Miyakogusa Predicted Gene

Lj2g3v2087760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2087760.1 tr|G7J2L9|G7J2L9_MEDTR SDA1-like protein
OS=Medicago truncatula GN=MTR_3g086350 PE=4 SV=1,70.63,0,ARM
repeat,Armadillo-type fold; SDA1,SDA1; NUC130_3NT,Uncharacterised
domain NUC130/133, N-terminal;,CUFF.38549.1
         (775 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g086350.1 | SDA1-like protein | HC | chr3:39117666-3911082...   995   0.0  
Medtr4g006000.1 | SDA1-like protein | HC | chr4:467667-463369 | ...   370   e-102
Medtr4g006000.2 | SDA1-like protein | HC | chr4:467667-462929 | ...   370   e-102
Medtr4g005970.1 | hypothetical protein | LC | chr4:442317-446142...   330   4e-90

>Medtr3g086350.1 | SDA1-like protein | HC | chr3:39117666-39110826 |
           20130731
          Length = 812

 Score =  995 bits (2572), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 505/790 (63%), Positives = 587/790 (74%), Gaps = 37/790 (4%)

Query: 5   EKLSLPGPALQSKMKCDPQGNESELLLLRNQFDSSLYLFLEQATQSFTSISGIGTDPTVA 64
           EKLSLP  +LQSKMKCDP+G ESELLL+R+QF+SSL LF +Q+  +FTSISGI  DPTVA
Sbjct: 19  EKLSLP--SLQSKMKCDPEGYESELLLIRSQFNSSLELFQQQSAMNFTSISGISNDPTVA 76

Query: 65  KDLADRALFLSHVTPFYPNHLADFPSKLIQLLHEAHRTLPSGLRCHLAQALILLVNRSIV 124
           KDLAD+A+FLSH+T FYP HL+ FP+KL +LL  A RTLPSGLR  LA +LILLVNR IV
Sbjct: 77  KDLADKAMFLSHLTSFYPQHLSQFPNKLAELLRCAARTLPSGLRNDLANSLILLVNREIV 136

Query: 125 DIGETLSLFMELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQNILFVMLQGHN 184
            I +TLSLFMELQTLGDK L++L F HV+ +IKRMN KHK++AKNR+LQNILFVMLQ   
Sbjct: 137 TIKDTLSLFMELQTLGDKKLRELTFAHVVKSIKRMNQKHKDEAKNRALQNILFVMLQ--- 193

Query: 185 CSEKITNREKEQHAMRALVTLCELHRRKVWFDERTANAICNAALHPQSRIMITALQFLLD 244
                  +E E  A RALVTLCELH+R+ WFDERTANAIC A+ HP SRIMI+ L FLLD
Sbjct: 194 -------QEDEDRAKRALVTLCELHKRRTWFDERTANAICTASFHPSSRIMISTLCFLLD 246

Query: 245 YEKITXXXXXXXXXXXXXLTESPQVILSREKVYKASHQGTXXXXXXXXXXLERVIRSMKK 304
           YEKI               TESPQVIL RE VYKASHQGT          L+R+IR+MKK
Sbjct: 247 YEKIENYQDSDDESSDEEATESPQVILRRETVYKASHQGTSASKKKKKRQLDRIIRNMKK 306

Query: 305 QQRMSSEKRNNSYYSPLNHLLDAQGFAEKLFSYLQNCNERFEIKVMIMKLIARTIGLHQL 364
           ++R SSE+++N YYSPLNHL D QGF EKLFS LQ CNERFE+K+M++K+IARTIGLHQL
Sbjct: 307 KERGSSERKSNIYYSPLNHLKDPQGFVEKLFSRLQKCNERFEVKMMMLKVIARTIGLHQL 366

Query: 365 ILLNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAIEPLFKQIVNQFVHDRSPPEA 424
           +LLNFYP++QKYIQPHQRDVT+L+AA VQACHDMVPPDA+EPLFKQIVNQFVHDRS PEA
Sbjct: 367 MLLNFYPYLQKYIQPHQRDVTNLIAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEA 426

Query: 425 ITVGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIGVFREICPSLLVKK 484
           ITVG+NAVREIC+RMPLLM+EDLLQDLALYKKSHEK VS+AARSLI +FRE+CPSLL+KK
Sbjct: 427 ITVGINAVREICLRMPLLMSEDLLQDLALYKKSHEKGVSIAARSLITLFREVCPSLLIKK 486

Query: 485 DRGRPTNPTARPKAYGEVNIATEVPGAELLHIXXXXXXXXXXXXXXXXXXXXXE------ 538
           DRGRPT+P A+PKAYGEVN+A +VPGAELL I                     E      
Sbjct: 487 DRGRPTDPKAKPKAYGEVNVAADVPGAELLQIIDDDVEQESSHSDDCGSDNAQEDDQVSL 546

Query: 539 -----NQLCTDNTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 593
                NQL +DNTG                                              
Sbjct: 547 NSDDDNQLGSDNTGSDDDEAEDHDGVSDDENDRSSDYETSGDDADNVEDEGDDLEDSEED 606

Query: 594 XXXXVGEVSEYE-DND----GSVEAKSTLKETSKKRKFADFNGTLTAADTSLQALKKLTG 648
                G +SE+E D D    GSV+ K+TLK+ +KKRKF+DFN  LTAAD+SL+ALKKL G
Sbjct: 607 -----GGISEHEGDGDLHILGSVDTKTTLKDLAKKRKFSDFNDQLTAADSSLRALKKLAG 661

Query: 649 TTTGQALPESEDGFLSNEDFQRIKKLKAKNEARNALAQHGL----AIKVPSSDQLSLKRV 704
           TT   ALPE+EDG LSN DFQRIK+LKAKNEAR ALAQHGL      K+PSSDQL LKRV
Sbjct: 662 TTMENALPENEDGILSNADFQRIKELKAKNEARTALAQHGLLKSSTNKIPSSDQLGLKRV 721

Query: 705 DGAALEVHVKKKMNKEERLALVRAGREDRGKYCARTAVKQKKTGGLSNRQKEHKKKMPLA 764
           DG+ LE HVKKK+NKEERLA+VRAGRE+RG+Y AR AVKQ+KTGGLSN+QKEHKK+MP+ 
Sbjct: 722 DGSMLEAHVKKKLNKEERLAMVRAGREERGQYHARAAVKQRKTGGLSNKQKEHKKQMPMV 781

Query: 765 AKRYKVAKSK 774
           AKR KVA++K
Sbjct: 782 AKRKKVARTK 791


>Medtr4g006000.1 | SDA1-like protein | HC | chr4:467667-463369 |
           20130731
          Length = 487

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/508 (45%), Positives = 299/508 (58%), Gaps = 85/508 (16%)

Query: 14  LQSKMKCDPQGNESELLLLRNQFDSSLYLFLEQATQSFTSIS----GIGTDP-TVAKDLA 68
           LQSKM+  P    SEL  ++++F+SSL LF + A      I      + +DP ++A++LA
Sbjct: 31  LQSKMERSPYDYMSELFDIQSEFNSSLQLFYQHAAIKILPIDRDLVNVASDPISLAENLA 90

Query: 69  DRALFLSHVTPFYPNHLA--DFPSKLIQLLHEAHRTLPSGLRCHLAQALILLVNRSIVDI 126
           + A FL  V  +YP   A  DFPS+L  LL  + R +PS  R  LA AL L V RS+  I
Sbjct: 91  ETASFLGRVAIYYPERFALNDFPSRLFHLLCNSCRQIPSNPRFKLAHALTL-VFRSVC-I 148

Query: 127 GETLSLFMELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQNILFVMLQGHNCS 186
            ++LSLFMELQTLGD+ L KLA +H+  +I  +     N  + R LQ ++F ML      
Sbjct: 149 DQSLSLFMELQTLGDEKLTKLASNHIFQSIWDI---RPNQHRTRKLQTLMFNMLL----- 200

Query: 187 EKITNREKEQHAMRALVTLCELHRRKVWFDERTANAICNAALHPQSRIMITALQFLLDYE 246
                  K+  AMR LV L +L++R+VWFDE+TANAIC A+ H    IM  AL       
Sbjct: 201 -----EAKDAVAMRVLVILWKLYKREVWFDEKTANAICTASFHETLGIMTVALS------ 249

Query: 247 KITXXXXXXXXXXXXXLTESPQVILSREKVYKASHQGTXXXXXXXXXXLERVIRSMKKQQ 306
                           L ++ + ++  +K +  S  G                       
Sbjct: 250 ---------------SLLKNKEPMIENDKDHYDSDSGVD--------------------- 273

Query: 307 RMSSEKRNNSYYSPLNHLLDAQGFAEKLFSYLQNCNERFEIKVMIMKLIARTIGLHQLIL 366
                       SPLNHL D Q FAE+LFS LQ+  E  E+K+M++KLIAR IGLHQL L
Sbjct: 274 ------------SPLNHLTDKQSFAERLFSRLQHFKEGSEVKMMMLKLIARVIGLHQLTL 321

Query: 367 LNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAIEPLFKQIVNQFVHDRSPPEAIT 426
           L+FYPFV+KYIQPHQ D+ +LL AVVQACHD VP D ++PL  QIVNQFV+DRS PEAIT
Sbjct: 322 LDFYPFVRKYIQPHQPDIINLLPAVVQACHDKVPCDVVKPLLIQIVNQFVNDRSRPEAIT 381

Query: 427 VGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIGVFREICPSLLVKKDR 486
           +GLNAVREIC+RMP+LMN+DLLQDL LY+KSHEKA SVA RSLI +F+E CP        
Sbjct: 382 IGLNAVREICIRMPMLMNDDLLQDLDLYEKSHEKANSVAVRSLITLFQEFCPF------- 434

Query: 487 GRPTNPTARPKAYGEVNIATEVPGAELL 514
              +   A PKAY  V+ AT+V G ELL
Sbjct: 435 --DSKAKATPKAYEGVDFATDVLGDELL 460


>Medtr4g006000.2 | SDA1-like protein | HC | chr4:467667-462929 |
           20130731
          Length = 487

 Score =  370 bits (949), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 233/508 (45%), Positives = 299/508 (58%), Gaps = 85/508 (16%)

Query: 14  LQSKMKCDPQGNESELLLLRNQFDSSLYLFLEQATQSFTSIS----GIGTDP-TVAKDLA 68
           LQSKM+  P    SEL  ++++F+SSL LF + A      I      + +DP ++A++LA
Sbjct: 31  LQSKMERSPYDYMSELFDIQSEFNSSLQLFYQHAAIKILPIDRDLVNVASDPISLAENLA 90

Query: 69  DRALFLSHVTPFYPNHLA--DFPSKLIQLLHEAHRTLPSGLRCHLAQALILLVNRSIVDI 126
           + A FL  V  +YP   A  DFPS+L  LL  + R +PS  R  LA AL L V RS+  I
Sbjct: 91  ETASFLGRVAIYYPERFALNDFPSRLFHLLCNSCRQIPSNPRFKLAHALTL-VFRSVC-I 148

Query: 127 GETLSLFMELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQNILFVMLQGHNCS 186
            ++LSLFMELQTLGD+ L KLA +H+  +I  +     N  + R LQ ++F ML      
Sbjct: 149 DQSLSLFMELQTLGDEKLTKLASNHIFQSIWDI---RPNQHRTRKLQTLMFNMLL----- 200

Query: 187 EKITNREKEQHAMRALVTLCELHRRKVWFDERTANAICNAALHPQSRIMITALQFLLDYE 246
                  K+  AMR LV L +L++R+VWFDE+TANAIC A+ H    IM  AL       
Sbjct: 201 -----EAKDAVAMRVLVILWKLYKREVWFDEKTANAICTASFHETLGIMTVALS------ 249

Query: 247 KITXXXXXXXXXXXXXLTESPQVILSREKVYKASHQGTXXXXXXXXXXLERVIRSMKKQQ 306
                           L ++ + ++  +K +  S  G                       
Sbjct: 250 ---------------SLLKNKEPMIENDKDHYDSDSGVD--------------------- 273

Query: 307 RMSSEKRNNSYYSPLNHLLDAQGFAEKLFSYLQNCNERFEIKVMIMKLIARTIGLHQLIL 366
                       SPLNHL D Q FAE+LFS LQ+  E  E+K+M++KLIAR IGLHQL L
Sbjct: 274 ------------SPLNHLTDKQSFAERLFSRLQHFKEGSEVKMMMLKLIARVIGLHQLTL 321

Query: 367 LNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAIEPLFKQIVNQFVHDRSPPEAIT 426
           L+FYPFV+KYIQPHQ D+ +LL AVVQACHD VP D ++PL  QIVNQFV+DRS PEAIT
Sbjct: 322 LDFYPFVRKYIQPHQPDIINLLPAVVQACHDKVPCDVVKPLLIQIVNQFVNDRSRPEAIT 381

Query: 427 VGLNAVREICMRMPLLMNEDLLQDLALYKKSHEKAVSVAARSLIGVFREICPSLLVKKDR 486
           +GLNAVREIC+RMP+LMN+DLLQDL LY+KSHEKA SVA RSLI +F+E CP        
Sbjct: 382 IGLNAVREICIRMPMLMNDDLLQDLDLYEKSHEKANSVAVRSLITLFQEFCPF------- 434

Query: 487 GRPTNPTARPKAYGEVNIATEVPGAELL 514
              +   A PKAY  V+ AT+V G ELL
Sbjct: 435 --DSKAKATPKAYEGVDFATDVLGDELL 460


>Medtr4g005970.1 | hypothetical protein | LC | chr4:442317-446142 |
           20130731
          Length = 609

 Score =  330 bits (845), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 203/448 (45%), Positives = 257/448 (57%), Gaps = 62/448 (13%)

Query: 5   EKLSLPGPALQSKMKCDPQGNESELLLLRNQFDSSLYLFLEQATQSFTSISGI------- 57
           EKL+L    LQSK++ DP G   E+LL+ +QF+SSL LF +QA  +F S++GI       
Sbjct: 201 EKLNLQ--TLQSKVERDPIGYILEVLLIHSQFNSSLQLF-QQAAMNFISVNGIIDSDLTT 257

Query: 58  -GTDPTVAKDLADRALFLSHVTPFYPN--HLADFPSKLIQLLHEAHRTLPSGLRCHLAQA 114
             +DPTVA+DLA+RA+FL+ V P YP    LADFP +L+ LLH   + +PS  R  LA A
Sbjct: 258 VASDPTVAEDLAERAMFLTLVAPSYPTLFFLADFPIRLVYLLHSFAQFIPSMSRFKLAHA 317

Query: 115 LILLVNRSIVDIGETLSLFMELQTLGDKTLKKLAFDHVIHNIKRMNLKHKNDAKNRSLQN 174
           LILLVNR  V I ETL L MELQTLGDK L +    H++ NI+R  LK     K + LQ+
Sbjct: 318 LILLVNRQTVAIDETLPLLMELQTLGDKKLTRFVSQHLVVNIRR--LKRPAVIKTQKLQS 375

Query: 175 ILFVMLQGHNCSEKITNREKEQHAMRALVTLCELHRRKVWFDERTANAICNAALHPQSRI 234
           ++F MLQ           E E  A R LV L  L++RKVWFDE+TANAIC A+ HP  R 
Sbjct: 376 VMFKMLQ----------EENEAVAKRVLVILWRLYQRKVWFDEKTANAICTASFHPALRY 425

Query: 235 MITALQFLLDYEKITXXXXXXXXXXXXXLTESPQVILSREKVYKASHQGTXXXXXXXXXX 294
                  L  Y  +                E P +        K +H+            
Sbjct: 426 PFFFSSRLRLYHSLQVVEKDCDDSDSD--DELPHL--------KENHRDLTMYQLRKLG- 474

Query: 295 LERVIRSMKKQQRMSSEKRNNSYYSPLNHLLDAQGFAEKLFSYLQNCNERFEIKVMIMKL 354
             R+  + K  Q+  +E+ NN YYSPLNH++D QGFAEKLFS LQ  NE  E+K+M++K 
Sbjct: 475 -NRLPYNRKSLQKPLAERINNDYYSPLNHMIDRQGFAEKLFSCLQTYNEESEVKMMMLKF 533

Query: 355 IARTIGLHQLILLNFYPFVQKYIQPHQRDVTSLLAAVVQACHDMVPPDAIEPLFKQIVNQ 414
           IAR +G H+L LL FYPFVQKYI PHQ+DV +LLAAVV+ACHD                 
Sbjct: 534 IARIVGRHKLALLEFYPFVQKYIHPHQQDVVNLLAAVVEACHD----------------- 576

Query: 415 FVHDRSPPEAITVGLNAVREICMRMPLL 442
                   E  T GLNAVREIC+RMPL+
Sbjct: 577 --------EVFTAGLNAVREICIRMPLV 596



 Score = 57.8 bits (138), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 36/76 (47%), Positives = 42/76 (55%), Gaps = 7/76 (9%)

Query: 196 QHAMRALVTLCELHRRKVWFDERTANAICNAALHPQSRIMITALQFLLDYEKITXXXXXX 255
           Q A R LVTL EL++RKVWFDE+TANAIC A       I   AL FLL+ +K        
Sbjct: 103 QFAKRVLVTLWELYQRKVWFDEKTANAICTAM-----GIKTEALSFLLENKK--QIIEID 155

Query: 256 XXXXXXXLTESPQVIL 271
                   TESPQ I+
Sbjct: 156 DSDSDDEPTESPQAII 171