Miyakogusa Predicted Gene

Lj2g3v2017360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2017360.1 Non Characterized Hit- tr|I1NGQ8|I1NGQ8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,50,4e-19,seg,NULL;
P-loop containing nucleoside triphosphate hydrolases,NULL; IQ,IQ
motif, EF-hand binding si,CUFF.38416.1
         (218 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102840.1 | calmodulin-binding protein | HC | chr4:4263225...   135   3e-32
Medtr1g101330.1 | calmodulin-binding protein | HC | chr1:4577334...    51   7e-07

>Medtr4g102840.1 | calmodulin-binding protein | HC |
           chr4:42632259-42635704 | 20130731
          Length = 427

 Score =  135 bits (340), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/220 (42%), Positives = 109/220 (49%), Gaps = 16/220 (7%)

Query: 1   MGKASKWFRGLLGMR-TPDXXXXXXXXXXXEKRRWSLVKSYREKDNHP--VTAPVQGGNK 57
           MGKAS+WFRGLLG++ T             EKRRWS VKSYRE+  H   VT P +    
Sbjct: 1   MGKASRWFRGLLGLKKTEHGSSSSDQKPPKEKRRWSFVKSYREEQQHSSHVTFPTE---- 56

Query: 58  HVXXXXXXXXXXXXXXXXXRLTGTAASGVTPREEWAAVKIQAAFXXXXXXXXXXXXXXXX 117
           HV                 R   ++   V  RE+WAAVKIQAAF                
Sbjct: 57  HVQNNRQAIAVAAAEVV--RFNYSSNGIVRIREQWAAVKIQAAFRGSLARKALRALKGLV 114

Query: 118 XXQALVRGHIERKRTKEWVQRVXXXXXXXXXXXXXXGQILDQASFHIAKSFTGPLHGPVT 177
             QALVRGHIERKRT EW++R+                   Q S   AKS T  L+GP T
Sbjct: 115 KLQALVRGHIERKRTAEWLKRMQSLLRAQARFNAARTM---QTSHLNAKSSTLHLYGPAT 171

Query: 178 PEKFESPISSESVKYSQSPALKRNISKSC----GRINGNQ 213
           PEK ESP+ S S+K   SP LKRN SKSC    G I+ NQ
Sbjct: 172 PEKSESPVRSRSMKSEHSPGLKRNGSKSCLSNGGNISENQ 211


>Medtr1g101330.1 | calmodulin-binding protein | HC |
           chr1:45773346-45767891 | 20130731
          Length = 441

 Score = 51.2 bits (121), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 12/140 (8%)

Query: 77  RLTGTAASGVTPR--------EEWAAVKIQAAFXXXXXXXXXXXXXXXXXXQALVRGHIE 128
           RLT +  +G + +        EE AAVKIQ+AF                  QALVRGHI 
Sbjct: 93  RLTSSGVAGSSNKTRGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIV 152

Query: 129 RKRTKEWVQRVXXXXXXXXXXXXXXGQILDQASFHIAKSFTGPLHGPVTPEKFESPISSE 188
           RK+T + ++R+                 L   + H  KS     H PV PE++E P    
Sbjct: 153 RKKTADMLRRMQTLVRLQTKARASRAH-LSSDNLHSFKSSLS--HYPV-PEEYEQPHHVY 208

Query: 189 SVKYSQSPALKRNISKSCGR 208
           S K+  S  LKR  S S  R
Sbjct: 209 STKFGGSSILKRCSSNSNFR 228