Miyakogusa Predicted Gene

Lj2g3v2088030.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2088030.1 Non Characterized Hit- tr|B9RCP4|B9RCP4_RICCO
Coiled-coil domain-containing protein, putative
OS=Ric,31.02,2e-18,coiled-coil,NULL; seg,NULL,CUFF.38527.1
         (240 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g099265.1 | myosin heavy chain-like protein | HC | chr8:41...   246   2e-65

>Medtr8g099265.1 | myosin heavy chain-like protein | HC |
           chr8:41783160-41786198 | 20130731
          Length = 802

 Score =  246 bits (628), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/262 (53%), Positives = 175/262 (66%), Gaps = 22/262 (8%)

Query: 1   MAQREEEIFALLREQES---GAST-----KADIDDLRLEFETLQEQKSKLKLQNEQSQKE 52
           M QR EEI   L+E +S   GAS      KA+++D+RL  + LQE K+KL+LQNE++QKE
Sbjct: 434 MIQRGEEISNFLKENDSDENGASIEIMALKAEVNDMRLALDNLQEHKTKLELQNERNQKE 493

Query: 53  CSERLAKMENLNVKLETQVADQEETIKKLTETIDQIHAENNQARIWSKKFRSYQQFTERK 112
            +E LAK+E LN KL  Q+ADQE+TIK  T TID+I+AE  Q  I S K    Q+ TERK
Sbjct: 494 YAESLAKIETLNTKLTGQIADQEKTIKDQTSTIDRINAEQKQTIITSNKLMLNQRSTERK 553

Query: 113 MDELTEEFRRKMEDNIRILHQRIHVAEQLNNENKDSHKMTRQRYEQENNILGEKVASYED 172
           M+EL E+ R+KMEDNIR+LHQRIHVAEQLNNENK S K+T+ RYE+EN ILGEKV+ YE+
Sbjct: 554 MEELAEKLRKKMEDNIRLLHQRIHVAEQLNNENKSSCKLTKIRYEEENKILGEKVSIYEE 613

Query: 173 EIRTLKASPEEVSXXXXXXXXXXXXDF--------------AAGKLEEYREYVLSLVSKM 218
           E+R LK     V+            D                A K+EE+RE V+S VSKM
Sbjct: 614 ELRRLKEGAANVTANASEETHSPVVDLKGFEFDAALNGLDVVAAKVEEHRECVMSNVSKM 673

Query: 219 MSEVQFAKGWVKKRNGEMKQLK 240
           + EVQFAK W+KK N EMKQLK
Sbjct: 674 LCEVQFAKDWIKKMNVEMKQLK 695