIVLDKIQRFEPEHATKIIGYLLMQDNGEQEIAKLASFPDNLIREVALKARTELQKM 64
Query: 64 LTPSSPSTAARPISTTNNNPFNPFSKVSPRIPTPTNGFDFSRNPFSLSGLPKNHPISPTS 123
T S IS+ N++P S ++ +P + F G ++ T
Sbjct: 65 ATRSV-------ISSGNSSP------ASFQVHSPYYNHGNTSPEFMTIGTTEHQ----TH 107
Query: 124 SSLLSYENIRAASSFQPRVNNGDVDLVDEQQVNEFFPFLNEPSNNDDAFDPHLEPGIGGP 183
++L EN S +N ++N D ++ +LE
Sbjct: 108 TALFGSENHHHVDS------------------------VNSTTDNYDCYNYYLEYA---- 139
Query: 184 NWHSVNNGDAHFHRRSFSASDAXXXXXXXXXXXXXXXXXKPCLYFARGFCKNGSNCKFVH 243
+V N + +R + ++ K C YF++G+C++G++C+F H
Sbjct: 140 --SAVANLNGKISKRFSNMTE---------------FPFKTCHYFSKGYCRHGNSCRFYH 182
Query: 244 VALPDTPDASAIVG-----------SPGELMRREELLRFKVAQHQRLLAASQLVAGTSPS 292
+ S + G SPG L + E + + Q ++ +A +
Sbjct: 183 HGQAVSDIVSHMYGNDAAANDEQAISPGSLAQLESEIVDLLKQRGNPIS----IASLPMA 238
Query: 293 SHDKYIDFLMQQQNDPQRVAAAASAFNMGEKFCNF-------SRGRMERNDFLA----MF 341
+DKY L + + S +N+ + R + LA F
Sbjct: 239 YYDKYKKVLQAEGYLAESQRHGKSGYNLTKLLIRLRNSIRLIDRPHGQHAVVLAEDAPKF 298
Query: 342 SGE---KTNSASRQIYLTFPAESTFKDEDVSEYFSKFGPVQDVRIPYQQKRMFGFVTFVY 398
G+ + SAS+QIYLTFPA+STF +EDVS YF FG V+DVRIP QQ+RMFGFVTFV
Sbjct: 299 MGKADCQNISASQQIYLTFPADSTFSEEDVSNYFGTFGSVEDVRIPCQQRRMFGFVTFVE 358
Query: 399 PETVRLILSKGNPHFICDSRVLVKPYKEKGKVPDKR 434
PETV++IL KGNPH++ SRVLVKPYKEK K+ D++
Sbjct: 359 PETVKMILDKGNPHYVRGSRVLVKPYKEKPKLIDRK 394