Miyakogusa Predicted Gene

Lj2g3v2017750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017750.1 tr|G7IU95|G7IU95_MEDTR Zinc finger protein
CONSTANS-like protein OS=Medicago truncatula
GN=MTR_2g096,42.57,6e-19,CCT,CCT domain; seg,NULL,CUFF.38451.1
         (283 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g010120.1 | CCT motif protein | HC | chr5:2635582-2637479 ...   250   1e-66
Medtr8g098725.1 | CCT motif protein | HC | chr8:41223454-4122117...   217   1e-56
Medtr8g098725.2 | CCT motif protein | HC | chr8:41224283-4122117...   211   8e-55
Medtr2g096080.1 | CCT motif protein | HC | chr2:41011109-4101337...   105   4e-23
Medtr2g068730.1 | CCT motif protein | HC | chr2:28534921-2853693...   103   2e-22
Medtr1g073350.1 | CCT motif protein | HC | chr1:32553600-3255596...    94   1e-19
Medtr4g061910.1 | CCT motif protein | HC | chr4:22940539-2294394...    94   2e-19
Medtr4g061823.1 | CCT motif protein | HC | chr4:22888875-2289227...    94   2e-19
Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-1692325...    90   3e-18
Medtr1g008220.1 | CCT motif protein | HC | chr1:804510-809146 | ...    83   4e-16
Medtr3g091340.1 | CCT motif protein | HC | chr3:41550030-4154691...    81   9e-16
Medtr3g091340.3 | CCT motif protein | HC | chr3:41548948-4154691...    81   1e-15
Medtr3g091340.2 | CCT motif protein | HC | chr3:41549218-4154691...    81   1e-15
Medtr1g013450.1 | zinc finger constans-like protein | HC | chr1:...    56   4e-08
Medtr4g128930.1 | zinc finger constans-like protein | HC | chr4:...    55   6e-08
Medtr7g018170.1 | zinc finger constans-like protein | HC | chr7:...    55   8e-08
Medtr3g105710.1 | zinc finger constans-like protein | HC | chr3:...    54   2e-07
Medtr7g108150.1 | zinc finger constans-like protein | HC | chr7:...    49   7e-06

>Medtr5g010120.1 | CCT motif protein | HC | chr5:2635582-2637479 |
           20130731
          Length = 251

 Score =  250 bits (638), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/278 (51%), Positives = 172/278 (61%), Gaps = 42/278 (15%)

Query: 3   SDLYTFDVPFRTHSSLDMVSSDGITDLLFSDSYQXXXXXXXXXXXXXXXXTHLENQSLYQ 62
           SD+YT D+ F THSS ++VS D      + ++ Q                          
Sbjct: 5   SDIYTIDISFHTHSSSNIVSYDPNYPFNYIETVQEDLNNSLDSFSSSFFSFS-------- 56

Query: 63  PNPVQDGPNINNNFGNYSVLEGSRVKSEECQMGVDFPYNSHFLPHSFSGADESASKFMQR 122
            +P  D        GN+S L+GS +K++ECQMGVD+ Y                 K MQR
Sbjct: 57  -SPTSD------QLGNFSALDGSSLKTKECQMGVDYTY---------------YQKLMQR 94

Query: 123 SYSCNSFDWKL------HGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKAT 176
           SY+CN+F  KL      + +  +DSP F  H LSSPENSFF GQIRRACSAGDLQN+ AT
Sbjct: 95  SYNCNNFHEKLDFPSEAYHNTHMDSPIFQCHELSSPENSFFNGQIRRACSAGDLQNM-AT 153

Query: 177 HTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRI 236
              QTD     E NFKVGRYS EER+EKIS+YRAKRS+RKFNK IKYACRKTLADNRTRI
Sbjct: 154 PGSQTD-----EVNFKVGRYSLEERKEKISRYRAKRSRRKFNKIIKYACRKTLADNRTRI 208

Query: 237 RGRFARNDETSEVPRATCSTTAEEHEDNFWVEFVESLN 274
           RGRFARND+T+E+P+  CS T + HED FWV+F+E LN
Sbjct: 209 RGRFARNDKTNEIPKPVCSETEQYHEDVFWVDFIEGLN 246


>Medtr8g098725.1 | CCT motif protein | HC | chr8:41223454-41221171 |
           20130731
          Length = 324

 Score =  217 bits (552), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 116/202 (57%), Positives = 143/202 (70%), Gaps = 19/202 (9%)

Query: 79  YSVLEGSRVKSEECQMGVDFPYNS------HFLPHSFSGADESASKFMQRSYSCNSFDWK 132
           +S  + S+VK+EE Q+ +D+   +       FLPHS+SG DE+ SK+MQRS+S NSF+ K
Sbjct: 97  FSAFDFSQVKNEESQISIDYYNYNTNTNNNQFLPHSYSG-DENVSKYMQRSFSSNSFEKK 155

Query: 133 ------LHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQTDSPLL 186
                  H D  +DS  F RH LSSPENS     +RR CS GDLQN+K  +   T+  L 
Sbjct: 156 PSFLFQTHHDNLVDSSKFQRHDLSSPENS-----LRRVCSTGDLQNMKENNMSPTEGNLQ 210

Query: 187 EESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDET 246
           EE NFKVGRYSAEER+EKISKYRAKR+QR FNKTIKYACRKTLADNR R+RGRFARNDE 
Sbjct: 211 EEQNFKVGRYSAEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRVRGRFARNDEP 270

Query: 247 SEVPRATCSTTAEEHEDNFWVE 268
           +E+P+A C    +E E +FW+E
Sbjct: 271 TEIPKAPC-LIRDEDEVDFWME 291


>Medtr8g098725.2 | CCT motif protein | HC | chr8:41224283-41221171 |
           20130731
          Length = 328

 Score =  211 bits (536), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/206 (56%), Positives = 143/206 (69%), Gaps = 23/206 (11%)

Query: 79  YSVLEGSRVKSEECQMGVDFPYNS------HFLPHSFSGADESASKFMQRSYSCNSFDWK 132
           +S  + S+VK+EE Q+ +D+   +       FLPHS+SG DE+ SK+MQRS+S NSF+ K
Sbjct: 97  FSAFDFSQVKNEESQISIDYYNYNTNTNNNQFLPHSYSG-DENVSKYMQRSFSSNSFEKK 155

Query: 133 ------LHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQ----NVKATHTPQTD 182
                  H D  +DS  F RH LSSPENS     +RR CS GDLQ    N+K  +   T+
Sbjct: 156 PSFLFQTHHDNLVDSSKFQRHDLSSPENS-----LRRVCSTGDLQSLKQNMKENNMSPTE 210

Query: 183 SPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
             L EE NFKVGRYSAEER+EKISKYRAKR+QR FNKTIKYACRKTLADNR R+RGRFAR
Sbjct: 211 GNLQEEQNFKVGRYSAEERKEKISKYRAKRTQRNFNKTIKYACRKTLADNRPRVRGRFAR 270

Query: 243 NDETSEVPRATCSTTAEEHEDNFWVE 268
           NDE +E+P+A C    +E E +FW+E
Sbjct: 271 NDEPTEIPKAPC-LIRDEDEVDFWME 295


>Medtr2g096080.1 | CCT motif protein | HC | chr2:41011109-41013371 |
           20130731
          Length = 251

 Score =  105 bits (263), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 64/148 (43%), Positives = 79/148 (53%), Gaps = 29/148 (19%)

Query: 119 FMQRSYSCNSFDWKLHGDAFIDSPNFGRHALSSPENSFFT-------GQIRRACSAGDLQ 171
            MQRS S +S  +           N G H    P ++FF          +R+ CS GDLQ
Sbjct: 70  LMQRSISSHSLQY-----------NNGTHHY--PLSAFFADLLDSDDAPVRKVCSTGDLQ 116

Query: 172 NVKAT---HTPQTDSPLLEESNF------KVGRYSAEERREKISKYRAKRSQRKFNKTIK 222
            +      H    DSPL  ES+       +V  YS EE++ +I +YR KR+QR FNK IK
Sbjct: 117 RINGMQHNHHHHVDSPLSSESSMIIEGMSRVCPYSPEEKKVRIERYRIKRNQRNFNKKIK 176

Query: 223 YACRKTLADNRTRIRGRFARNDETSEVP 250
           Y CRKTLAD R RIRGRFARNDE  + P
Sbjct: 177 YVCRKTLADRRPRIRGRFARNDEIDKKP 204


>Medtr2g068730.1 | CCT motif protein | HC | chr2:28534921-28536937 |
           20130731
          Length = 266

 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 54/97 (55%), Positives = 65/97 (67%), Gaps = 7/97 (7%)

Query: 186 LEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDE 245
           +EE N KVGRYS EER+E+I +Y  KR+QR FNKTIKYACRKTLAD R R+RGRFARN+E
Sbjct: 148 VEEPNIKVGRYSEEERKERILRYLKKRNQRNFNKTIKYACRKTLADRRVRVRGRFARNNE 207

Query: 246 TSEVPRATCSTTAEEHEDNFWVEFVESLNFYGVPQFQ 282
           T E      +   E H D+       + +FYG   FQ
Sbjct: 208 TCEEDHMA-TKKLENHHDHI------NEDFYGADSFQ 237


>Medtr1g073350.1 | CCT motif protein | HC | chr1:32553600-32555963 |
           20130731
          Length = 414

 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 2/77 (2%)

Query: 175 ATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRT 234
           AT TP+  +  LE+S FKVG+ S E+R+EKI +Y  KR++R F+K IKYACRKTLAD+R 
Sbjct: 292 ATLTPEISN--LEDSTFKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRP 349

Query: 235 RIRGRFARNDETSEVPR 251
           R+RGRFA+ND+  +  R
Sbjct: 350 RVRGRFAKNDDFGDTNR 366


>Medtr4g061910.1 | CCT motif protein | HC | chr4:22940539-22943940 |
           20130731
          Length = 242

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 10/102 (9%)

Query: 159 GQIRRACSAGDL-QNVKAT--HTPQTDSPLLEESNFKV-------GRYSAEERREKISKY 208
           G +RR  S GDL Q V     +  Q+DSPL  ESN  +         YS EE++ +I +Y
Sbjct: 93  GPVRRVYSTGDLDQRVGGMQQYYHQSDSPLSTESNMIIEEMSRPASPYSPEEKKVRIERY 152

Query: 209 RAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSEVP 250
           R+K++QR +NK IKY CRKTLAD+R RIRGRFA+NDE    P
Sbjct: 153 RSKKNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDEIVRNP 194


>Medtr4g061823.1 | CCT motif protein | HC | chr4:22888875-22892276 |
           20130731
          Length = 242

 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 10/102 (9%)

Query: 159 GQIRRACSAGDL-QNVKAT--HTPQTDSPLLEESNFKV-------GRYSAEERREKISKY 208
           G +RR  S GDL Q V     +  Q+DSPL  ESN  +         YS EE++ +I +Y
Sbjct: 93  GPVRRVYSTGDLDQRVGGMQQYYHQSDSPLSTESNMIIEEMSRPASPYSPEEKKVRIERY 152

Query: 209 RAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSEVP 250
           R+K++QR +NK IKY CRKTLAD+R RIRGRFA+NDE    P
Sbjct: 153 RSKKNQRNYNKKIKYVCRKTLADSRPRIRGRFAKNDEIVRNP 194


>Medtr1g044785.1 | CCT motif protein | HC | chr1:16921077-16923253 |
           20130731
          Length = 230

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 6/97 (6%)

Query: 175 ATHTPQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRT 234
           AT  P+     LE+S+ KVG+ S E+R+EKI +Y  KR++R F+K IKYACRKTLAD+R 
Sbjct: 110 ATLAPEISH--LEDSSLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRP 167

Query: 235 RIRGRFARNDETSEVPRATCSTTAEEHEDNFWVEFVE 271
           R+RGRFA+ND+  E  R   S     HED+  +   E
Sbjct: 168 RVRGRFAKNDDFGENHRPGRSN----HEDDDEIAVKE 200


>Medtr1g008220.1 | CCT motif protein | HC | chr1:804510-809146 |
           20130731
          Length = 282

 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 16/127 (12%)

Query: 123 SYSCNSFDWKLHGDA----FIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHT 178
           S + +S DW +HG A    F+D P    +A+           +RRA S GD++ +   + 
Sbjct: 162 SGNLSSMDW-MHGPAMKPAFLDFPGIDFNAVYG---------MRRAFSEGDIKTLGNGNM 211

Query: 179 PQTDSPLLEESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRG 238
               S L  E  F +   ++E+R+EK+S+YR K+++R F + IKYACRK LAD++ RIRG
Sbjct: 212 SVGQSTL--ERPFLLSNCTSEQRQEKLSRYRNKKTRRNFGRKIKYACRKALADSQPRIRG 269

Query: 239 RFARNDE 245
           RFA+ +E
Sbjct: 270 RFAKTEE 276


>Medtr3g091340.1 | CCT motif protein | HC | chr3:41550030-41546916 |
           20130731
          Length = 281

 Score = 81.3 bits (199), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)

Query: 129 FDWKLHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQTDSPLLEE 188
            DW +HG A +     G   +S  +     G +RR+ S GD++     +     SP+  E
Sbjct: 165 MDW-MHGSAAMKPAFLG---ISGIDFDAVYG-MRRSFSEGDIKTFGNANMNVVQSPV--E 217

Query: 189 SNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
             F     S+EER +K+S+YR K+++R F + IKYACRK LAD++ R+RGRFA+N+ET +
Sbjct: 218 RPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQ 277

Query: 249 VPR 251
             +
Sbjct: 278 AKK 280


>Medtr3g091340.3 | CCT motif protein | HC | chr3:41548948-41546916 |
           20130731
          Length = 252

 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)

Query: 129 FDWKLHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQTDSPLLEE 188
            DW +HG A +     G   +S  +     G +RR+ S GD++     +     SP+  E
Sbjct: 136 MDW-MHGSAAMKPAFLG---ISGIDFDAVYG-MRRSFSEGDIKTFGNANMNVVQSPV--E 188

Query: 189 SNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
             F     S+EER +K+S+YR K+++R F + IKYACRK LAD++ R+RGRFA+N+ET +
Sbjct: 189 RPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQ 248

Query: 249 VPR 251
             +
Sbjct: 249 AKK 251


>Medtr3g091340.2 | CCT motif protein | HC | chr3:41549218-41546916 |
           20130731
          Length = 245

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 72/123 (58%), Gaps = 7/123 (5%)

Query: 129 FDWKLHGDAFIDSPNFGRHALSSPENSFFTGQIRRACSAGDLQNVKATHTPQTDSPLLEE 188
            DW +HG A +     G   +S  +     G +RR+ S GD++     +     SP+  E
Sbjct: 129 MDW-MHGSAAMKPAFLG---ISGIDFDAVYG-MRRSFSEGDIKTFGNANMNVVQSPV--E 181

Query: 189 SNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDETSE 248
             F     S+EER +K+S+YR K+++R F + IKYACRK LAD++ R+RGRFA+N+ET +
Sbjct: 182 RPFFTSNCSSEERLQKLSRYRNKKTKRNFGRKIKYACRKALADSQPRVRGRFAKNEETDQ 241

Query: 249 VPR 251
             +
Sbjct: 242 AKK 244


>Medtr1g013450.1 | zinc finger constans-like protein | HC |
           chr1:3420903-3419850 | 20130731
          Length = 316

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 24/46 (52%), Positives = 33/46 (71%)

Query: 197 SAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
           +A ER  ++ +YR KR  R+F KTI+YA RK  A+ R RI+GRFA+
Sbjct: 251 TAVEREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAK 296


>Medtr4g128930.1 | zinc finger constans-like protein | HC |
           chr4:53656301-53658369 | 20130731
          Length = 375

 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)

Query: 200 ERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARNDET-SEVPR 251
           +R  ++ +YR KR  RKF KTI+YA RK  A+ R RI+GRFA+  E  S+V R
Sbjct: 297 DREARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEIDSDVDR 349


>Medtr7g018170.1 | zinc finger constans-like protein | HC |
           chr7:5837191-5833561 | 20130731
          Length = 396

 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)

Query: 196 YSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFA-RNDETSEV 249
           +S  +R  ++ +YR K+  RKF KTI+YA RK  A+ R RI+GRFA R D  +EV
Sbjct: 322 FSPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEV 376


>Medtr3g105710.1 | zinc finger constans-like protein | HC |
           chr3:48758302-48759914 | 20130731
          Length = 290

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 1/56 (1%)

Query: 187 EESNFKVGRYSAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFAR 242
           E SN   G   A +R  ++ +YR KR  R+F KTI+YA RK  A+ R RI+GRFA+
Sbjct: 219 EISNCGYGTV-AVDREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAK 273


>Medtr7g108150.1 | zinc finger constans-like protein | HC |
           chr7:43981894-43978299 | 20130731
          Length = 372

 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 35/48 (72%)

Query: 197 SAEERREKISKYRAKRSQRKFNKTIKYACRKTLADNRTRIRGRFARND 244
           +++ER   + +Y+ K+  R+++K I+Y  RK  A++RTR++GRFA+ D
Sbjct: 324 ASQERDSALLRYKQKKKTRRYDKHIRYESRKVRAESRTRVKGRFAKID 371