Miyakogusa Predicted Gene
- Lj2g3v2002660.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2002660.1 Non Characterized Hit- tr|Q55UY1|Q55UY1_CRYNB
Putative uncharacterized protein OS=Cryptococcus
neofo,37.12,1e-17,seg,NULL; Cornichon,Cornichon;
CORNICHON-RELATED,NULL,CUFF.38376.1
(137 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g011690.1 | cornichon family protein | HC | chr5:3406410-3... 189 7e-49
Medtr5g011690.2 | cornichon family protein | HC | chr5:3406410-3... 189 7e-49
Medtr4g102010.1 | cornichon family protein | HC | chr4:42217413-... 171 2e-43
Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC | chr7:... 115 9e-27
Medtr0311s0030.1 | cornichon family protein | HC | scaffold0311:... 109 1e-24
Medtr7g074930.1 | cornichon family protein | HC | chr7:28070017-... 70 5e-13
Medtr0311s0030.2 | cornichon family protein | HC | scaffold0311:... 70 5e-13
>Medtr5g011690.1 | cornichon family protein | HC |
chr5:3406410-3404005 | 20130731
Length = 137
Score = 189 bits (480), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 103/117 (88%)
Query: 21 VTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLC 80
VTYQLMCLA+LEFDY+NPYDFS +IN+V+LPE+ Q L+ FYLITGHW+MS FC+PYL
Sbjct: 21 VTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILTVFYLITGHWIMSFFCLPYLY 80
Query: 81 YNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDDHDD 137
+N R+Y Q+KHL+DVTEIFN L+WEKKQRLVKLFY+V TLF SV WMIYT+++DH++
Sbjct: 81 FNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTLFFSVFWMIYTTLEDHNE 137
>Medtr5g011690.2 | cornichon family protein | HC |
chr5:3406410-3404005 | 20130731
Length = 137
Score = 189 bits (480), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 83/117 (70%), Positives = 103/117 (88%)
Query: 21 VTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLC 80
VTYQLMCLA+LEFDY+NPYDFS +IN+V+LPE+ Q L+ FYLITGHW+MS FC+PYL
Sbjct: 21 VTYQLMCLAELEFDYLNPYDFSKRINSVMLPEFYTQAILTVFYLITGHWIMSFFCLPYLY 80
Query: 81 YNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITLFLSVIWMIYTSMDDHDD 137
+N R+Y Q+KHL+DVTEIFN L+WEKKQRLVKLFY+V TLF SV WMIYT+++DH++
Sbjct: 81 FNFRLYRQKKHLIDVTEIFNMLAWEKKQRLVKLFYLVSTLFFSVFWMIYTTLEDHNE 137
>Medtr4g102010.1 | cornichon family protein | HC |
chr4:42217413-42214878 | 20130731
Length = 137
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 98/137 (71%)
Query: 1 MADXXXXXXXXXXXXXXXXXVTYQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLS 60
MAD + YQLMCLADLEFDYINPYD +S+IN +VLPEYI L
Sbjct: 1 MADIFAWLFSFFTLIALIVIIIYQLMCLADLEFDYINPYDSASRINKMVLPEYITVAALC 60
Query: 61 CFYLITGHWVMSLFCVPYLCYNVRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITL 120
FYL+TGHWVM+L C PYL YN R+Y Q KHLVDVTEIFN L+ EKKQRL+KLFY++ L
Sbjct: 61 GFYLVTGHWVMALLCAPYLYYNYRLYSQGKHLVDVTEIFNMLAREKKQRLIKLFYLIFIL 120
Query: 121 FLSVIWMIYTSMDDHDD 137
FLS+ W+IYTS+DD D
Sbjct: 121 FLSLFWLIYTSLDDPYD 137
>Medtr7g092530.1 | ER-derived vesicles protein ERV14 | HC |
chr7:36697165-36690743 | 20130731
Length = 142
Score = 115 bits (289), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 85/117 (72%), Gaps = 5/117 (4%)
Query: 23 YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
YQ++ L+DLE DYINPYD SS+IN V+PE+I QG L +L TGHWVM L +P Y+
Sbjct: 25 YQVLMLSDLEADYINPYDASSKINYFVVPEFIGQGLLCALFLFTGHWVMFLLMLPLASYH 84
Query: 83 VRMYIQRKHLVDVTEIFNQLSWEKKQRLVKL-FY---IVITLF-LSVIWMIYTSMDD 134
V +Y++R+HL+DVTE+F L+ EKK R+VKL FY ++IT+F L +I + Y MDD
Sbjct: 85 VMLYVKRQHLLDVTEVFRVLNAEKKFRIVKLTFYLTLVMITIFRLVLIVVNYFDMDD 141
>Medtr0311s0030.1 | cornichon family protein | HC |
scaffold0311:9983-15900 | 20130731
Length = 127
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 71/98 (72%)
Query: 23 YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
YQ++ L+DLE DYINP++ SS+IN +LPE+I QG L L+TGHW+M L VP CY+
Sbjct: 25 YQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCALCLLTGHWLMFLLNVPVTCYH 84
Query: 83 VRMYIQRKHLVDVTEIFNQLSWEKKQRLVKLFYIVITL 120
+Y++R+HL+DVTE+F LS EKK R+ KL +I L
Sbjct: 85 AMLYVKREHLIDVTEVFRVLSAEKKFRIAKLVLYLIVL 122
>Medtr7g074930.1 | cornichon family protein | HC |
chr7:28070017-28072366 | 20130731
Length = 122
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 23 YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
YQL+ L DLEFDYINPYD +S++N V+LPE++I LI GHW + L +P L YN
Sbjct: 23 YQLILLVDLEFDYINPYDSTSRVNYVILPEFLIMAIFCFLNLIAGHWFIFLIALPCLYYN 82
Query: 83 VRMYIQRKH 91
V + ++ +
Sbjct: 83 VSIIMRPSN 91
>Medtr0311s0030.2 | cornichon family protein | HC |
scaffold0311:9876-14866 | 20130731
Length = 99
Score = 70.5 bits (171), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 45/63 (71%)
Query: 23 YQLMCLADLEFDYINPYDFSSQINTVVLPEYIIQGFLSCFYLITGHWVMSLFCVPYLCYN 82
YQ++ L+DLE DYINP++ SS+IN +LPE+I QG L L+TGHW+M L VP CY+
Sbjct: 25 YQVLILSDLESDYINPFEASSRINYFILPEFIGQGVLCALCLLTGHWLMFLLNVPVTCYH 84
Query: 83 VRM 85
+
Sbjct: 85 AML 87