Miyakogusa Predicted Gene

Lj2g3v2002410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002410.1 tr|A4RQP9|A4RQP9_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_39676,34.12,2e-17,seg,NULL; coiled-coil,NULL,CUFF.38378.1
         (242 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g011990.1 | hypothetical protein | HC | chr5:3541247-35439...   330   8e-91

>Medtr5g011990.1 | hypothetical protein | HC | chr5:3541247-3543933
           | 20130731
          Length = 251

 Score =  330 bits (846), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 174/251 (69%), Positives = 189/251 (75%), Gaps = 9/251 (3%)

Query: 1   MAALSFGXXXXXXXXXXXXXYRVSPRNR-KSTISCIG--------WDPEGVLSPPQGGHL 51
           MA L+FG              R    +R KSTI CIG        WDPEGVL  P  GHL
Sbjct: 1   MATLNFGLATTNLNATSGFRTRTKSWSRGKSTIVCIGGGPIGPLDWDPEGVLGRPNTGHL 60

Query: 52  ARLEFKKSLEKDADAREAFXXXXXXXXXXXXAFRQSRVVPDSPQELIEYLLDTEAQDIEF 111
           ARLEFK+ LEKD+DAREAF            A R SR VPD+PQ+LIEYLLDTEAQ+IEF
Sbjct: 61  ARLEFKRRLEKDSDAREAFERQVREEKERRRALRDSRDVPDTPQDLIEYLLDTEAQEIEF 120

Query: 112 EISRTRPRLNEEFFAHLKFELGQLRFAVNKTQDVEDRLIELEALEKAIQEGTEAYDKMQT 171
           EI+R RPRLN+EF   LK ELGQLRFAVNKTQ  EDRL ELEALEKAIQEGT+AYDKMQ 
Sbjct: 121 EIARMRPRLNDEFILALKSELGQLRFAVNKTQLTEDRLTELEALEKAIQEGTDAYDKMQA 180

Query: 172 ELIKAKESLTTILTSKDVKATLLEMVERNELNRSLLALLDENITSAHQGNQKQAAEYMEK 231
           +LIKAKE+LT ILTSKDVKATLLE+VERNE+NRSLL LLDENI+SAH  NQKQAAEYMEK
Sbjct: 181 QLIKAKENLTKILTSKDVKATLLELVERNEINRSLLTLLDENISSAHGANQKQAAEYMEK 240

Query: 232 LRGAVLKYITV 242
           LRGAVLKYITV
Sbjct: 241 LRGAVLKYITV 251