Miyakogusa Predicted Gene

Lj2g3v2089750.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2089750.2 tr|B9HP09|B9HP09_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088048 PE=4
SV=1,85.69,0,BchD-ChlD: magnesium chelatase ATPase subunit D,Magnesium
chelatase, ATPase subunit D; von Willebran,CUFF.38559.2
         (473 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g009070.1 | protoporphyrin IX magnesium chelatase subunit ...   707   0.0  
Medtr5g009070.2 | protoporphyrin IX magnesium chelatase subunit ...   520   e-147

>Medtr5g009070.1 | protoporphyrin IX magnesium chelatase subunit
           ChlD | HC | chr5:2082719-2069192 | 20130731
          Length = 754

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/473 (77%), Positives = 385/473 (81%)

Query: 1   MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
           MSFE+RVAAVG+ATEFQ+N G+VFK ++E+TD AKTQIIL+REYLKDVTI  EQLKYLV+
Sbjct: 282 MSFENRVAAVGIATEFQDNCGEVFKTVDEDTDNAKTQIILAREYLKDVTIGKEQLKYLVL 341

Query: 61  EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITEKXXXXXX 120
           EALRGG QGHRAELYAARVAKCLAALEGREKV+ DDLKKAVELVILPRSI+T+       
Sbjct: 342 EALRGGVQGHRAELYAARVAKCLAALEGREKVYADDLKKAVELVILPRSIVTDNPPEQQN 401

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEEFIFDAEGGFVDE 180
                                                       LPEEFIFDAEGG VDE
Sbjct: 402 QPPPPPPPPQNQESNEEQNEEEDKEEEEEEEDDKDEEKEEQQEQLPEEFIFDAEGGLVDE 461

Query: 181 KLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 240
           KLLFFAQQAQR+RGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR
Sbjct: 462 KLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 521

Query: 241 REKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQNAKGAALKLLAES 300
           REKDTE+RRKV+VEKTD          GALVIFVVDASGSMALNRMQNAKGAALKLLAES
Sbjct: 522 REKDTENRRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAES 581

Query: 301 YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAE 360
           YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAE
Sbjct: 582 YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVRVGLNAE 641

Query: 361 KSGDVGRIMIVAITDGRANISLKRSNXXXXXXXXXXXXXXXXXLKDEILEVAGKIYKAGM 420
           KSGDVGRIMIVAITDGRANISLKRS                  LKDEILEVAGKIYK+GM
Sbjct: 642 KSGDVGRIMIVAITDGRANISLKRSTDPEAAAATDAPKPTSQELKDEILEVAGKIYKSGM 701

Query: 421 SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVISSATKEALSALKNS 473
           SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAV+S AT+EALSALK+S
Sbjct: 702 SLLVIDTENKFVSTGFAKEIARVAQGKYYYLPNASDAVVSMATREALSALKSS 754


>Medtr5g009070.2 | protoporphyrin IX magnesium chelatase subunit
           ChlD | HC | chr5:2082651-2069246 | 20130731
          Length = 641

 Score =  520 bits (1339), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 268/354 (75%), Positives = 283/354 (79%)

Query: 1   MSFEDRVAAVGVATEFQENSGQVFKMIEEETDTAKTQIILSREYLKDVTISTEQLKYLVI 60
           MSFE+RVAAVG+ATEFQ+N G+VFK ++E+TD AKTQIIL+REYLKDVTI  EQLKYLV+
Sbjct: 282 MSFENRVAAVGIATEFQDNCGEVFKTVDEDTDNAKTQIILAREYLKDVTIGKEQLKYLVL 341

Query: 61  EALRGGCQGHRAELYAARVAKCLAALEGREKVFVDDLKKAVELVILPRSIITEKXXXXXX 120
           EALRGG QGHRAELYAARVAKCLAALEGREKV+ DDLKKAVELVILPRSI+T+       
Sbjct: 342 EALRGGVQGHRAELYAARVAKCLAALEGREKVYADDLKKAVELVILPRSIVTDNPPEQQN 401

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPEEFIFDAEGGFVDE 180
                                                       LPEEFIFDAEGG VDE
Sbjct: 402 QPPPPPPPPQNQESNEEQNEEEDKEEEEEEEDDKDEEKEEQQEQLPEEFIFDAEGGLVDE 461

Query: 181 KLLFFAQQAQRKRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 240
           KLLFFAQQAQR+RGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR
Sbjct: 462 KLLFFAQQAQRRRGKAGRAKNVIFSEDRGRYIKPMLPKGPVKRLAVDATLRAAAPYQKLR 521

Query: 241 REKDTESRRKVYVEKTDXXXXXXXXXXGALVIFVVDASGSMALNRMQNAKGAALKLLAES 300
           REKDTE+RRKV+VEKTD          GALVIFVVDASGSMALNRMQNAKGAALKLLAES
Sbjct: 522 REKDTENRRKVFVEKTDMRAKRMARKAGALVIFVVDASGSMALNRMQNAKGAALKLLAES 581

Query: 301 YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTAVR 354
           YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTT  R
Sbjct: 582 YTSRDQVSIIPFRGDSAEVLLPPSRSIAMARKRLERLPCGGGSPLAHGLTTVCR 635