Miyakogusa Predicted Gene

Lj2g3v2017500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017500.1 tr|Q6H7R8|Q6H7R8_ORYSJ Os02g0642200 protein
OS=Oryza sativa subsp. japonica GN=OJ1112_G03.12 PE=2
SV,60.87,5e-19,Remorin_C,Remorin, C-terminal; FAMILY NOT NAMED,NULL;
coiled-coil,NULL; seg,NULL,CUFF.38427.1
         (182 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g010590.1 | carboxy-terminal region remorin | HC | chr5:28...   186   1e-47
Medtr8g097320.1 | carboxy-terminal region remorin | HC | chr8:40...   166   1e-41
Medtr8g097320.2 | carboxy-terminal region remorin | HC | chr8:40...   160   5e-40
Medtr1g100647.1 | carboxy-terminal region remorin | HC | chr1:45...   150   8e-37
Medtr8g031370.1 | carboxy-terminal region remorin | HC | chr8:11...   134   6e-32
Medtr7g076730.1 | carboxy-terminal region remorin | HC | chr7:28...   132   2e-31
Medtr5g010590.2 | carboxy-terminal region remorin | HC | chr5:28...   104   5e-23
Medtr8g079482.1 | carboxy-terminal region remorin | HC | chr8:34...    59   3e-09
Medtr8g079482.2 | carboxy-terminal region remorin | HC | chr8:34...    59   3e-09
Medtr7g091990.1 | carboxy-terminal region remorin | HC | chr7:36...    59   3e-09
Medtr1g019280.1 | carboxy-terminal region remorin | HC | chr1:57...    56   2e-08
Medtr1g052560.1 | carboxy-terminal region remorin | HC | chr1:21...    53   1e-07
Medtr1g019280.2 | carboxy-terminal region remorin | HC | chr1:57...    51   5e-07
Medtr8g080180.2 | carboxy-terminal region remorin | HC | chr8:34...    47   9e-06
Medtr8g080180.1 | carboxy-terminal region remorin | HC | chr8:34...    47   9e-06

>Medtr5g010590.1 | carboxy-terminal region remorin | HC |
           chr5:2869609-2871761 | 20130731
          Length = 209

 Score =  186 bits (472), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/197 (58%), Positives = 136/197 (69%), Gaps = 15/197 (7%)

Query: 1   MGE-EDSNLNKVESQT--EFVDSXXXXXXXXXXXXXXXXXAVT-QEEPHKEVPSPIV-QN 55
           MGE E S++NK ES      +D                   ++  +EP+++  S +  Q 
Sbjct: 1   MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTISISQEPNQQAISTLDDQK 60

Query: 56  VADDDA-KKVTGDSVD---------RDAALARVVTEKRLALIKAWEESEKTKAENRAYKK 105
           VADD A  K TGD  D         RDA LA++V EKRLALIKAWEESEKTKAENRAYKK
Sbjct: 61  VADDHADNKETGDHDDKKDAKDSTDRDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKK 120

Query: 106 QSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKK 165
           QS+VGLWEES+K+SIEA+LKK EENLERKK EY  KMKN++AEIHQ AEEKRA VEA K+
Sbjct: 121 QSSVGLWEESKKSSIEAQLKKFEENLERKKVEYVSKMKNELAEIHQYAEEKRAIVEAQKR 180

Query: 166 EEFLEVEETAAKFRSRG 182
           EE LE+EETAAKFRSRG
Sbjct: 181 EECLELEETAAKFRSRG 197


>Medtr8g097320.1 | carboxy-terminal region remorin | HC |
           chr8:40772400-40769635 | 20130731
          Length = 205

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/118 (72%), Positives = 100/118 (84%)

Query: 65  TGDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAEL 124
           T DSVDRDA LARV ++KRLALIKAWEE+EKTK ENRAYK QSAV LWE+ +KASIEA+ 
Sbjct: 71  TKDSVDRDAVLARVESQKRLALIKAWEENEKTKVENRAYKMQSAVDLWEDDKKASIEAKF 130

Query: 125 KKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           K IE  L+RKK+EY E M+NKI EIH++AEEK+A +EA K EE L+VEETAAKFR+RG
Sbjct: 131 KGIEVKLDRKKSEYVEVMQNKIGEIHKSAEEKKAMIEAQKGEEILKVEETAAKFRTRG 188


>Medtr8g097320.2 | carboxy-terminal region remorin | HC |
           chr8:40772237-40769635 | 20130731
          Length = 208

 Score =  160 bits (406), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 85/121 (70%), Positives = 100/121 (82%), Gaps = 3/121 (2%)

Query: 65  TGDSVDR---DAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIE 121
           T DSVDR   DA LARV ++KRLALIKAWEE+EKTK ENRAYK QSAV LWE+ +KASIE
Sbjct: 71  TKDSVDRVPLDAVLARVESQKRLALIKAWEENEKTKVENRAYKMQSAVDLWEDDKKASIE 130

Query: 122 AELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSR 181
           A+ K IE  L+RKK+EY E M+NKI EIH++AEEK+A +EA K EE L+VEETAAKFR+R
Sbjct: 131 AKFKGIEVKLDRKKSEYVEVMQNKIGEIHKSAEEKKAMIEAQKGEEILKVEETAAKFRTR 190

Query: 182 G 182
           G
Sbjct: 191 G 191


>Medtr1g100647.1 | carboxy-terminal region remorin | HC |
           chr1:45590830-45593341 | 20130731
          Length = 209

 Score =  150 bits (378), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 75/117 (64%), Positives = 96/117 (82%)

Query: 66  GDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELK 125
           G S+DRDA L RV TEKRL+LIKAWEESEK+KAEN+A ++ S +  WE S+KA+ EAEL+
Sbjct: 83  GGSIDRDAVLTRVATEKRLSLIKAWEESEKSKAENKAQRRLSTITAWENSKKAAKEAELR 142

Query: 126 KIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           K+EE LE+KK EYAEK+KNKIA +H+AAEEK+A +EA K E+ L+ EE AAK+R+ G
Sbjct: 143 KLEEQLEKKKGEYAEKLKNKIAALHKAAEEKKAMIEAKKGEDLLKAEEIAAKYRATG 199


>Medtr8g031370.1 | carboxy-terminal region remorin | HC |
           chr8:11753967-11749805 | 20130731
          Length = 200

 Score =  134 bits (336), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/135 (54%), Positives = 96/135 (71%), Gaps = 11/135 (8%)

Query: 48  VPSPIVQNVADDDAKKVTGDSVDRDAALARVVTEKRLALIKAWEESEKTKAENRAYKKQS 107
           +P P+ +N            S+DRD ALA +  EKRL+ +KAWE+SEKTKAEN+A K+ S
Sbjct: 67  IPEPVKKNA-----------SLDRDIALAEIGKEKRLSNVKAWEDSEKTKAENKAQKQLS 115

Query: 108 AVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEE 167
            V  WE S+KA++EA+L+KIEE LE+KKAEY EK+KNK+A +H+ AEEKRA VEA + E 
Sbjct: 116 TVAAWENSKKAALEAQLRKIEEQLEKKKAEYGEKIKNKVAMVHKQAEEKRAIVEAQRAEA 175

Query: 168 FLEVEETAAKFRSRG 182
            L+ EE AAK  + G
Sbjct: 176 ILKAEEIAAKHNATG 190


>Medtr7g076730.1 | carboxy-terminal region remorin | HC |
           chr7:28942331-28943740 | 20130731
          Length = 133

 Score =  132 bits (332), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 88/111 (79%)

Query: 72  DAALARVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENL 131
           D  LA V  EK+L  +KAWEESEKTKA+N+A+K  S++  WE+S+KA++EAELKKIEE L
Sbjct: 13  DIVLAEVTKEKKLCYVKAWEESEKTKADNKAHKHISSIAAWEDSKKAALEAELKKIEEQL 72

Query: 132 ERKKAEYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           ERKKA Y E M+NKIA +H+ AEEKRA +EA + EE L+V+E AAK+R+ G
Sbjct: 73  ERKKARYGEIMRNKIALVHKEAEEKRAMIEAKRGEEVLKVQEMAAKYRATG 123


>Medtr5g010590.2 | carboxy-terminal region remorin | HC |
           chr5:2869609-2871940 | 20130731
          Length = 194

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/143 (51%), Positives = 89/143 (62%), Gaps = 15/143 (10%)

Query: 1   MGE-EDSNLNKVESQT--EFVDSXXXXXXXXXXXXXXXXXAVT-QEEPHKEVPSPIV-QN 55
           MGE E S++NK ES      +D                   ++  +EP+++  S +  Q 
Sbjct: 1   MGESEGSSINKTESPQLQSLLDPVPEELSPVVEKDSETLSTISISQEPNQQAISTLDDQK 60

Query: 56  VADDDA-KKVTGDSVD---------RDAALARVVTEKRLALIKAWEESEKTKAENRAYKK 105
           VADD A  K TGD  D         RDA LA++V EKRLALIKAWEESEKTKAENRAYKK
Sbjct: 61  VADDHADNKETGDHDDKKDAKDSTDRDAGLAKIVAEKRLALIKAWEESEKTKAENRAYKK 120

Query: 106 QSAVGLWEESRKASIEAELKKIE 128
           QS+VGLWEES+K+SIEA+LKK E
Sbjct: 121 QSSVGLWEESKKSSIEAQLKKFE 143


>Medtr8g079482.1 | carboxy-terminal region remorin | HC |
           chr8:34063857-34067628 | 20130731
          Length = 528

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 77  RVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKA 136
           R+  EKR AL   WEE+EK+K   R  +++  +  WE  +KA +EAE+++ E  +E+ +A
Sbjct: 412 RIEFEKRAAL---WEEAEKSKHTARLKREEIQIQAWESQQKAKLEAEMRRTEAKVEQMRA 468

Query: 137 EYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAK 177
           +   KM  KIA   Q ++EKRA  EA K     E E TAA+
Sbjct: 469 QTHAKMVKKIAMARQRSDEKRAQAEARKNR---EAERTAAQ 506


>Medtr8g079482.2 | carboxy-terminal region remorin | HC |
           chr8:34063857-34067628 | 20130731
          Length = 438

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 6/101 (5%)

Query: 77  RVVTEKRLALIKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKA 136
           R+  EKR AL   WEE+EK+K   R  +++  +  WE  +KA +EAE+++ E  +E+ +A
Sbjct: 322 RIEFEKRAAL---WEEAEKSKHTARLKREEIQIQAWESQQKAKLEAEMRRTEAKVEQMRA 378

Query: 137 EYAEKMKNKIAEIHQAAEEKRATVEANKKEEFLEVEETAAK 177
           +   KM  KIA   Q ++EKRA  EA K     E E TAA+
Sbjct: 379 QTHAKMVKKIAMARQRSDEKRAQAEARKNR---EAERTAAQ 416


>Medtr7g091990.1 | carboxy-terminal region remorin | HC |
           chr7:36403616-36400654 | 20130731
          Length = 279

 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 1/145 (0%)

Query: 39  VTQEEPHKEVPSPIVQ-NVADDDAKKVTGDSVDRDAALARVVTEKRLALIKAWEESEKTK 97
           V    P   +PSP  + N+A   ++       +   ++ RV  E+  A I AW+ ++  K
Sbjct: 126 VVDNSPFDPIPSPTSRRNMASGSSRASGQGGSEEHVSVDRVKKEEVDAKISAWQNAKVAK 185

Query: 98  AENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAEIHQAAEEKR 157
             NR  +  + +  WE  +     + +KK+E  LE K+A   EK +NKIA+  + AEE++
Sbjct: 186 INNRFKRDDAVINGWESEQVQKATSWMKKVERKLEEKRARALEKTQNKIAKARRKAEERK 245

Query: 158 ATVEANKKEEFLEVEETAAKFRSRG 182
           A+ EA +  +   V E A   R+ G
Sbjct: 246 ASAEAKRGTKVARVLEIANLMRAVG 270


>Medtr1g019280.1 | carboxy-terminal region remorin | HC |
           chr1:5782200-5777571 | 20130731
          Length = 620

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 54/94 (57%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           +WE SE++K  ++A ++++ +  WE  +KA  EA ++K+E  LE+K+A   +K+ NK+  
Sbjct: 513 SWEISERSKTVSKAKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRASSMDKIMNKLKF 572

Query: 149 IHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
             + A+E R++V  ++  +          FR  G
Sbjct: 573 AQKKAQEMRSSVSVDQAHQVARTSHKVMSFRRAG 606


>Medtr1g052560.1 | carboxy-terminal region remorin | HC |
           chr1:21429641-21426963 | 20130731
          Length = 273

 Score = 53.1 bits (126), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 53/96 (55%)

Query: 87  IKAWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKI 146
           I AW+ ++  K  NR  ++ + +  WE  +     + + K+E  LE K+A+  EKM+N +
Sbjct: 169 IAAWQNAKVAKVNNRFKREDAVINGWENEQVQKANSWMMKVERKLEEKRAKALEKMQNDV 228

Query: 147 AEIHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
           A+ H+ A+EKRA+ EA +  +   V E A   R  G
Sbjct: 229 AKAHRKAQEKRASAEAKRGTKISRVLEIANLMRVVG 264


>Medtr1g019280.2 | carboxy-terminal region remorin | HC |
           chr1:5781751-5777571 | 20130731
          Length = 558

 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 54/94 (57%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           +WE SE++K  ++A ++++ +  WE  +KA  EA ++K+E  LE+K+A   +K+ NK+  
Sbjct: 451 SWEISERSKTVSKAKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRASSMDKIMNKLKF 510

Query: 149 IHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
             + A+E R++V  ++  +          FR  G
Sbjct: 511 AQKKAQEMRSSVSVDQAHQVARTSHKVMSFRRAG 544


>Medtr8g080180.2 | carboxy-terminal region remorin | HC |
           chr8:34442403-34445750 | 20130731
          Length = 361

 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           AW+E+E+ K   R  +++  +  WE  +    E E+KK+E   ER KA   EK+ NK+A 
Sbjct: 251 AWDEAERAKYMARFKREEMKIQAWENHQIRKAEMEMKKMEVKAERMKAMAQEKLTNKLAA 310

Query: 149 IHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
             + AEEKRA  +    +  L   E     R  G
Sbjct: 311 TRRIAEEKRANAQVKLNDNALRTTERVDYIRRTG 344


>Medtr8g080180.1 | carboxy-terminal region remorin | HC |
           chr8:34442437-34445750 | 20130731
          Length = 361

 Score = 47.0 bits (110), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 47/94 (50%)

Query: 89  AWEESEKTKAENRAYKKQSAVGLWEESRKASIEAELKKIEENLERKKAEYAEKMKNKIAE 148
           AW+E+E+ K   R  +++  +  WE  +    E E+KK+E   ER KA   EK+ NK+A 
Sbjct: 251 AWDEAERAKYMARFKREEMKIQAWENHQIRKAEMEMKKMEVKAERMKAMAQEKLTNKLAA 310

Query: 149 IHQAAEEKRATVEANKKEEFLEVEETAAKFRSRG 182
             + AEEKRA  +    +  L   E     R  G
Sbjct: 311 TRRIAEEKRANAQVKLNDNALRTTERVDYIRRTG 344