Miyakogusa Predicted Gene

Lj2g3v2002440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002440.1 Non Characterized Hit- tr|I3S0V1|I3S0V1_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,48.46,1e-17,no
description,Plant lipid transfer protein/hydrophobic protein helical
domain; LIPIDTRNSFER,Plant l,CUFF.38364.1
         (136 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011960.1 | Lipid transfer protein | HC | chr5:3531965-353...   102   1e-22
Medtr5g011980.2 | Lipid transfer protein | HC | chr5:3537211-353...   100   3e-22
Medtr5g011950.1 | lipid transfer protein | LC | chr5:3527544-352...   100   4e-22
Medtr4g101780.2 | Lipid transfer protein | HC | chr4:42100716-42...    94   4e-20
Medtr5g011980.1 | Lipid transfer protein | HC | chr5:3537154-353...    77   5e-15
Medtr4g101780.1 | Lipid transfer protein | HC | chr4:42100716-42...    72   2e-13

>Medtr5g011960.1 | Lipid transfer protein | HC |
           chr5:3531965-3531118 | 20130731
          Length = 156

 Score =  102 bits (253), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 10/137 (7%)

Query: 9   VLLVMGWALMVV-IAEAQDLPPCANQLSPCAAYLNSTSXXXXXXX-------XXXXXXDS 60
           V+L+M  ++ V+ I +AQ LPPC   L PC  Y NSTS                    D+
Sbjct: 8   VMLLMVISMSVISILDAQVLPPCGKPLLPCIEYANSTSHSIQDIYPPDICCTAIKDVFDA 67

Query: 61  TEKSCFCELALSPSILQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPA- 119
           T+++CFC+L  +P + + FG+      ++++ CGV FD + C ASSP  LP SS +PPA 
Sbjct: 68  TQETCFCQLVYTPGLFEAFGVKFTVGYRILRTCGVKFDTSFCNASSPT-LPLSSGKPPAA 126

Query: 120 TPGGDEGGAGRITFTGL 136
           TP GDEGGAGRI  TGL
Sbjct: 127 TPIGDEGGAGRIALTGL 143


>Medtr5g011980.2 | Lipid transfer protein | HC |
           chr5:3537211-3534586 | 20130731
          Length = 156

 Score =  100 bits (250), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 57/117 (48%), Positives = 78/117 (66%), Gaps = 4/117 (3%)

Query: 21  IAEAQDLPPCA-NQLSPCAAYLNSTSXXXXXXXXXXXXXDST-EKSCFCELALSPSILQG 78
           I +AQ LPPCA +++ PC  YLNST              ++T + +CFC+++ +P +L+ 
Sbjct: 28  IVDAQMLPPCAGDKMLPCTDYLNSTHPPDICCNPIKEIFEATHDYTCFCQIS-TPGLLES 86

Query: 79  FGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGGDEGGAGRITFTG 135
           FG+  A A+++V  CGV FD TSC+AS+P GL PS +QPPAT G D GGAG ITFTG
Sbjct: 87  FGVKLALAVKVVNSCGVKFDPTSCKASAP-GLSPSLMQPPATRGSDGGGAGMITFTG 142


>Medtr5g011950.1 | lipid transfer protein | LC |
           chr5:3527544-3525106 | 20130731
          Length = 145

 Score =  100 bits (249), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 59/134 (44%), Positives = 80/134 (59%), Gaps = 11/134 (8%)

Query: 12  VMGWALMVVIA-------EAQDLPPCANQ-LSPCAAYLNSTSXXXXXXXXXXXXXDSTEK 63
           ++ W LMVVI+       +AQ LPPCA+Q L PC  Y+NST               +T K
Sbjct: 1   MLIWVLMVVISMSVISLVDAQVLPPCADQILLPCIDYINSTQPPDICCNPIKDLY-ATHK 59

Query: 64  SCFCELALSPSILQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGG 123
           +CFC+L  +  + + FG+   Q  Q++ LCG+NF+ +SC ASSP  LP SS+QPPA   G
Sbjct: 60  TCFCQLIAAYGLFEAFGLKITQVFQVIYLCGINFNTSSCIASSPT-LPLSSLQPPAITRG 118

Query: 124 DEGG-AGRITFTGL 136
           DEGG AG+ T T +
Sbjct: 119 DEGGVAGKATLTRI 132


>Medtr4g101780.2 | Lipid transfer protein | HC |
           chr4:42100716-42109572 | 20130731
          Length = 148

 Score = 94.0 bits (232), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 8   VVLLVMGWALMVVIAEAQ--DLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSC 65
           V L+V+   LM+   EAQ  D+P CA  L PCA YLNST              + TE +C
Sbjct: 10  VSLMVL---LMINTTEAQSTDIPSCATNLIPCADYLNSTKPPSSCCDPIKKTVE-TELTC 65

Query: 66  FCELALSPSILQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGGDE 125
            C L  +P +L  F INT QAL L + CGV  DLT+C+ +     P S   PPAT GG++
Sbjct: 66  LCNLFYAPGLLATFNINTTQALALSRNCGVTTDLTTCKHNGSAPAPTSGGSPPATTGGNK 125

Query: 126 GGAGRITFTGL 136
             A R++FTG 
Sbjct: 126 AAASRVSFTGF 136


>Medtr5g011980.1 | Lipid transfer protein | HC |
           chr5:3537154-3534638 | 20130731
          Length = 135

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 7/118 (5%)

Query: 21  IAEAQDLPPCA-NQLSPCAAYLNSTSXXXXXXXXXXXXXDST-EKSCFCELALSPSILQG 78
           I +AQ LPPCA +++ PC  YLNST              ++T + +CFC+++ +P +L+ 
Sbjct: 23  IVDAQMLPPCAGDKMLPCTDYLNSTHPPDICCNPIKEIFEATHDYTCFCQIS-TPGLLES 81

Query: 79  FGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPPATPGGDEGGAGRITFTGL 136
           FG+  A A+++V  CGV FD TSC+AS+P GL PS +QP   PG          F GL
Sbjct: 82  FGVKLALAVKVVNSCGVKFDPTSCKASAP-GLSPSLMQP---PGKKPFNFSLFLFLGL 135


>Medtr4g101780.1 | Lipid transfer protein | HC |
           chr4:42100716-42102691 | 20130731
          Length = 141

 Score = 72.0 bits (175), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/113 (41%), Positives = 59/113 (52%), Gaps = 6/113 (5%)

Query: 8   VVLLVMGWALMVVIAEAQ--DLPPCANQLSPCAAYLNSTSXXXXXXXXXXXXXDSTEKSC 65
           V L+V+   LM+   EAQ  D+P CA  L PCA YLNST              + TE +C
Sbjct: 10  VSLMVL---LMINTTEAQSTDIPSCATNLIPCADYLNSTKPPSSCCDPIKKTVE-TELTC 65

Query: 66  FCELALSPSILQGFGINTAQALQLVQLCGVNFDLTSCEASSPVGLPPSSVQPP 118
            C L  +P +L  F INT QAL L + CGV  DLT+C+ +     P S   PP
Sbjct: 66  LCNLFYAPGLLATFNINTTQALALSRNCGVTTDLTTCKHNGSAPAPTSGGSPP 118