Miyakogusa Predicted Gene
- Lj2g3v2087720.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2087720.1 Non Characterized Hit- tr|G7ZX45|G7ZX45_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,25.78,6e-18,Rep_fac-A_C,Replication factor A, C-terminal;
Nucleic acid-binding proteins,Nucleic acid-binding, OB,CUFF.38510.1
(395 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g062030.1 | replication factor-A carboxy-terminal domain p... 151 9e-37
Medtr5g078250.1 | replication factor-A carboxy-terminal domain p... 145 8e-35
Medtr1g075850.1 | replication factor-A carboxy-terminal domain p... 131 9e-31
Medtr4g036240.3 | replication factor-A carboxy-terminal domain p... 98 1e-20
Medtr4g036240.2 | replication factor-A carboxy-terminal domain p... 98 2e-20
Medtr4g036240.1 | replication factor-A carboxy-terminal domain p... 97 3e-20
Medtr4g046077.1 | replication factor-A carboxy-terminal domain p... 95 9e-20
Medtr3g056270.1 | replication factor-A carboxy-terminal domain p... 95 1e-19
Medtr6g051890.1 | replication factor-A carboxy-terminal domain p... 95 2e-19
Medtr8g479260.1 | replication factor-A carboxy-terminal domain p... 91 2e-18
Medtr2g008650.1 | replication factor-A carboxy-terminal domain p... 91 2e-18
Medtr2g048560.1 | replication factor-A carboxy-terminal domain p... 90 3e-18
Medtr2g048550.1 | replication factor-A carboxy-terminal domain p... 82 1e-15
Medtr6g445520.1 | replication factor-A carboxy-terminal domain p... 78 1e-14
Medtr1g050500.1 | replication factor-A carboxy-terminal domain p... 76 7e-14
Medtr4g032585.1 | replication factor-A carboxy-terminal domain p... 75 1e-13
Medtr4g032565.1 | replication factor-A carboxy-terminal domain p... 75 2e-13
Medtr8g062060.1 | DUF223 domain protein | LC | chr8:25911934-259... 72 8e-13
Medtr4g134870.1 | AP2 domain class transcription factor | LC | c... 69 7e-12
Medtr7g110100.1 | replication factor-A carboxy-terminal domain p... 69 9e-12
Medtr4g040040.1 | replication factor-A carboxy-terminal domain p... 68 2e-11
Medtr3g081610.1 | transmembrane protein, putative | LC | chr3:36... 68 2e-11
Medtr0042s0170.1 | replication factor-A carboxy-terminal domain ... 67 3e-11
Medtr1g105785.1 | replication factor-A carboxy-terminal domain p... 62 1e-09
Medtr0032s0020.1 | PIF1-like helicase | LC | scaffold0032:18195-... 58 1e-08
Medtr7g051400.1 | replication factor-A carboxy-terminal domain p... 53 5e-07
>Medtr8g062030.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:25901653-25904109 | 20130731
Length = 575
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 165/333 (49%), Gaps = 20/333 (6%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPH 60
MI+ E+ D GKI C L GE V + + P++++QF KV+ F D+ +Q V
Sbjct: 163 MIIFEVTDHSGKIECALFGEYVALWNGFVSKGFEGLPVVVVQFAKVKIFRDKATLQNVKG 222
Query: 61 SSQLHINLEA--VSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLL 118
+++L +N + V F RL IQ+ + + + +M++E + +YPKKT++QL
Sbjct: 223 TTRLIVNPDVPEVIAFKDRLIGLGIQVPPTLTVLGGPS-KPSMEEEFLRMYPKKTISQLF 281
Query: 119 VEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLK 178
E+ G V + G + E W YP+C CH + +G Y C CD+ QM+ RY++K
Sbjct: 282 NSEEDGFFVVSAIVSGFVEGEEWWYPACKCHRSVTADSGAYYCKGCDKHVIQMVPRYKIK 341
Query: 179 IEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEF-PLEVEENVIGKKMLFKV 237
+ V DG +VFVL D +V +++K V + DV F P E+ + GK+ LFKV
Sbjct: 342 LRVDDGTGDSVFVLFDSDVHYLLEKQCSVLVAKSKGD-DVGFYPPEI-VMLKGKRFLFKV 399
Query: 238 ER--IAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTPLQ----GSLDDANLSEQFLQ 291
++ I+G ++G+ Y V RVC+D ++ F TP + G + S L
Sbjct: 400 DKPVISGGFFDGS--YRVKRVCADSSIVAKFAMNGYNYTPTESIRKGKMVFDECSPSPLD 457
Query: 292 AGESINGSCDERIMKRKLVGAAENVCLDVGFKL 324
G G D AA +V LD F L
Sbjct: 458 GGGVSVGVADTD------CNAASHVSLDGDFSL 484
>Medtr5g078250.1 | replication factor-A carboxy-terminal domain
protein | LC | chr5:33436158-33438920 | 20130731
Length = 517
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 19/284 (6%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPH 60
M++ E+ D GK C L G+ VD L + + PI+L+QF KV+ F D+ +Q V +
Sbjct: 163 MVIFEITDASGKCECALFGQYVDTLNKLMGKSGGGMPIILVQFAKVKIFRDKASLQNVMN 222
Query: 61 SSQLHINLEAVSIFTRRLFSQSIQINEHVGF-------IPY--QKLEMNMKDEMMNLYPK 111
++++ IN Q+ QI + V F +P + +++++++ + +PK
Sbjct: 223 TTRILINPP---------IEQADQIRKSVTFGSMDVSSVPRIGARSKVSLEEDFLRTFPK 273
Query: 112 KTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQM 171
KTL QL + GV V Y I GL+ E W YP+C CH + +G + C C + +QM
Sbjct: 274 KTLEQLHSTFEDGVFVVYATIGGLVDHEDWWYPACKCHRSVSADSGAFYCKGCAKHVFQM 333
Query: 172 IRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGK 231
+ R+R+K+ V D VFV+ D +++ ++ V +A+ +P E E+ + GK
Sbjct: 334 VPRFRVKVNVSDATNVGVFVVFDGDMQNLLNTPCSSLVSVAKAENAGHYPPEFEK-LKGK 392
Query: 232 KMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTP 275
KMLFKVE+ + + V RVC D +I+ F TP
Sbjct: 393 KMLFKVEKCTSSSIFFDGSFRVKRVCDDPAIIQSFHFVGGQCTP 436
>Medtr1g075850.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:33615520-33612872 | 20130731
Length = 528
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 138/296 (46%), Gaps = 49/296 (16%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPH 60
M+V E+ D GK C L G+ VD L + + PI+L+QF KV+ F D+ +Q V +
Sbjct: 157 MVVFEITDASGKCECALFGQYVDTLNKLMGKSAGGMPIILVQFAKVKIFRDKASLQNVIN 216
Query: 61 SSQLHINLEAVSIFTRRLFSQSIQINEHVGF-------IPY--QKLEMNMKDEMMNLYPK 111
++ + INL Q Q+ + V F IP + +++++++ + YPK
Sbjct: 217 TTWILINLP---------IEQDDQVRKSVTFGSTDVSSIPRIGSRSKVSLEEDFLRTYPK 267
Query: 112 KTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQM 171
KTL QL GV V Y I GL+ E W YP+C CH + +G + C C + +QM
Sbjct: 268 KTLEQLHSTFDDGVFVVYSTISGLVDHEDWWYPACKCHRSVSADSGAFYCKGCAKHVFQM 327
Query: 172 IRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGK 231
+ R+R+K+ V D + +P E E+ + GK
Sbjct: 328 VPRFRVKVNVSDAENAG------------------------------HYPAEFEK-LKGK 356
Query: 232 KMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTPLQGSLDDANLSE 287
+MLFK+E+ G + + V RVC D +I+ F + TP + S+ A + E
Sbjct: 357 RMLFKIEKCTGRSIFFDGSFRVKRVCDDPAIIQSFDTLGGQYTPSKISVAKAFVDE 412
>Medtr4g036240.3 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 417
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSSQLHINLEAV 71
K++C L G VD L L + T ++ +Q KV+ F D + IQ + ++L N V
Sbjct: 31 KLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCV 90
Query: 72 --SIFTRRLF------SQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQT 123
+ F R+ S Q+ P Q N P+ T+ L +Q
Sbjct: 91 EGTAFKNRMIENDDTPSPLTQLAVEPSIDPLQDFLFNT--------PRTTIQGLKDSQQE 142
Query: 124 GVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFD 183
G+ V G + ++ E W Y +C+C+ + G++ C +C+R ++ RY +K+ V D
Sbjct: 143 GMYVVLGTVKQIVNPENWYYTACMCNKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVD 202
Query: 184 GYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGL 243
A FVL DR+ + KS + A V P E+ ++ LFKVE +
Sbjct: 203 DSDCATFVLFDRDATMLFNKSCADILETHRADEGV-LPTEIAA-LVNCTYLFKVEFKTAI 260
Query: 244 TYNGTPCYEVIRVCSDLELIEMFRSGLA 271
+ + V +VC+D +I F++ A
Sbjct: 261 SPRFEQSFRVKKVCTDGVIINQFKAKWA 288
>Medtr4g036240.2 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830210-11833873 | 20130731
Length = 480
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSSQLHINLEAV 71
K++C L G VD L L + T ++ +Q KV+ F D + IQ + ++L N V
Sbjct: 94 KLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCV 153
Query: 72 --SIFTRRLF------SQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQT 123
+ F R+ S Q+ P Q N P+ T+ L +Q
Sbjct: 154 EGTAFKNRMIENDDTPSPLTQLAVEPSIDPLQDFLFNT--------PRTTIQGLKDSQQE 205
Query: 124 GVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFD 183
G+ V G + ++ E W Y +C+C+ + G++ C +C+R ++ RY +K+ V D
Sbjct: 206 GMYVVLGTVKQIVNPENWYYTACMCNKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVD 265
Query: 184 GYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGL 243
A FVL DR+ + KS + A V P E+ ++ LFKVE +
Sbjct: 266 DSDCATFVLFDRDATMLFNKSCADILETHRADEGV-LPTEIAA-LVNCTYLFKVEFKTAI 323
Query: 244 TYNGTPCYEVIRVCSDLELIEMFRSGLA 271
+ + V +VC+D +I F++ A
Sbjct: 324 SPRFEQSFRVKKVCTDGVIINQFKAKWA 351
>Medtr4g036240.1 | replication factor-A carboxy-terminal domain
protein | HC | chr4:11830642-11833873 | 20130731
Length = 560
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSSQLHINLEAV 71
K++C L G VD L L + T ++ +Q KV+ F D + IQ + ++L N V
Sbjct: 174 KLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCV 233
Query: 72 --SIFTRRLF------SQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQT 123
+ F R+ S Q+ P Q N P+ T+ L +Q
Sbjct: 234 EGTAFKNRMIENDDTPSPLTQLAVEPSIDPLQDFLFNT--------PRTTIQGLKDSQQE 285
Query: 124 GVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFD 183
G+ V G + ++ E W Y +C+C+ + G++ C +C+R ++ RY +K+ V D
Sbjct: 286 GMYVVLGTVKQIVNPENWYYTACMCNKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVD 345
Query: 184 GYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGL 243
A FVL DR+ + KS + A V P E+ ++ LFKVE +
Sbjct: 346 DSDCATFVLFDRDATMLFNKSCADILETHRADEGV-LPTEIAA-LVNCTYLFKVEFKTAI 403
Query: 244 TYNGTPCYEVIRVCSDLELIEMFRSGLA 271
+ + V +VC+D +I F++ A
Sbjct: 404 SPRFEQSFRVKKVCTDGVIINQFKAKWA 431
>Medtr4g046077.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:16158485-16160769 | 20130731
Length = 405
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 31/285 (10%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPH 60
M+V +L D G C L G+ VD L + P++L+QF KV+ F
Sbjct: 61 MVVFQLTDDSGSCECALFGKYVDALNKLMRKAVDGMPVVLVQFAKVKIF----------K 110
Query: 61 SSQLHINLEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVE 120
L I+ + + +F + S I I+ P + +++++ ++++PKKTL QL
Sbjct: 111 GISLTIS-QVIVLFGYFVSSVGINISSVPKLGPC--VRASVQEDFLHMHPKKTLAQLHDT 167
Query: 121 EQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIE 180
+ G V Y G + E YP+C CH + + Y C C + +QM+ RYR+KI
Sbjct: 168 PEDGTFVVYATFNGFVDGEDCWYPACKCHRSVAPDSEAYYCKGCVKNVFQMVPRYRVKIN 227
Query: 181 VFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERI 240
V D AVFV+ +V+ ++ S V +A+ + E K++ +
Sbjct: 228 VSDATSVAVFVMFAGDVQNILNLSCSSLVSASKAENAGFYSTEF------AKLIRRC--- 278
Query: 241 AGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTPLQGSLDDANL 285
C V RVC + +I+ F S TP + + +L
Sbjct: 279 ---------CLRVKRVCDEPSVIQSFDSIGVEHTPSENPVPGTSL 314
>Medtr3g056270.1 | replication factor-A carboxy-terminal domain
protein | HC | chr3:22409504-22413525 | 20130731
Length = 719
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 18/268 (6%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSSQLHINLEAV 71
K++C L G VD L L + T ++ +Q KV+ F D + IQ + ++L N
Sbjct: 333 KLQCTLFGTYVDELNTFLATGETANVVVSIQLAKVKVFQDNIHIQNCLNCTRLKFNPVCA 392
Query: 72 --SIFTRRLF------SQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQT 123
+ F R+ S Q+ P Q N P+ T+ L +Q
Sbjct: 393 EGTAFKNRMIENDDTPSPLTQLAVEPSIDPLQDFLFNT--------PRTTIQGLKDSQQE 444
Query: 124 GVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFD 183
G+ V G + ++ E W Y +C+C+ + G++ C +C+R ++ RY +K+ V D
Sbjct: 445 GMYVVLGTVKQIVNPENWYYTACMCNKSVYPAEGMHFCEKCNRHVVKVFPRYSIKVRVVD 504
Query: 184 GYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGL 243
A FVL DR+ + KS + A V P E+ ++ LFKVE +
Sbjct: 505 DSDCATFVLFDRDATMLFNKSCADILETHRADEGV-LPTEIGA-LVNCTYLFKVEFKTAI 562
Query: 244 TYNGTPCYEVIRVCSDLELIEMFRSGLA 271
+ + V +VC+D +I F++ A
Sbjct: 563 SPRFEQSFRVKKVCTDGVIINQFKAKWA 590
>Medtr6g051890.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:18071124-18068908 | 20130731
Length = 399
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 12/210 (5%)
Query: 73 IFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGI 132
I R+F I +E V F P ++ M+D + LYP+KT+ +L + G+ V G +
Sbjct: 152 ISVERIFVHGIGSSEPVPF-PGPRVRPYMEDAFLGLYPQKTIAELQGTSKDGLFVVSGIV 210
Query: 133 VGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVL 192
GL+ DE W YP+C CH L+ G Y C C + M+ R ++ I V DG AVFVL
Sbjct: 211 DGLVEDEEWYYPACTCHRSLMPDYGAYYCKDCAEHVFHMVPRCKVNIHVTDGTDEAVFVL 270
Query: 193 SDREVK-------EVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGLTY 245
D +VK E+ + DV+ L+ + ++ +AG
Sbjct: 271 FDYDVKRSSVVAGEIQNLGSHSVTPTVQLGSDVDLGLDSSSKMAEDEVKVVDPLVAGGDV 330
Query: 246 NGTPCYEVIRVCSDLELIEMFRSGLAVTTP 275
+ +V++ +E F SGL VT P
Sbjct: 331 SSKDDVDVVQESQ----VEDFVSGLIVTPP 356
>Medtr8g479260.1 | replication factor-A carboxy-terminal domain
protein | LC | chr8:33777150-33779789 | 20130731
Length = 555
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 34/388 (8%)
Query: 3 VIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSS 62
VIEL KI+C L G VD L + S I+++Q K +SF D++ +Q +
Sbjct: 167 VIELEAGGFKIQCTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCT 226
Query: 63 QLHINLEA-VSIFTRRLFSQSIQINEHVGFIPYQ-KLEMNMKDEMMNLYPKKTLTQLLVE 120
++ ++ R S+++ +G Q + +++ ++E + P+ T+ L
Sbjct: 227 KVIFKPTCDAAVSMRNRLSETVDTPSPLGLTQLQPEAKLDPREEFLYGTPRNTMQGLKDA 286
Query: 121 EQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIE 180
V V G I ++ E + Y +CIC +I + ++ C +CDR ++ RY L++
Sbjct: 287 TTNEVYVVLGTIKRIVNRENFWYTACICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVR 346
Query: 181 VFDGYQSAVFVLSDREVKEVMKKS-----FEKFVIPFEAQLDVEFPLEVEENVIGKKMLF 235
D A V+ D+E + KS E V E L P E+ +IGK LF
Sbjct: 347 AIDHTDCATLVIFDKEATALFNKSCVDMLAEHGVAVSEGHL----PPEI-AGIIGKTFLF 401
Query: 236 KVERIAGLTYNGTPCYEVIRVCSDLELIEMFRS--GLAVTTPLQGSLDDANLSEQFLQAG 293
KVE + V ++C+ ++I F+ G + +++ ++LS L G
Sbjct: 402 KVETKVDQNPRFEQSFRVRKICAMPDVINEFKKKWGEEEAAFFKNAMEASSLS-VLLDKG 460
Query: 294 ES--INGSCD----------ERIMKRK--LVGAAENVC---LDVGFKLNQNESEVMENHE 336
++ I GS D E + K K L+G + L F + E +V+E +
Sbjct: 461 KAPMIAGSSDVLNQDDFSLTEPVEKCKEMLLGEGSGIVTQDLLPKFAVADCEFDVVEISQ 520
Query: 337 KGMLGEIQRMKALKIYDGDQCNVGEEML 364
KG +R D D+ N+ +ML
Sbjct: 521 KGSAASSKR--GSPTTDDDEMNMSLKML 546
>Medtr2g008650.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:1569207-1566568 | 20130731
Length = 555
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 168/388 (43%), Gaps = 34/388 (8%)
Query: 3 VIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSS 62
VIEL KI+C L G VD L + S I+++Q K +SF D++ +Q +
Sbjct: 167 VIELEAGGFKIQCTLFGSYVDDLNSFIASGDIPNAIVIIQLAKAKSFQDKIHVQNCIGCT 226
Query: 63 QLHINLEA-VSIFTRRLFSQSIQINEHVGFIPYQ-KLEMNMKDEMMNLYPKKTLTQLLVE 120
++ ++ R S+++ +G Q + +++ ++E + P+ T+ L
Sbjct: 227 KVIFKPTCDAAVSMRNRLSETVDTPSPLGLTQLQPEAKLDPREEFLYGTPRNTMQGLKDA 286
Query: 121 EQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIE 180
V V G I ++ E + Y +CIC +I + ++ C +CDR ++ RY L++
Sbjct: 287 TTNEVYVVLGTIKRIVNRENFWYTACICSKAVIPDSQMFYCEKCDRHVKKVFSRYCLRVR 346
Query: 181 VFDGYQSAVFVLSDREVKEVMKKS-----FEKFVIPFEAQLDVEFPLEVEENVIGKKMLF 235
D A V+ D+E + KS E V E L P E+ +IGK LF
Sbjct: 347 AIDHTDCATLVIFDKEATALFNKSCVDMLAEHGVAVSEGHL----PPEI-AGIIGKTFLF 401
Query: 236 KVERIAGLTYNGTPCYEVIRVCSDLELIEMFRS--GLAVTTPLQGSLDDANLSEQFLQAG 293
KVE + V ++C+ ++I F+ G + +++ ++LS L G
Sbjct: 402 KVETKVDQNPRFEQSFRVRKICAMPDVINEFKKKWGEEEAAFFKNAMEASSLS-VLLDKG 460
Query: 294 ES--INGSCD----------ERIMKRK--LVGAAENVC---LDVGFKLNQNESEVMENHE 336
++ I GS D E + K K L+G + L F + E +V+E +
Sbjct: 461 KAPMIAGSSDVLNQDDFSLTEPVEKCKEMLLGEGSGIVTQDLLPKFAVADCEFDVVEISQ 520
Query: 337 KGMLGEIQRMKALKIYDGDQCNVGEEML 364
KG +R D D+ N+ +ML
Sbjct: 521 KGSAASSKR--GSPTTDDDEMNMSLKML 546
>Medtr2g048560.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21416239-21412307 | 20130731
Length = 549
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 127/274 (46%), Gaps = 10/274 (3%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPH 60
MI IEL + + L G VD L L S T+ ++ + K++ F Q IQ +
Sbjct: 163 MIPIELDYDGFRFKVTLFGPYVDELNAFLASGETENVVVAVLLTKIKIFQGQATIQNTIN 222
Query: 61 SSQLHIN--LEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLL 118
++++ N A + +R+ + + I + +++++++ +NL P T+ L
Sbjct: 223 ATKVLFNPTFTAALLLKKRMVENDDSPSPGISKIT-EASKVSVEEDFLNLSPMTTVEGLK 281
Query: 119 VEEQTGVCVTYGGIVGLIRDEPWTYPSCI-CHDELIVRTGVYECVRCDRFFYQMIRRYRL 177
+ +G + ++ D W Y SC+ C+ ++ +Y C +C++ + RY +
Sbjct: 282 DCAEEKCFAVFGTVNVIVDDSDWWYTSCVVCNKKVYPDEKMYFCSKCNKHVLNVTPRYMI 341
Query: 178 KIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIG---KKML 234
K+ V D SA FVL DR+ E+ KK+ + D EV ++++ K L
Sbjct: 342 KMRVVDHTDSATFVLFDRDAAELFKKTCADMIESCGMGTDAS---EVPKDILAMVEKSYL 398
Query: 235 FKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRS 268
FKVE G + Y V RV +D L+E F++
Sbjct: 399 FKVETNLGSSTMYEKSYRVKRVTADPVLVEKFQT 432
>Medtr2g048550.1 | replication factor-A carboxy-terminal domain
protein | LC | chr2:21410361-21406613 | 20130731
Length = 495
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 17/272 (6%)
Query: 13 IRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRS-FADQMIIQMVPHSSQLH------ 65
I+C L G VD+L + I+ + F KV A +++I V S +
Sbjct: 175 IQCSLFGTFVDQLNNFVAKGDISNVIVAVLFAKVEYVIAGKLVISTVTGSKLVFNPLFTT 234
Query: 66 -INLEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQTG 124
I+L+ ++ R L + SI+I + V ++M D L PK T++ L E
Sbjct: 235 AIDLKGSMMYKRPLTTPSIRIMDDV------DRYVHMYDHW-GLSPKATISGLSFCEVGR 287
Query: 125 VCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDG 184
+ YG I L+ D+ W Y C+C + G++ C +C + + + RY++K VFD
Sbjct: 288 TYIVYGNISELLLDDGWWYVGCVCKKRVFPDGGMFFCAKCSKHVFNVKPRYKVKFNVFDH 347
Query: 185 YQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEF-PLEVEENVIGKKMLFKVERIAGL 243
A F++ D+ ++ ++++ + V DV+ P E+ + +LFKV A L
Sbjct: 348 TGEANFIVFDKALEMFLQRTCAELVGANGMIADVDHVPAEL-VGMTNNPLLFKVAVDASL 406
Query: 244 TYNGTPCYEVIRVCSDLELIEMFRSGLAVTTP 275
Y V ++ SD++ ++ F + P
Sbjct: 407 DKVAEKVYVVKQMTSDIKSVQEFADLYKIRAP 438
>Medtr6g445520.1 | replication factor-A carboxy-terminal domain
protein | HC | chr6:15886770-15884303 | 20130731
Length = 428
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/369 (19%), Positives = 163/369 (44%), Gaps = 26/369 (7%)
Query: 1 MIVIELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMI------ 54
M+ +EL K + + G+ + L + + T + I+++ KV + D+
Sbjct: 22 MVAMELDYDGFKFKVTIFGQYAEELNAFVAAGETDKVIVVVLLAKVMIWQDRFFPICMAA 81
Query: 55 -IQMVPHSSQLHINLEAVSI--FTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPK 111
+Q +S++L N + + +R+ + + + F+ + +D+ + + P+
Sbjct: 82 TVQNTIYSTKLIFNPDLIVAHDLKKRMVGKDGVPSPGITFL-QDPSRITEEDDFLKITPR 140
Query: 112 KTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQM 171
KT+ L V + +I + W Y +C+C+ +++ ++ C +C++ +
Sbjct: 141 KTVEDLKECAMESCFVVKATVKFVIDTDEWWYTACVCNKKVVPDEKMFFCAKCNKHVIHV 200
Query: 172 IRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGK 231
RY +K+ V D SA FV+ DR+ ++KK+ + + P E+ +++
Sbjct: 201 CPRYMIKVRVIDETDSATFVIFDRDATLLLKKTAADVIESMGSDESGTLPKEI-SSLVES 259
Query: 232 KMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTP-LQGSLDDANLSEQFL 290
LFKVE Y V R+ ++++L++ F +G+ P ++GS + +E
Sbjct: 260 TFLFKVETNISTDARFEKSYRVRRISNNVDLLKRF-TGVPTEAPVVEGSFEAVENAEN-- 316
Query: 291 QAGESINGSCDERIMKRKLVGAAENVCLDVGFKLNQNESEV--------MENHEKGMLGE 342
S+N + ++ K++G ++V + L +E +V + G G
Sbjct: 317 --DSSVNQNLLKKFGDSKVIG-TKDVDAEKAVDLTNDEVDVTPAKRSCPFDGEGSGGNGP 373
Query: 343 IQRMKALKI 351
++ +K +K+
Sbjct: 374 VKLLKNIKV 382
>Medtr1g050500.1 | replication factor-A carboxy-terminal domain
protein | LC | chr1:19683996-19681538 | 20130731
Length = 543
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 112/266 (42%), Gaps = 25/266 (9%)
Query: 11 GKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVR---------SFADQMIIQMVPHS 61
G+ CVL G V + ++ P+++LQF K+ SF D + + PH
Sbjct: 92 GRFDCVLYGAYVGLFQEMVNNSSPGLPVVVLQFAKINRETGAFYLESFKDVTRLLLNPHI 151
Query: 62 SQLHINLEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEE 121
+ ++ R +S V + + L + + +YP K + +L+
Sbjct: 152 GE--------ALQFRNDILRSDPCCPLVRWRVVRSLITSDTSQFRRMYPVKKVYELVQSV 203
Query: 122 QTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEV 181
+ G+ V Y +V I W YP C+C L +R G Y C CD ++++ R+KI V
Sbjct: 204 EDGLFVVYAEVVECIESHTWWYPMCVCQRILPMRNGAYYCRHCDMSVFKVM--LRVKILV 261
Query: 182 FDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIA 241
D +AV D + + K++ A +E+ + GKK+LF V +
Sbjct: 262 VDDTDAAVLEFFDDLLHGISSKNYNALGPNVVA---TAIGMELLQ---GKKLLFIVRKTL 315
Query: 242 GLTYNGTPCYEVIRVCSDLELIEMFR 267
G +EV+++ D LI +R
Sbjct: 316 GFNATSGDAFEVVQITDDQGLINAYR 341
>Medtr4g032585.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11228071-11229546 | 20130731
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 83/169 (49%), Gaps = 7/169 (4%)
Query: 101 MKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCI-CHDELIVRTGVY 159
+ D+MMN T+ L+ G + + I G+ + W Y +C C + + G
Sbjct: 9 LADDMMNT-KNMTIEDLIESTDLGNVIVFASICGIEPEYGWYYDACTKCAGRITIVAGRM 67
Query: 160 ECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLD-- 217
C RC + ++ R++L ++V D S F+L DR V + +S + I + Q D
Sbjct: 68 FCPRC-KQSRNVVPRFKLHVQVMDTTGSTSFILFDRNVSNYVGRSVQDL-IDAQGQGDNS 125
Query: 218 VEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMF 266
+ +P ++E ++GKKMLFKV+ G + Y V R D ELI+MF
Sbjct: 126 LGYPADLEV-LVGKKMLFKVDITNGNLLHNWRNYGVKRTSDDAELIQMF 173
>Medtr4g032565.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:11217564-11219039 | 20130731
Length = 286
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 7/169 (4%)
Query: 101 MKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCI-CHDELIVRTGVY 159
+ D+MMN T+ L+ G + + I G+ + W Y +C C + + G
Sbjct: 9 LADDMMNT-KNMTIEDLIESTDLGNVIVFASICGIEPEYGWYYDACTKCAGRITIVAGRM 67
Query: 160 ECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLD-- 217
C RC + + R++L ++V D S F+L DR V + +S + I + Q D
Sbjct: 68 FCPRC-KQSRNAVPRFKLHVQVMDTTGSTSFILFDRNVSNYVGRSVQDL-IDAQGQGDNS 125
Query: 218 VEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMF 266
+ +P ++E ++GKKMLFKV+ G + Y V R D ELI+MF
Sbjct: 126 LGYPADLEV-LVGKKMLFKVDITNGNLLHNWRNYGVKRTSDDAELIQMF 173
>Medtr8g062060.1 | DUF223 domain protein | LC |
chr8:25911934-25914219 | 20130731
Length = 530
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 17/283 (6%)
Query: 4 IELVDPVGKIRCVLLGEVVDRLMLHLCSNWTKRPILLLQFVKVRSFADQMIIQMVPHSSQ 63
EL D K C L G+ + L + PI+++QF +V + ++ ++
Sbjct: 166 FELTDERTKFECALTGKYIGIFHELLKKVQLRLPIVVIQFARVIAENGTPVVCAEKDITK 225
Query: 64 LHIN--LEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEE 121
+ N + V+ F RL + + V F P ++ +++ +YPKK++ +LLV
Sbjct: 226 VSFNPTIPEVTQFQDRLLIAGPK-SSIVKFNPNFRMSVDVSLSFSKMYPKKSIKELLVPP 284
Query: 122 QTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEV 181
+ G V + G + + W YP C C+ + G Y C C R + + ++R ++ V
Sbjct: 285 EGGFFVVCARVAGFRKVDQWFYPVCDCNSFMGNEFGFYLCDVCHRTSFNVTPKFRFELSV 344
Query: 182 FDGYQSAVFVLSDREVKEV--MKKSFEKFVIPFEAQLDVEFPLEVE--ENVIGKKMLFKV 237
D A+F + DR + ++ +K SF LD + PL + + G++ +F V
Sbjct: 345 EDDGGVAIFHILDRILLDISSLKCSF----------LDRKLPLTRGHLQKLNGRECMFLV 394
Query: 238 ERIAGLTYNGTPCYEVIRVCSDLELIEMFRSGLAVTTPLQGSL 280
++ + ++V+RV D +++ + TP + S
Sbjct: 395 KKYHAARFLPGYGFDVLRVSDDSKVVRSYYDEGRSYTPSKVSF 437
>Medtr4g134870.1 | AP2 domain class transcription factor | LC |
chr4:56537430-56539491 | 20130731
Length = 425
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 101 MKDEMMNLYPKKTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYE 160
++DE + +PKKT+ +L+ ++ GV V G + GL+ W Y + C+ ++ +G Y
Sbjct: 140 LEDEFIRTHPKKTIDELVCLDEEGVFVVGGKVEGLVEGAEWWYSAYRCNRSVLAASGSYY 199
Query: 161 CVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEF 220
C C +R ++K++V DG + VL D +V ++KKS K V + + +
Sbjct: 200 CNGC-------VRHCKVKVKVSDGECKVILVLFDNDVSFIVKKSCAKLVADVKGENADFY 252
Query: 221 PLEVEENVIG 230
P E+ +N+IG
Sbjct: 253 PSEL-KNLIG 261
>Medtr7g110100.1 | replication factor-A carboxy-terminal domain
protein | HC | chr7:45127464-45130150 | 20130731
Length = 526
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 20/282 (7%)
Query: 4 IELVDPVG-KIRCVLLGEVVDRLMLHLCSNWTKRP-ILLLQFVKVRSFADQMIIQMVPHS 61
I L D G +I C L R+ +L + P I+++ K++ + M I +
Sbjct: 165 ITLEDTEGNRIHCSLWDTYAIRMDAYLTVHDPNSPVIVVIHLCKLKKYYATMGISNAFYG 224
Query: 62 SQLHINLE--AVSIFTRRLFSQSIQINEHV----GFIPYQKLEMNMKDEMMNLYPKKTLT 115
++L ++ + V F ++ +++ + V G + E ++ MM T+
Sbjct: 225 TKLILDDDHPVVKEFLSKIDGADVEVTQGVSQITGSLIVPLAEDMLQSRMM------TIE 278
Query: 116 QLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCI-CHDELIVRTGVYECVRCDRFFYQMIRR 174
L+ V + I+G+ + W Y +C C + + G C RC++ + R
Sbjct: 279 DLIESSDQCVVIVLASIIGIEAEYSWYYDACTKCAGRIKIIAGRMFCPRCNQS-RNAVPR 337
Query: 175 YRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIP-FEAQLDVEFPLEVEENVIGKKM 233
++L ++V D S F+L DR V + KS + + + D +P +++ ++GKKM
Sbjct: 338 FKLHVQVMDNTGSTSFILFDRNVSNYVGKSVQDLIDSQGQGNNDKGYPSDLDV-LVGKKM 396
Query: 234 LFKVERIAGLTYNGTPCYEVIRVCSDLELIEMF--RSGLAVT 273
LFKVE G + Y V R D +LI F R L +T
Sbjct: 397 LFKVEITDGNLHLSWRNYGVKRTTDDPDLISQFSKRHNLKIT 438
>Medtr4g040040.1 | replication factor-A carboxy-terminal domain
protein | LC | chr4:14260390-14261092 | 20130731
Length = 168
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 69/149 (46%), Gaps = 14/149 (9%)
Query: 136 IRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDR 195
+ D+ W + SCICH++++ + Y C RC++ + R+R+ V D SA F++ D
Sbjct: 12 VTDDGWWFLSCICHEQVVPDSPAYYCERCNKHVLMITPRFRITFHVTDNTGSATFLMHDS 71
Query: 196 EVKEVMKKSFEKFVIPFEAQL----DVEFPLEVEE---NVIGKKMLFKVERIAGLTYNGT 248
E F IP L +V V + N++GK LFKV G +G
Sbjct: 72 VAAEF-------FGIPCSKMLEFGENVGMSSYVPDELLNMVGKCYLFKVFSKVGAGCDGE 124
Query: 249 PCYEVIRVCSDLELIEMFRSGLAVTTPLQ 277
CY + ++ D EL+ F+ +V L
Sbjct: 125 KCYPISKINDDEELLGRFKRHNSVVIKLD 153
>Medtr3g081610.1 | transmembrane protein, putative | LC |
chr3:36944252-36945254 | 20130731
Length = 221
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 75/175 (42%), Gaps = 36/175 (20%)
Query: 95 QKLEMNMKDEMMNLYPKKTLTQLLVEEQTG---VCVTYGGIVGLIRDEPWTYPSCICHDE 151
+ +++D+ + +YPK+TL+QL + G VC T G E W YP+C CH
Sbjct: 26 SRARASVEDDFLRMYPKRTLSQLNSSNEDGLFIVCATIDG-------EDWWYPACKCHRS 78
Query: 152 LIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKFVIP 211
+ +G Y C C + + M+ R + I S + +S E F K
Sbjct: 79 VTPDSGAYYCKDCVKHVFHMVPRL-ICIPC-----STLVSVSKAENAGFYPTHFNK---- 128
Query: 212 FEAQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNGTPCYEVIRVCSDLELIEMF 266
+ G+KMLFKVER +++ + V RVC + ++E F
Sbjct: 129 ----------------LKGRKMLFKVERCTSVSFMSDGSFRVKRVCEEASVLEQF 167
>Medtr0042s0170.1 | replication factor-A carboxy-terminal domain
protein | LC | scaffold0042:77181-79334 | 20130731
Length = 400
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 149 HDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAVFVLSDREVKEVMKKSFEKF 208
H + +G Y C C + +QM+ RY++KI V DG VFV+ D ++ ++ K
Sbjct: 143 HRGVTPDSGAYYCKGCSKHVFQMVPRYKVKIRVDDGDGCVVFVVFDGDMHNLLGKQCSDL 202
Query: 209 VIPFEAQLDVEFPLEVEENVIGKKMLFKVER--IAGLTYNGTPCYEVIRVCSDLELIEMF 266
V +A+ +V F + + G +LFKVE+ +A + ++G+ Y V R+CSD +IE F
Sbjct: 203 VSAAKAE-NVGFYPDEHLKLKGMYLLFKVEKSSVASVLFDGS--YRVRRICSDAAVIESF 259
Query: 267 RSGLAVTTPLQGSLDDANLSEQFLQAGESING 298
+ V + EQ + +NG
Sbjct: 260 TAQATVC-----------VDEQVVPGPSDVNG 280
>Medtr1g105785.1 | replication factor-A carboxy-terminal domain
protein | HC | chr1:47732917-47735741 | 20130731
Length = 566
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 118/259 (45%), Gaps = 9/259 (3%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRP-ILLLQFVKVRSFADQMIIQMVPHSSQLHI--NL 68
++ C L +R+ L ++ P I+L+Q K++ + M + ++L + +L
Sbjct: 174 RVHCTLWANYAERMNSFLAAHDPSSPVIVLIQQCKLKKYQGIMGVSNAFFGTKLLLEGDL 233
Query: 69 EAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVT 128
F ++ +Q+++ + + +++ D+M+ + T+ L+ + +
Sbjct: 234 PEAIEFKSKIDGGDVQVSQSISQNTTSTV-VSLVDDMLQT-KRMTIEDLIEATEQCQGIV 291
Query: 129 YGGIVGLIRDEPWTYPSCI-CHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQS 187
I G+ + W Y +C C + G C +C+ + R++L ++V D S
Sbjct: 292 LATICGIESEYSWYYQACTKCAGRVRTVAGRLYCGKCNTG-RNAVPRFKLHVQVMDNTGS 350
Query: 188 AVFVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNG 247
F+L DR V + ++ + +I + ++P ++ ++ +GK+MLFKVE G +
Sbjct: 351 TSFILFDRNVSSYVNRTVQD-MIDAQPNNSSDYPSDL-DSFVGKRMLFKVEVSDGNLLHN 408
Query: 248 TPCYEVIRVCSDLELIEMF 266
Y V R ++ ++I F
Sbjct: 409 WRNYAVKRTTAEEDVINQF 427
>Medtr0032s0020.1 | PIF1-like helicase | LC |
scaffold0032:18195-20915 | 20130731
Length = 586
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 52 QMIIQMVPHSSQLHINLEAVSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPK 111
+I +P S+ ++ + RL + + + V F P + ++ +YPK
Sbjct: 121 SLITSAIPDSTNRLSSVLKFELTDERLLTAGPK-SSIVKFNPNFGMCDDVSLSFSKMYPK 179
Query: 112 KTLTQLLVEEQTGVCVTYGGIVGLIRDEPWTYPSCICHDELIVRTGVYECVRCDRFFYQM 171
KT+ +LLV + G V + G ++ + W YP C C+ + G Y C C R + +
Sbjct: 180 KTIKELLVTPEGGFFVVCARVAGFMKVDQWFYPVCDCNSFMGNEFGFYLCDVCHRTSFNV 239
Query: 172 IRRYRLKIEVFDGYQSAVFVLSDR 195
++R ++ V D A+F + D
Sbjct: 240 TPKFRFEVSVEDDGGVAIFHILDH 263
>Medtr7g051400.1 | replication factor-A carboxy-terminal domain
protein | LC | chr7:18001910-18004476 | 20130731
Length = 542
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/257 (19%), Positives = 112/257 (43%), Gaps = 22/257 (8%)
Query: 12 KIRCVLLGEVVDRLMLHLCSNWTKRPIL-LLQFVKVRSFADQMIIQMVPHSSQLHINLEA 70
++ C L +R+ L ++ P++ L+Q K++ + M +
Sbjct: 169 RVHCTLWANYAERMNSFLAAHDPSSPVVVLIQQCKLKKYQGIM---------------DV 213
Query: 71 VSIFTRRLFSQSIQINEHVGFIPYQKLEMNMKDEMMNLYPKKTLTQLLVEEQTGVCVTYG 130
+ F ++ +Q+++ + + +++ D+M+ + T+ L+ + +
Sbjct: 214 SNEFKSKIDGGDVQVSQSISHNTTSTV-VSLVDDMLQT-KRMTIEDLIEATEQCQGIVLA 271
Query: 131 GIVGLIRDEPWTYPSCI-CHDELIVRTGVYECVRCDRFFYQMIRRYRLKIEVFDGYQSAV 189
I G+ + W Y +C C + C +C+ + R++L ++V D S
Sbjct: 272 TICGIESEYSWYYQACTKCVGRVRTVASRLYCGKCNTG-RNAVARFKLHVQVIDNTGSTS 330
Query: 190 FVLSDREVKEVMKKSFEKFVIPFEAQLDVEFPLEVEENVIGKKMLFKVERIAGLTYNGTP 249
F+L DR V + + + + +I + ++P ++ ++ +GK+MLFKVE G +
Sbjct: 331 FILFDRNVSKYVNGTIQD-MIDAQPNNSSDYPSDL-DSFVGKQMLFKVEVSDGNLLHNWR 388
Query: 250 CYEVIRVCSDLELIEMF 266
Y V R ++ ++I F
Sbjct: 389 NYVVKRTTAEEDVINQF 405