Miyakogusa Predicted Gene

Lj2g3v2002110.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2002110.1 Non Characterized Hit- tr|I3SEQ0|I3SEQ0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.85,8.40779e-45,Motile_Sperm,Major sperm protein; no
description,PapD-like; VESICLE-ASSOCIATED MEMBRANE
PROTEIN-ASSO,NODE_60318_length_361_cov_171.036011.path2.1
         (88 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g012420.1 | VAMP-associated protein | HC | chr5:3721097-37...   168   9e-43
Medtr4g101020.1 | VAMP-associated protein | HC | chr4:41712222-4...   164   2e-41
Medtr4g027050.1 | VAMP-associated protein | HC | chr4:9310428-93...   161   1e-40
Medtr4g118760.2 | VAMP-associated protein | HC | chr4:49201562-4...   136   5e-33
Medtr4g118760.1 | VAMP-associated protein | HC | chr4:49201562-4...   136   5e-33
Medtr4g026830.1 | VAMP-associated protein | LC | chr4:9255936-92...   131   1e-31
Medtr4g026650.1 | MSP (major sperm protein) domain protein | HC ...   131   2e-31
Medtr4g026620.1 | vesicle-associated protein | HC | chr4:9154057...   129   6e-31
Medtr4g026780.3 | MSP (major sperm protein) domain protein | LC ...   122   5e-29
Medtr4g026780.2 | MSP (major sperm protein) domain protein | LC ...   122   5e-29
Medtr0135s0080.1 | vesicle-associated protein | HC | scaffold013...   122   5e-29
Medtr4g026780.4 | MSP (major sperm protein) domain protein | LC ...   122   6e-29
Medtr4g026780.1 | MSP (major sperm protein) domain protein | LC ...   122   6e-29
Medtr4g026780.5 | MSP (major sperm protein) domain protein | LC ...   122   7e-29
Medtr1g081950.1 | VAMP-associated protein | HC | chr1:36513588-3...   118   1e-27
Medtr5g013320.1 | VAMP-associated protein | HC | chr5:4204900-42...   117   3e-27
Medtr4g026540.1 | MSP (major sperm protein) domain protein | HC ...    97   4e-21
Medtr0753s0030.1 | VAMP-associated protein | LC | scaffold0753:5...    91   3e-19
Medtr8g056020.1 | ankyrin repeat RF-like protein, putative | HC ...    50   5e-07

>Medtr5g012420.1 | VAMP-associated protein | HC |
          chr5:3721097-3717329 | 20130731
          Length = 243

 Score =  168 bits (426), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 77/88 (87%), Positives = 85/88 (96%)

Query: 1  MSTGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVL 60
          MSTGDLL+I+P+ELKF+FELKKQISCSLQLSN+TD YVAFKVKTTNP+KYCVRPNTGVVL
Sbjct: 3  MSTGDLLNIEPVELKFLFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGVVL 62

Query: 61 PRSTCDVTVTMQAQKEAPPDMQCKDKFL 88
          P+STC+V VTMQAQKE PPDMQCKDKFL
Sbjct: 63 PQSTCEVIVTMQAQKEVPPDMQCKDKFL 90


>Medtr4g101020.1 | VAMP-associated protein | HC |
          chr4:41712222-41717671 | 20130731
          Length = 242

 Score =  164 bits (414), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 76/85 (89%), Positives = 80/85 (94%)

Query: 4  GDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRS 63
          GDLL I+PLELKF FELKKQISCSLQLSN+TD YVAFKVKTTNP+KYCVRPNTG+VLPRS
Sbjct: 5  GDLLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPRKYCVRPNTGIVLPRS 64

Query: 64 TCDVTVTMQAQKEAPPDMQCKDKFL 88
          TCDV VTMQAQKEAP DMQCKDKFL
Sbjct: 65 TCDVMVTMQAQKEAPADMQCKDKFL 89


>Medtr4g027050.1 | VAMP-associated protein | HC |
          chr4:9310428-9306771 | 20130731
          Length = 240

 Score =  161 bits (408), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 73/88 (82%), Positives = 81/88 (92%)

Query: 1  MSTGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVL 60
          MS+G+LL I P EL+F FEL+KQISCSLQLSN++D Y+AFKVKTTNPKKYCVRPN GVVL
Sbjct: 1  MSSGELLQIHPQELQFPFELRKQISCSLQLSNKSDNYIAFKVKTTNPKKYCVRPNNGVVL 60

Query: 61 PRSTCDVTVTMQAQKEAPPDMQCKDKFL 88
          PRSTCD+TVTMQ QKEAPPDMQCKDKFL
Sbjct: 61 PRSTCDITVTMQGQKEAPPDMQCKDKFL 88


>Medtr4g118760.2 | VAMP-associated protein | HC |
          chr4:49201562-49205102 | 20130731
          Length = 306

 Score =  136 bits (342), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 73/86 (84%)

Query: 3  TGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPR 62
          T +LL IDP EL+F+FELKKQ SC +QL+N+ D+Y+AFKVKTT+PKKYCVRPN G++ P+
Sbjct: 2  TTELLQIDPSELRFVFELKKQSSCLIQLANKIDQYIAFKVKTTSPKKYCVRPNIGIIKPK 61

Query: 63 STCDVTVTMQAQKEAPPDMQCKDKFL 88
            CD TVTMQAQ+ APPDM CKDKFL
Sbjct: 62 DKCDFTVTMQAQRTAPPDMHCKDKFL 87


>Medtr4g118760.1 | VAMP-associated protein | HC |
          chr4:49201562-49205102 | 20130731
          Length = 294

 Score =  136 bits (342), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 60/86 (69%), Positives = 73/86 (84%)

Query: 3  TGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPR 62
          T +LL IDP EL+F+FELKKQ SC +QL+N+ D+Y+AFKVKTT+PKKYCVRPN G++ P+
Sbjct: 2  TTELLQIDPSELRFVFELKKQSSCLIQLANKIDQYIAFKVKTTSPKKYCVRPNIGIIKPK 61

Query: 63 STCDVTVTMQAQKEAPPDMQCKDKFL 88
            CD TVTMQAQ+ APPDM CKDKFL
Sbjct: 62 DKCDFTVTMQAQRTAPPDMHCKDKFL 87


>Medtr4g026830.1 | VAMP-associated protein | LC |
           chr4:9255936-9261365 | 20130731
          Length = 214

 Score =  131 bits (330), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 62/82 (75%), Positives = 69/82 (84%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           LHI P EL F  ELKK ISC LQLSN++D Y+AFKVKTT P+KYCVRPN GV+LP STCD
Sbjct: 25  LHIHPQELHFPLELKKNISCCLQLSNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPMSTCD 84

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           + VTMQA +EAPPDMQCKDKFL
Sbjct: 85  IIVTMQALEEAPPDMQCKDKFL 106


>Medtr4g026650.1 | MSP (major sperm protein) domain protein | HC |
           chr4:9169551-9167721 | 20130731
          Length = 177

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 69/82 (84%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           LH+ P EL F  ELKK ISC LQLSN++D Y+AFKVKTT P+KYCVRPN GV+LP STCD
Sbjct: 25  LHMHPHELHFPLELKKNISCCLQLSNKSDNYLAFKVKTTIPEKYCVRPNIGVMLPMSTCD 84

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           + VTMQA +EAPPDMQCKDKFL
Sbjct: 85  IIVTMQALEEAPPDMQCKDKFL 106


>Medtr4g026620.1 | vesicle-associated protein | HC |
           chr4:9154057-9158270 | 20130731
          Length = 199

 Score =  129 bits (324), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 61/82 (74%), Positives = 69/82 (84%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L I P EL F FELKKQIS S Q+SN++D Y+AFKVKTT P+KYCVRPN GVVLPRSTCD
Sbjct: 19  LQIHPQELHFPFELKKQISISFQMSNKSDNYLAFKVKTTIPEKYCVRPNNGVVLPRSTCD 78

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           + VTMQAQK+APP+M C DKFL
Sbjct: 79  IQVTMQAQKKAPPNMHCIDKFL 100


>Medtr4g026780.3 | MSP (major sperm protein) domain protein | LC |
           chr4:9230791-9239643 | 20130731
          Length = 195

 Score =  122 bits (307), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr4g026780.2 | MSP (major sperm protein) domain protein | LC |
           chr4:9230791-9239643 | 20130731
          Length = 204

 Score =  122 bits (307), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr0135s0080.1 | vesicle-associated protein | HC |
           scaffold0135:36657-38641 | 20130731
          Length = 162

 Score =  122 bits (307), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr4g026780.4 | MSP (major sperm protein) domain protein | LC |
           chr4:9230791-9239643 | 20130731
          Length = 178

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr4g026780.1 | MSP (major sperm protein) domain protein | LC |
           chr4:9230791-9239736 | 20130731
          Length = 246

 Score =  122 bits (307), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr4g026780.5 | MSP (major sperm protein) domain protein | LC |
           chr4:9230791-9238051 | 20130731
          Length = 238

 Score =  122 bits (306), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 58/82 (70%), Positives = 67/82 (81%)

Query: 7   LHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCD 66
           L+I P EL F  ELKK ISCSLQL N++D Y+AFKVKTT P+KYCVRPN GV+LP S  D
Sbjct: 24  LYIHPQELHFPLELKKNISCSLQLWNKSDNYLAFKVKTTIPEKYCVRPNIGVLLPTSISD 83

Query: 67  VTVTMQAQKEAPPDMQCKDKFL 88
           +TVTMQA +EAPPDMQ KDKF+
Sbjct: 84  ITVTMQALEEAPPDMQLKDKFI 105


>Medtr1g081950.1 | VAMP-associated protein | HC |
          chr1:36513588-36518631 | 20130731
          Length = 435

 Score =  118 bits (296), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 70/88 (79%)

Query: 1  MSTGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVL 60
          M+   +L I+P ELKFIFELKKQ SC++Q++N T  +VAFKVKTT+PKKY VRPN GV+ 
Sbjct: 1  MNKTPILEIEPRELKFIFELKKQSSCTVQVTNNTYHHVAFKVKTTSPKKYSVRPNVGVLA 60

Query: 61 PRSTCDVTVTMQAQKEAPPDMQCKDKFL 88
          P++T +  VTMQAQ+ AP D+ CKDKFL
Sbjct: 61 PKATSEFIVTMQAQRVAPEDLVCKDKFL 88


>Medtr5g013320.1 | VAMP-associated protein | HC |
          chr5:4204900-4209367 | 20130731
          Length = 220

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 55/88 (62%), Positives = 68/88 (77%)

Query: 1  MSTGDLLHIDPLELKFIFELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVL 60
          M+   L+ I P EL+F FEL+KQ  C L++ N T+ YVAFKVKTT+PKKY VRPNTGV+ 
Sbjct: 1  MTATPLITISPDELRFHFELEKQTFCDLKVLNNTENYVAFKVKTTSPKKYFVRPNTGVIH 60

Query: 61 PRSTCDVTVTMQAQKEAPPDMQCKDKFL 88
          P  +C + VT+QAQ+E PPDMQCKDKFL
Sbjct: 61 PWDSCIIRVTLQAQREYPPDMQCKDKFL 88


>Medtr4g026540.1 | MSP (major sperm protein) domain protein | HC |
          chr4:9135444-9133001 | 20130731
          Length = 195

 Score = 96.7 bits (239), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 48/72 (66%), Positives = 57/72 (79%), Gaps = 1/72 (1%)

Query: 18 FELKKQISCSLQLSNQTDEYVAFKVKTTNPKKYCVRPNTGVVLP-RSTCDVTVTMQAQKE 76
          FEL K IS + +L N++D YVAFKV T NPK +CV PN  +VLP RSTCD+ VTMQAQ+E
Sbjct: 26 FELGKLISFTKKLLNKSDRYVAFKVNTPNPKTFCVTPNPLLVLPPRSTCDIKVTMQAQEE 85

Query: 77 APPDMQCKDKFL 88
          APPDMQCKD F+
Sbjct: 86 APPDMQCKDTFV 97


>Medtr0753s0030.1 | VAMP-associated protein | LC |
          scaffold0753:5472-6055 | 20130731
          Length = 88

 Score = 90.5 bits (223), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/70 (65%), Positives = 56/70 (80%), Gaps = 3/70 (4%)

Query: 19 ELKKQISCSLQLSNQTDEYVAFKVKTT--NPKKYCVRPN-TGVVLPRSTCDVTVTMQAQK 75
          EL+K+ SC+L LSN++D YVAFKV++T  N +KY V P+  GVVLPRSTCD+ VTM  QK
Sbjct: 1  ELRKESSCTLILSNKSDHYVAFKVRSTCGNAQKYYVDPSCIGVVLPRSTCDIIVTMLGQK 60

Query: 76 EAPPDMQCKD 85
          EAP DMQCKD
Sbjct: 61 EAPLDMQCKD 70


>Medtr8g056020.1 | ankyrin repeat RF-like protein, putative | HC |
          chr8:24390244-24392640 | 20130731
          Length = 361

 Score = 49.7 bits (117), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 10 DPLELKFIFELKKQISCSLQLS--NQTDEYVAFKVKTTNPKKYCVRPNTGVVLPRSTCDV 67
          +P E++  F L  +   ++QL   N T+  +AFK++T++P K+ V P TG++ P S    
Sbjct: 11 EPAEVRIEFTLNSKCRTTIQLKSLNPTNP-IAFKIQTSSPHKFLVNPPTGLIPPLSMSTF 69

Query: 68 TVTMQAQKEAPPDM--QCKDKFL 88
           V ++ Q   PP      KD+FL
Sbjct: 70 QVILKPQSHLPPSYPRSPKDRFL 92