Miyakogusa Predicted Gene

Lj2g3v2088270.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2088270.1 tr|Q1ECR6|Q1ECR6_ARATH At4g23900 OS=Arabidopsis
thaliana PE=2 SV=1,71.77,0,NUCLEOSIDE DIPHOSPHATE KINASE,Nucleoside
diphosphate kinase; NUCDPKINASE,Nucleoside diphosphate
kina,gene.g42927.t1.1
         (206 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | H...   283   6e-77
Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | H...   162   3e-40
Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | H...   157   6e-39
Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | H...    48   7e-06

>Medtr8g099450.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:41955037-41951647 | 20130731
          Length = 234

 Score =  283 bits (725), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 150/212 (70%), Positives = 166/212 (78%), Gaps = 18/212 (8%)

Query: 13  AEGRAVGAASAVLFTNKAPLLASSY-RRAGSQSGPGAWISGXXXXXXXXXXXQDQEVHAA 71
           ++GRAV AASAV    K PL AS+Y RR  S +G  +WI+G           QDQEVHAA
Sbjct: 23  SQGRAVAAASAVASITKMPLFASNYGRRTASGNGSTSWIAGALALPAAAYILQDQEVHAA 82

Query: 72  E-----------------ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFN 114
           E                 ISEIISRFERKGYKLVGIKVL P+KEFA++HYHDLKERPFF+
Sbjct: 83  ELERTFIAIKPDGVQRGLISEIISRFERKGYKLVGIKVLHPTKEFAKQHYHDLKERPFFD 142

Query: 115 ELCEFLSSGPVVAMVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDG 174
            LC+FLSSGPV+AMVWEGQG I YGRKLIGATDPQKSEPGTIRGDLAV+VGRNIIHGSDG
Sbjct: 143 GLCDFLSSGPVIAMVWEGQGVIVYGRKLIGATDPQKSEPGTIRGDLAVVVGRNIIHGSDG 202

Query: 175 PETAKDEVNLWFKPEELVNFTSNAEKWVYGSN 206
           PETAKDE+NLWFKPEELV+FTSN+EKWVYG N
Sbjct: 203 PETAKDEINLWFKPEELVSFTSNSEKWVYGEN 234


>Medtr4g104030.1 | nucleoside diphosphate kinase-like protein | HC |
           chr4:43032291-43037070 | 20130731
          Length = 230

 Score =  162 bits (409), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 74/135 (54%), Positives = 96/135 (71%)

Query: 68  VHAAEISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVA 127
           V    + EIISRFE+KG+KL+G+K+   SKE A+ HY DL +R FF +L E+++SGPVV+
Sbjct: 94  VQRGLVGEIISRFEKKGFKLIGLKLFQCSKELAEEHYKDLNQRSFFPKLSEYITSGPVVS 153

Query: 128 MVWEGQGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFK 187
           M WEG G +   RKLIGAT+P ++EPGTIRGD AV  GRN+IHGSD PE  + E+ LWFK
Sbjct: 154 MAWEGVGVVPSARKLIGATNPLQAEPGTIRGDFAVETGRNVIHGSDSPENGEREIALWFK 213

Query: 188 PEELVNFTSNAEKWV 202
             EL  +T     W+
Sbjct: 214 EGELCEWTPVLHPWL 228


>Medtr8g007235.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:1369594-1366875 | 20130731
          Length = 149

 Score =  157 bits (397), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 72/131 (54%), Positives = 97/131 (74%), Gaps = 1/131 (0%)

Query: 73  ISEIISRFERKGYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVAMVWEG 132
           + EIISRFE+KG+ L G+K L   + FA++HY DL  +PFF+ L E++ SGPVVAM+WEG
Sbjct: 19  VGEIISRFEKKGFYLKGLKFLNVERAFAEKHYADLSAKPFFSGLVEYIVSGPVVAMIWEG 78

Query: 133 QGAISYGRKLIGATDPQKSEPGTIRGDLAVIVGRNIIHGSDGPETAKDEVNLWFKPEELV 192
           +  ++ GRK+IGAT+P +SEPGTIRGD AV +GRN+IHGSD  E+A  E+ LWF PE   
Sbjct: 79  KNVVTTGRKIIGATNPAQSEPGTIRGDFAVEIGRNVIHGSDSVESANKEIGLWF-PEGPA 137

Query: 193 NFTSNAEKWVY 203
            + S+   W+Y
Sbjct: 138 AWQSSLHSWIY 148


>Medtr8g021233.1 | nucleoside diphosphate kinase-like protein | HC |
           chr8:7615826-7619170 | 20130731
          Length = 215

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/69 (33%), Positives = 41/69 (59%)

Query: 84  GYKLVGIKVLVPSKEFAQRHYHDLKERPFFNELCEFLSSGPVVAMVWEGQGAISYGRKLI 143
           G+ +V  K++   +   +R Y +   + FF+ L ++++SGPV+ MV E   AI+  R L+
Sbjct: 99  GFSIVKEKIVQLDETTVKRFYAEHSSKNFFSSLVKYMTSGPVLTMVLEKDNAIADWRALM 158

Query: 144 GATDPQKSE 152
           G TD  K++
Sbjct: 159 GPTDASKAK 167