Miyakogusa Predicted Gene

Lj2g3v2002610.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002610.1 tr|G7KG67|G7KG67_MEDTR CPD photolyase OS=Medicago
truncatula GN=MTR_5g011780 PE=4 SV=1,80.77,0,FAD_binding_7,DNA
photolyase, FAD-binding/Cryptochrome, C-terminal; DNA_photolyase,DNA
photolyase, N,CUFF.38373.1
         (496 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011780.1 | CPD photolyase | HC | chr5:3437049-3440858 | 2...   895   0.0  
Medtr5g011780.2 | CPD photolyase | HC | chr5:3437049-3440858 | 2...   790   0.0  
Medtr5g011780.3 | CPD photolyase | HC | chr5:3437049-3440858 | 2...   786   0.0  
Medtr5g011780.4 | CPD photolyase | HC | chr5:3437049-3440673 | 2...   739   0.0  

>Medtr5g011780.1 | CPD photolyase | HC | chr5:3437049-3440858 |
           20130731
          Length = 499

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/502 (84%), Positives = 465/502 (92%), Gaps = 10/502 (1%)

Query: 1   MASAPSPMS----VNPGRIRTLKEGSPRSNGESGPVVYWMFRDQRVRDNWALIHAVHQAN 56
           MA+ PSP S    VN GRIRTLKEGS    G++GPVVYWMFRDQR++DNWALIHAVHQAN
Sbjct: 1   MATTPSPPSMLPSVNSGRIRTLKEGS----GKTGPVVYWMFRDQRLKDNWALIHAVHQAN 56

Query: 57  KANVPVAVVFNLFDHFLGAKSRHLGFMLRGLRQLCHQLQHTLQIPFFLFRGEAEETVSKF 116
           KA VPVAVVFNLFDHFLGAK+RHLGFML+GLRQLCHQLQH+L IPFFL RGEAEETVSKF
Sbjct: 57  KAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHSLHIPFFLVRGEAEETVSKF 116

Query: 117 VRECGASLLVTDMSPLREVRRCKSEICERVGDSVMVHEVDAHNVVPIWVASDKLEYSART 176
           VRECGASLLVTDMSPLREV++CK+EICERV D V VHEVDAHNVVP+WVAS+KLEYSART
Sbjct: 117 VRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSART 176

Query: 177 IRGKINKKLPEYLTDFPDIEPQSRKWVVTEDRIIDWDDLIAEVLR-GAEVPEVDWCVPGE 235
           IRGKINKKL +YL DFPD+EP + KWV+TED +IDWDD+IA+VLR G+EVPEVDWC PGE
Sbjct: 177 IRGKINKKLSDYLVDFPDVEPPNTKWVITEDHVIDWDDIIAQVLRSGSEVPEVDWCEPGE 236

Query: 236 IAAMEVLMGSKNGFLTKRLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLR 294
           IAAMEVLMGSKNGFLTKRL++Y  DRNNPCK TALSGLSPYLHFGQISAQRCALEARKLR
Sbjct: 237 IAAMEVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLR 296

Query: 295 TSCPQAADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKE 354
            S PQA D FLEEL+VRRELADNFCYYQP YDS+QGAW+WARKTLLDHA+DKR+H+Y++E
Sbjct: 297 ASYPQAVDTFLEELIVRRELADNFCYYQPHYDSIQGAWEWARKTLLDHASDKRQHVYTRE 356

Query: 355 QLEKAQTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEI 414
           QLEKA+TAD LWNASQLEMVH+GKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYE+
Sbjct: 357 QLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEM 416

Query: 415 DGRDPNGYCGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVERYIAYVNKVVSEM 474
           DGRDP+GY GCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDV+RYIAYVNK+V E+
Sbjct: 417 DGRDPSGYNGCMWSICGVHDQGWRERPIFGKIRYMNYEGCKRKFDVDRYIAYVNKIVGEL 476

Query: 475 KKRKAENLISQKEKLLRSCDPE 496
           +KRKAENL+S+KEK+ R C+PE
Sbjct: 477 RKRKAENLLSEKEKVRRCCNPE 498


>Medtr5g011780.2 | CPD photolyase | HC | chr5:3437049-3440858 |
           20130731
          Length = 440

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/442 (84%), Positives = 408/442 (92%), Gaps = 10/442 (2%)

Query: 1   MASAPSPMS----VNPGRIRTLKEGSPRSNGESGPVVYWMFRDQRVRDNWALIHAVHQAN 56
           MA+ PSP S    VN GRIRTLKEGS    G++GPVVYWMFRDQR++DNWALIHAVHQAN
Sbjct: 1   MATTPSPPSMLPSVNSGRIRTLKEGS----GKTGPVVYWMFRDQRLKDNWALIHAVHQAN 56

Query: 57  KANVPVAVVFNLFDHFLGAKSRHLGFMLRGLRQLCHQLQHTLQIPFFLFRGEAEETVSKF 116
           KA VPVAVVFNLFDHFLGAK+RHLGFML+GLRQLCHQLQH+L IPFFL RGEAEETVSKF
Sbjct: 57  KAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHSLHIPFFLVRGEAEETVSKF 116

Query: 117 VRECGASLLVTDMSPLREVRRCKSEICERVGDSVMVHEVDAHNVVPIWVASDKLEYSART 176
           VRECGASLLVTDMSPLREV++CK+EICERV D V VHEVDAHNVVP+WVAS+KLEYSART
Sbjct: 117 VRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSART 176

Query: 177 IRGKINKKLPEYLTDFPDIEPQSRKWVVTEDRIIDWDDLIAEVLR-GAEVPEVDWCVPGE 235
           IRGKINKKL +YL DFPD+EP + KWV+TED +IDWDD+IA+VLR G+EVPEVDWC PGE
Sbjct: 177 IRGKINKKLSDYLVDFPDVEPPNTKWVITEDHVIDWDDIIAQVLRSGSEVPEVDWCEPGE 236

Query: 236 IAAMEVLMGSKNGFLTKRLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLR 294
           IAAMEVLMGSKNGFLTKRL++Y  DRNNPCK TALSGLSPYLHFGQISAQRCALEARKLR
Sbjct: 237 IAAMEVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLR 296

Query: 295 TSCPQAADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKE 354
            S PQA D FLEEL+VRRELADNFCYYQP YDS+QGAW+WARKTLLDHA+DKR+H+Y++E
Sbjct: 297 ASYPQAVDTFLEELIVRRELADNFCYYQPHYDSIQGAWEWARKTLLDHASDKRQHVYTRE 356

Query: 355 QLEKAQTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEI 414
           QLEKA+TAD LWNASQLEMVH+GKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYE+
Sbjct: 357 QLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEM 416

Query: 415 DGRDPNGYCGCMWSICGVHDQG 436
           DGRDP+GY GCMWSICGVHDQG
Sbjct: 417 DGRDPSGYNGCMWSICGVHDQG 438


>Medtr5g011780.3 | CPD photolyase | HC | chr5:3437049-3440858 |
           20130731
          Length = 450

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/441 (84%), Positives = 407/441 (92%), Gaps = 10/441 (2%)

Query: 1   MASAPSPMS----VNPGRIRTLKEGSPRSNGESGPVVYWMFRDQRVRDNWALIHAVHQAN 56
           MA+ PSP S    VN GRIRTLKEGS    G++GPVVYWMFRDQR++DNWALIHAVHQAN
Sbjct: 1   MATTPSPPSMLPSVNSGRIRTLKEGS----GKTGPVVYWMFRDQRLKDNWALIHAVHQAN 56

Query: 57  KANVPVAVVFNLFDHFLGAKSRHLGFMLRGLRQLCHQLQHTLQIPFFLFRGEAEETVSKF 116
           KA VPVAVVFNLFDHFLGAK+RHLGFML+GLRQLCHQLQH+L IPFFL RGEAEETVSKF
Sbjct: 57  KAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHSLHIPFFLVRGEAEETVSKF 116

Query: 117 VRECGASLLVTDMSPLREVRRCKSEICERVGDSVMVHEVDAHNVVPIWVASDKLEYSART 176
           VRECGASLLVTDMSPLREV++CK+EICERV D V VHEVDAHNVVP+WVAS+KLEYSART
Sbjct: 117 VRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSART 176

Query: 177 IRGKINKKLPEYLTDFPDIEPQSRKWVVTEDRIIDWDDLIAEVLR-GAEVPEVDWCVPGE 235
           IRGKINKKL +YL DFPD+EP + KWV+TED +IDWDD+IA+VLR G+EVPEVDWC PGE
Sbjct: 177 IRGKINKKLSDYLVDFPDVEPPNTKWVITEDHVIDWDDIIAQVLRSGSEVPEVDWCEPGE 236

Query: 236 IAAMEVLMGSKNGFLTKRLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLR 294
           IAAMEVLMGSKNGFLTKRL++Y  DRNNPCK TALSGLSPYLHFGQISAQRCALEARKLR
Sbjct: 237 IAAMEVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLR 296

Query: 295 TSCPQAADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKE 354
            S PQA D FLEEL+VRRELADNFCYYQP YDS+QGAW+WARKTLLDHA+DKR+H+Y++E
Sbjct: 297 ASYPQAVDTFLEELIVRRELADNFCYYQPHYDSIQGAWEWARKTLLDHASDKRQHVYTRE 356

Query: 355 QLEKAQTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEI 414
           QLEKA+TAD LWNASQLEMVH+GKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYE+
Sbjct: 357 QLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDKYEM 416

Query: 415 DGRDPNGYCGCMWSICGVHDQ 435
           DGRDP+GY GCMWSICGVHDQ
Sbjct: 417 DGRDPSGYNGCMWSICGVHDQ 437


>Medtr5g011780.4 | CPD photolyase | HC | chr5:3437049-3440673 |
           20130731
          Length = 418

 Score =  739 bits (1908), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/417 (84%), Positives = 384/417 (92%), Gaps = 10/417 (2%)

Query: 1   MASAPSPMS----VNPGRIRTLKEGSPRSNGESGPVVYWMFRDQRVRDNWALIHAVHQAN 56
           MA+ PSP S    VN GRIRTLKEGS    G++GPVVYWMFRDQR++DNWALIHAVHQAN
Sbjct: 1   MATTPSPPSMLPSVNSGRIRTLKEGS----GKTGPVVYWMFRDQRLKDNWALIHAVHQAN 56

Query: 57  KANVPVAVVFNLFDHFLGAKSRHLGFMLRGLRQLCHQLQHTLQIPFFLFRGEAEETVSKF 116
           KA VPVAVVFNLFDHFLGAK+RHLGFML+GLRQLCHQLQH+L IPFFL RGEAEETVSKF
Sbjct: 57  KAKVPVAVVFNLFDHFLGAKARHLGFMLKGLRQLCHQLQHSLHIPFFLVRGEAEETVSKF 116

Query: 117 VRECGASLLVTDMSPLREVRRCKSEICERVGDSVMVHEVDAHNVVPIWVASDKLEYSART 176
           VRECGASLLVTDMSPLREV++CK+EICERV D V VHEVDAHNVVP+WVAS+KLEYSART
Sbjct: 117 VRECGASLLVTDMSPLREVKKCKAEICERVSDLVTVHEVDAHNVVPLWVASEKLEYSART 176

Query: 177 IRGKINKKLPEYLTDFPDIEPQSRKWVVTEDRIIDWDDLIAEVLR-GAEVPEVDWCVPGE 235
           IRGKINKKL +YL DFPD+EP + KWV+TED +IDWDD+IA+VLR G+EVPEVDWC PGE
Sbjct: 177 IRGKINKKLSDYLVDFPDVEPPNTKWVITEDHVIDWDDIIAQVLRSGSEVPEVDWCEPGE 236

Query: 236 IAAMEVLMGSKNGFLTKRLKSY-LDRNNPCKTTALSGLSPYLHFGQISAQRCALEARKLR 294
           IAAMEVLMGSKNGFLTKRL++Y  DRNNPCK TALSGLSPYLHFGQISAQRCALEARKLR
Sbjct: 237 IAAMEVLMGSKNGFLTKRLRNYSTDRNNPCKPTALSGLSPYLHFGQISAQRCALEARKLR 296

Query: 295 TSCPQAADAFLEELVVRRELADNFCYYQPQYDSLQGAWDWARKTLLDHAADKREHIYSKE 354
            S PQA D FLEEL+VRRELADNFCYYQP YDS+QGAW+WARKTLLDHA+DKR+H+Y++E
Sbjct: 297 ASYPQAVDTFLEELIVRRELADNFCYYQPHYDSIQGAWEWARKTLLDHASDKRQHVYTRE 356

Query: 355 QLEKAQTADRLWNASQLEMVHFGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDK 411
           QLEKA+TAD LWNASQLEMVH+GKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDK
Sbjct: 357 QLEKAKTADPLWNASQLEMVHYGKMHGFMRMYWAKKILEWTRGPEEALEICIYLNDK 413