Miyakogusa Predicted Gene

Lj2g3v2002340.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002340.1 Non Characterized Hit- tr|C5Z239|C5Z239_SORBI
Putative uncharacterized protein Sb10g000460
OS=Sorghu,36.95,4e-18,seg,NULL,CUFF.38348.1
         (195 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g101680.1 | transcription factor | HC | chr4:42049132-4204...   120   8e-28
Medtr5g012080.1 | transcription factor | HC | chr5:3572221-35767...   100   2e-21
Medtr4g036030.1 | transcription factor | HC | chr4:12849080-1285...    92   2e-19

>Medtr4g101680.1 | transcription factor | HC |
           chr4:42049132-42045198 | 20130731
          Length = 364

 Score =  120 bits (301), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/215 (43%), Positives = 112/215 (52%), Gaps = 31/215 (14%)

Query: 3   TTIRKMGDYG-SPC-WYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEM-QYNV 59
           TT++KM +Y  SPC WYDDQVSFM +LESP                  CK ELE+ QYN 
Sbjct: 159 TTVQKMNEYDQSPCNWYDDQVSFMPDLESPTRTNSHPPNYTSYHS---CKPELELIQYNT 215

Query: 60  -TRTHDA-FLQLPQLESPKLLQSYGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXXX 117
             + HDA FLQLP LESPK+ QS                                     
Sbjct: 216 PHQYHDANFLQLPHLESPKITQS------IIPYNHHAHANNNNIALTQQMQYLQYHQQNL 269

Query: 118 XXXYGSN-----NDQVTDWRVLDKFVASQLSHEQ---------HASKDETS-YSNVA--E 160
              YG N     ++QVTDWRVLDKFVASQLSHE          H S  ETS +SN A   
Sbjct: 270 HSLYGGNSSTGNDEQVTDWRVLDKFVASQLSHEDNDNNNNNQDHVSNKETSSFSNAAILH 329

Query: 161 DQEQFTLLPNGSEKPEINQKYASTTTSSCQIDPWK 195
             EQ TLL NGS+K E+++++AST+TSSC ++ WK
Sbjct: 330 VAEQITLLDNGSKKNEVSEEHASTSTSSCHMELWK 364


>Medtr5g012080.1 | transcription factor | HC | chr5:3572221-3576785
           | 20130731
          Length = 349

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 102/213 (47%), Gaps = 41/213 (19%)

Query: 1   MPTTIRKMGDYGSPCWYDDQVSFMQ-ELESPNXXXXX---XXXXXXXXXXXPCKQEL-EM 55
           + TT+RKM D  SPCWYDDQVSFMQ ELESP+                   PCKQEL ++
Sbjct: 160 IATTMRKMDD--SPCWYDDQVSFMQSELESPSRISSHHPYNASYQHQQQHYPCKQELDQL 217

Query: 56  QYNV-TRTHDA--FLQLPQLESPKLLQSYGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXX 112
           QYN+    +DA  FLQLPQLE+                                      
Sbjct: 218 QYNIHINNNDANNFLQLPQLEN------------------LNSPMQCSLSTHSMTQEQYG 259

Query: 113 XXXXXXXXYGSNND------QVTDWRVLDKFVASQLSHEQ-HASKDETSYSNVAEDQEQF 165
                   YG +ND      Q  +W+ LDKFVAS+LS +Q HASK  +SY NVA   +Q 
Sbjct: 260 QQQSMQMLYGGSNDLQAVVEQSNEWKALDKFVASRLSQDQDHASKGTSSYCNVA---QQI 316

Query: 166 TLLPNG-SEKPEIN--QKYASTTTSSCQIDPWK 195
            LL N  S+K E    +   S + S+CQID WK
Sbjct: 317 ALLSNDESKKSETGGQEHVTSISNSNCQIDTWK 349


>Medtr4g036030.1 | transcription factor | HC |
           chr4:12849080-12853325 | 20130731
          Length = 346

 Score = 92.4 bits (228), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 1   MPTTIRKMGDYGSPCWYDDQVSFMQELESPNXXXXXXXXXXXXXXXXPCKQELEMQYNVT 60
           + TTIRKM ++ SPCWY+DQVSFMQ+++SPN                 CK+EL+      
Sbjct: 158 VTTTIRKMSEHDSPCWYEDQVSFMQDMDSPNQTSQSNLIYQQLPSYT-CKKELDNLPFQN 216

Query: 61  RTHDAFLQLPQLESPKLLQS----YGYDHXXXXXXXXXXXXXXXXPXXXXXXXXXXXXXX 116
            +HD FL LP LESPKL+QS       DH                               
Sbjct: 217 FSHDHFLNLPLLESPKLVQSSSNITSIDHSNPMFPSSVL-------LEEEQILQSGNQQN 269

Query: 117 XXXXYGSN---------NDQVTDWRVLDKFVASQLSHEQHASKDETSYSNVAEDQEQFTL 167
               YG+N         +DQVTDWRVLDKFVASQLS +  ASK+    +N+     +F  
Sbjct: 270 FHAMYGNNSNVEQGMVDDDQVTDWRVLDKFVASQLSQDD-ASKENN--NNIFHGNIEFRN 326

Query: 168 LPNGSEKPEINQKYASTTTSS 188
           L      P  N   AST+ +S
Sbjct: 327 LEKQEMVPHEN---ASTSNTS 344