Miyakogusa Predicted Gene

Lj2g3v2014190.1
Show Alignment: 

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2014190.1 Non Characterized Hit- tr|J4I9X7|J4I9X7_9APHY
Uncharacterized protein OS=Fibroporia radiculosa PE=4
,31.94,0.7,seg,NULL; PH domain-like,NULL; NUCLEOPORIN 50,NULL; no
description,Pleckstrin homology-like domain,CUFF.38418.1
         (100 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g010950.1 | RanBP1 domain protein | HC | chr5:3042243-3049...   160   4e-40
Medtr5g010950.2 | RanBP1 domain protein | HC | chr5:3042380-3049...   152   9e-38

>Medtr5g010950.1 | RanBP1 domain protein | HC | chr5:3042243-3049094
           | 20130731
          Length = 356

 Score =  160 bits (404), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 81/100 (81%), Positives = 84/100 (84%), Gaps = 2/100 (2%)

Query: 1   MGQLSIKCKEGVSKATRESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSVVAIFHTXXX 60
           MG LSIKCKEGV+KAT+ESKPTIVVRNEVGKILLNALLYPGIKTN QKNS+VAIFHT   
Sbjct: 259 MGNLSIKCKEGVAKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHT--A 316

Query: 61  XXXXXXXXXXVVARTFLIRMKTEDDRNKLASTIQEYAPTS 100
                     VVARTFLIRMKTEDDRNKLASTIQEYAP S
Sbjct: 317 GNADGGGDDIVVARTFLIRMKTEDDRNKLASTIQEYAPAS 356


>Medtr5g010950.2 | RanBP1 domain protein | HC | chr5:3042380-3049094
           | 20130731
          Length = 345

 Score =  152 bits (383), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 81/100 (81%), Positives = 84/100 (84%), Gaps = 2/100 (2%)

Query: 1   MGQLSIKCKEGVSKATRESKPTIVVRNEVGKILLNALLYPGIKTNLQKNSVVAIFHTXXX 60
           MG LSIKCKEGV+KAT+ESKPTIVVRNEVGKILLNALLYPGIKTN QKNS+VAIFHT   
Sbjct: 248 MGNLSIKCKEGVAKATKESKPTIVVRNEVGKILLNALLYPGIKTNPQKNSLVAIFHT--A 305

Query: 61  XXXXXXXXXXVVARTFLIRMKTEDDRNKLASTIQEYAPTS 100
                     VVARTFLIRMKTEDDRNKLASTIQEYAP S
Sbjct: 306 GNADGGGDDIVVARTFLIRMKTEDDRNKLASTIQEYAPAS 345