Miyakogusa Predicted Gene

Lj2g3v2003110.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2003110.1 Non Characterized Hit- tr|F6HUI7|F6HUI7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,86.71,0,CHLOROPLAST STEM-LOOP-BINDING PROTEIN,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATASE,NULL; RmlD_sub_bind,,CUFF.38432.1
         (301 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g102550.1 | 3,5-epimerase/4-reductase | HC | chr4:42518893...   526   e-150
Medtr2g073240.1 | rhamnose biosynthetic-like enzyme | HC | chr2:...   509   e-144
Medtr0034s0060.1 | rhamnose biosynthetic-like enzyme | HC | scaf...   504   e-143
Medtr1g009600.1 | rhamnose biosynthetic-like enzyme | HC | chr1:...   488   e-138
Medtr3g452330.1 | rhamnose biosynthetic enzyme, putative | LC | ...   118   8e-27
Medtr4g063600.4 | UDP-glucuronic acid decarboxylase | HC | chr4:...    49   8e-06
Medtr4g063600.3 | UDP-glucuronic acid decarboxylase | HC | chr4:...    49   8e-06
Medtr4g063600.1 | UDP-glucuronic acid decarboxylase | HC | chr4:...    49   8e-06

>Medtr4g102550.1 | 3,5-epimerase/4-reductase | HC |
           chr4:42518893-42521173 | 20130731
          Length = 298

 Score =  526 bits (1356), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 252/301 (83%), Positives = 275/301 (91%), Gaps = 3/301 (0%)

Query: 1   MGSEANNGDQNQNQLKFLIYGRTGWIGGLLGKLCDQQGIPYAYGDGRLENRPSLEADIAA 60
           MG  A + D     LKFLIYGRTGWIGGLLGKLC  QGI Y YG GRLENR SLE+DIA 
Sbjct: 1   MGFPAPSSD---TPLKFLIYGRTGWIGGLLGKLCTAQGIQYEYGSGRLENRSSLESDIAE 57

Query: 61  VSPTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQRGLILINYATGCIFE 120
           + PTHVFNAAGVTGRPNVDWCE+HKVETIR NVVGTLTLADVCR+RGLI+IN+ATGCIFE
Sbjct: 58  IKPTHVFNAAGVTGRPNVDWCETHKVETIRANVVGTLTLADVCRERGLIVINFATGCIFE 117

Query: 121 YDSSHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR 180
           YD +H LGSG+GFKEEDTPNFIGSFYSKTKAMVEDLL+NY+NVCTLRVRMPISSDL+NPR
Sbjct: 118 YDVNHVLGSGIGFKEEDTPNFIGSFYSKTKAMVEDLLRNYDNVCTLRVRMPISSDLSNPR 177

Query: 181 NFITKITRYEKVVNIPNSMTILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRD 240
           NFITKITRYEKVV+IPNSMTILDEL+PISIEMAKRNLTGIWNFT+PGVVSHNEIL+MY+D
Sbjct: 178 NFITKITRYEKVVDIPNSMTILDELLPISIEMAKRNLTGIWNFTNPGVVSHNEILQMYKD 237

Query: 241 YVDPNFTYKNFTLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLIKYVFDPNHKVV 300
           Y+D +FT+KNFTLEEQAKVIVAPRSNNELDA KLKKEFP+LLSIK+SLI+ VF PN KV 
Sbjct: 238 YIDSSFTWKNFTLEEQAKVIVAPRSNNELDAGKLKKEFPELLSIKESLIENVFKPNQKVK 297

Query: 301 A 301
           A
Sbjct: 298 A 298


>Medtr2g073240.1 | rhamnose biosynthetic-like enzyme | HC |
           chr2:31018932-31021329 | 20130731
          Length = 682

 Score =  509 bits (1311), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 238/291 (81%), Positives = 262/291 (90%)

Query: 8   GDQNQNQLKFLIYGRTGWIGGLLGKLCDQQGIPYAYGDGRLENRPSLEADIAAVSPTHVF 67
           G   +  LKFLIYGRTGWIGGLLGKLC++QGIPY YG GRLE+R SL ADI  V PTH+F
Sbjct: 390 GSSQKPPLKFLIYGRTGWIGGLLGKLCEKQGIPYEYGKGRLEDRSSLVADIQNVKPTHIF 449

Query: 68  NAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYDSSHPL 127
           NAAGVTGRPNVDWCESHK ETIR NVVGTLTLADV R+  L++INYATGCIFEYD +HP 
Sbjct: 450 NAAGVTGRPNVDWCESHKTETIRVNVVGTLTLADVSREHNLLMINYATGCIFEYDEAHPE 509

Query: 128 GSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPRNFITKIT 187
           GSG+GFKEEDTPNF GSFYSKTKAMVE+LLK+Y+NVCTLRVRMPISSDL+NPRNFITKI+
Sbjct: 510 GSGIGFKEEDTPNFAGSFYSKTKAMVEELLKDYDNVCTLRVRMPISSDLSNPRNFITKIS 569

Query: 188 RYEKVVNIPNSMTILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYVDPNFT 247
           RY KVVNIPNSMT+LDEL+PISIEMAKRNL GIWNFT+PG VSHNEILEMYRDY+DPNF 
Sbjct: 570 RYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGAVSHNEILEMYRDYIDPNFK 629

Query: 248 YKNFTLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLIKYVFDPNHK 298
           + NFTLEEQAKVIVA RSNNE+DASKLK EFP+LLSIK+SLIKYVF+ N K
Sbjct: 630 WANFTLEEQAKVIVAARSNNEMDASKLKNEFPELLSIKESLIKYVFEANKK 680


>Medtr0034s0060.1 | rhamnose biosynthetic-like enzyme | HC |
           scaffold0034:17359-21865 | 20130731
          Length = 798

 Score =  504 bits (1298), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 231/296 (78%), Positives = 265/296 (89%)

Query: 3   SEANNGDQNQNQLKFLIYGRTGWIGGLLGKLCDQQGIPYAYGDGRLENRPSLEADIAAVS 62
           S  N     ++  KFL++GRTGWIGGLLGKLC++QGIPY Y  GRLE+R SL +DI  V 
Sbjct: 502 STKNTATPQKHPFKFLLFGRTGWIGGLLGKLCEKQGIPYEYAKGRLEDRASLISDIQNVK 561

Query: 63  PTHVFNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYD 122
           PTHVFNAAGVTGRPNVDWCE+HK ETIR NV GTLTLADVCR+ G+++INYATGCIFEYD
Sbjct: 562 PTHVFNAAGVTGRPNVDWCETHKTETIRANVAGTLTLADVCREHGILMINYATGCIFEYD 621

Query: 123 SSHPLGSGVGFKEEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPRNF 182
           ++HP GSG+GFKEED PNF+GSFYSKTKAMVE+LL+ Y+NVCTLRVRMPISSDL+NPRNF
Sbjct: 622 AAHPEGSGIGFKEEDKPNFMGSFYSKTKAMVEELLREYDNVCTLRVRMPISSDLSNPRNF 681

Query: 183 ITKITRYEKVVNIPNSMTILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYV 242
           ITKI+RY KVVNIPNSMT+LDEL+PISIEMAKRNL+GIWNFT+PG VSHNEILEMYRDY+
Sbjct: 682 ITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLSGIWNFTNPGAVSHNEILEMYRDYI 741

Query: 243 DPNFTYKNFTLEEQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLIKYVFDPNHK 298
           DP+F ++NFTLEEQAKVIVA RSNNE+D +KLKKEFP+LLSIK+SLIKYVF PN K
Sbjct: 742 DPSFKWQNFTLEEQAKVIVAARSNNEMDGAKLKKEFPELLSIKESLIKYVFVPNKK 797


>Medtr1g009600.1 | rhamnose biosynthetic-like enzyme | HC |
           chr1:1326040-1328412 | 20130731
          Length = 655

 Score =  488 bits (1255), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 225/284 (79%), Positives = 257/284 (90%)

Query: 15  LKFLIYGRTGWIGGLLGKLCDQQGIPYAYGDGRLENRPSLEADIAAVSPTHVFNAAGVTG 74
           LKFLIYGRTGWIGGLLGK+CD++ I + YG GRL++R S+  DI  V PTHV NAAGVTG
Sbjct: 371 LKFLIYGRTGWIGGLLGKICDEERIAWEYGRGRLQDRRSIMEDIKRVMPTHVLNAAGVTG 430

Query: 75  RPNVDWCESHKVETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYDSSHPLGSGVGFK 134
           RPNVDWCESHK ETI+TNVVGTLTLADVC++  L ++N+ATGCIFEYD  HPLGSG GFK
Sbjct: 431 RPNVDWCESHKAETIKTNVVGTLTLADVCKESDLYVMNFATGCIFEYDKEHPLGSGKGFK 490

Query: 135 EEDTPNFIGSFYSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPRNFITKITRYEKVVN 194
           EED PNFIGSFYSKTKAMVE+LLK Y+NVCTLRVRMPISSDL+NPRNFITKI+RY KVVN
Sbjct: 491 EEDKPNFIGSFYSKTKAMVEELLKEYDNVCTLRVRMPISSDLSNPRNFITKISRYNKVVN 550

Query: 195 IPNSMTILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYVDPNFTYKNFTLE 254
           IPNSMT+LDEL+PISIEMAKRNL GIWNFT+PGV+SHN+ILE+YRDY+DP++ + NF LE
Sbjct: 551 IPNSMTVLDELLPISIEMAKRNLKGIWNFTNPGVISHNQILELYRDYIDPSYKWVNFNLE 610

Query: 255 EQAKVIVAPRSNNELDASKLKKEFPQLLSIKDSLIKYVFDPNHK 298
           EQAKVIVAPRSNNE+DASKLK EFP+LLSIKDS+IK+VF+PN K
Sbjct: 611 EQAKVIVAPRSNNEMDASKLKNEFPELLSIKDSVIKFVFEPNKK 654


>Medtr3g452330.1 | rhamnose biosynthetic enzyme, putative | LC |
           chr3:19106509-19107661 | 20130731
          Length = 249

 Score =  118 bits (295), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 55/92 (59%), Positives = 62/92 (67%)

Query: 15  LKFLIYGRTGWIGGLLGKLCDQQGIPYAYGDGRLENRPSLEADIAAVSPTHVFNAAGVTG 74
            KFLIYG T WIGG LG + ++QGI   YG G  E+R  L  DI  +  THVFNA+GV G
Sbjct: 147 FKFLIYGGTWWIGGFLGNVWEKQGIELEYGIGYFEDRSELLVDIRTIKSTHVFNASGVIG 206

Query: 75  RPNVDWCESHKVETIRTNVVGTLTLADVCRQR 106
             NV W E HK ETIR  VVG LTLADVCR+R
Sbjct: 207 ELNVKWFEDHKSETIRPIVVGVLTLADVCRER 238


>Medtr4g063600.4 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491388-23486964 | 20130731
          Length = 345

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 86  VETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYDSSHPLGSGVGFKEEDTPNFIGSF 145
           V+TI+TNV+GTL +  + ++ G  ++  +T  ++     HP      +     P  + S 
Sbjct: 117 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPE--SYWGNVNPIGVRSC 174

Query: 146 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR----------NFITKITRYEKV-VN 194
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 175 YDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQ 234

Query: 195 IPNSMT----ILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYVDPNFTYK 249
            P + T     + +L+   I +   + TG  N  +PG  +  E+ E  ++ ++PN   K
Sbjct: 235 APGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMTELAETVKELINPNVEIK 293


>Medtr4g063600.3 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491560-23486964 | 20130731
          Length = 345

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 86  VETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYDSSHPLGSGVGFKEEDTPNFIGSF 145
           V+TI+TNV+GTL +  + ++ G  ++  +T  ++     HP      +     P  + S 
Sbjct: 117 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPE--SYWGNVNPIGVRSC 174

Query: 146 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR----------NFITKITRYEKV-VN 194
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 175 YDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQ 234

Query: 195 IPNSMT----ILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYVDPNFTYK 249
            P + T     + +L+   I +   + TG  N  +PG  +  E+ E  ++ ++PN   K
Sbjct: 235 APGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMTELAETVKELINPNVEIK 293


>Medtr4g063600.1 | UDP-glucuronic acid decarboxylase | HC |
           chr4:23491560-23486964 | 20130731
          Length = 345

 Score = 48.5 bits (114), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 17/179 (9%)

Query: 86  VETIRTNVVGTLTLADVCRQRGLILINYATGCIFEYDSSHPLGSGVGFKEEDTPNFIGSF 145
           V+TI+TNV+GTL +  + ++ G  ++  +T  ++     HP      +     P  + S 
Sbjct: 117 VKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPE--SYWGNVNPIGVRSC 174

Query: 146 YSKTKAMVEDLLKNYENVCTLRVRMPISSDLTNPR----------NFITKITRYEKV-VN 194
           Y + K + E L+ +Y     + +R+    +   PR          NFI +  R E + V 
Sbjct: 175 YDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGESLTVQ 234

Query: 195 IPNSMT----ILDELIPISIEMAKRNLTGIWNFTSPGVVSHNEILEMYRDYVDPNFTYK 249
            P + T     + +L+   I +   + TG  N  +PG  +  E+ E  ++ ++PN   K
Sbjct: 235 APGTQTRSFCYVSDLVDGLIRLMGGSDTGPINLGNPGEFTMTELAETVKELINPNVEIK 293