Miyakogusa Predicted Gene
- Lj2g3v2001600.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v2001600.1 tr|G7JW40|G7JW40_MEDTR Matrix
metalloproteinase-28 OS=Medicago truncatula GN=MTR_5g012680 PE=4
SV=1,75.42,0,Metalloproteases ("zincins"), catalytic domain,NULL;
PGBD-like,Peptidoglycan binding-like; seg,NULL;,CUFF.38325.1
(362 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g012680.1 | matrix metalloproteinase | HC | chr5:3865811-3... 542 e-154
Medtr8g005900.1 | matrix metalloproteinase | HC | chr8:389041-38... 353 2e-97
Medtr5g036410.1 | matrix metalloproteinase | HC | chr5:15865380-... 297 9e-81
Medtr8g062770.1 | matrix metalloproteinase | HC | chr8:26254815-... 278 6e-75
Medtr6g008480.1 | matrix metalloproteinase | HC | chr6:2284438-2... 179 5e-45
Medtr5g036080.1 | matrix metalloproteinase | HC | chr5:15713228-... 169 5e-42
Medtr5g036087.1 | matrix metalloproteinase | LC | chr5:15720721-... 131 8e-31
Medtr5g036083.1 | matrixin family protein | LC | chr5:15716962-1... 131 1e-30
Medtr5g036093.1 | matrix metalloproteinase | LC | chr5:15723305-... 126 3e-29
Medtr5g036360.1 | matrix metalloproteinase | LC | chr5:15835981-... 120 3e-27
Medtr5g036290.1 | matrixin family protein | LC | chr5:15818918-1... 118 7e-27
Medtr5g036270.1 | matrixin family protein | LC | chr5:15813229-1... 104 1e-22
Medtr5g036310.1 | matrixin family protein | LC | chr5:15823336-1... 86 7e-17
Medtr5g036110.1 | matrixin family protein | LC | chr5:15729479-1... 64 2e-10
Medtr2g079050.1 | peptidoglycan-binding domain protein | HC | ch... 52 7e-07
>Medtr5g012680.1 | matrix metalloproteinase | HC |
chr5:3865811-3864354 | 20130731
Length = 358
Score = 542 bits (1397), Expect = e-154, Method: Compositional matrix adjust.
Identities = 256/332 (77%), Positives = 290/332 (87%), Gaps = 1/332 (0%)
Query: 25 RPCFPTRIIPESVTVITT-QTRNATWHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLP 83
RPCFP RIIPESVTVITT Q NATWHDFSRFLHAE GSHV+GMAELK YF+RFGYL+ P
Sbjct: 20 RPCFPARIIPESVTVITTTQKHNATWHDFSRFLHAEPGSHVSGMAELKKYFNRFGYLSPP 79
Query: 84 ETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCGVSDXXXXHGLHTT 143
T +NFTDTFD+ +SA++ YQK L LPITGKLD +TIS IV+PRCGVSD H +HTT
Sbjct: 80 LTTANFTDTFDSSFQSAVVLYQKNLGLPITGKLDSNTISTIVSPRCGVSDTAATHRIHTT 139
Query: 144 GHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWASVIPVSFQEV 203
H+AYF+GKPRWLRG+PMTLTYAFSPYNMI+ LS+ EI+TVFERAFARWA VIPVSF+
Sbjct: 140 QHFAYFNGKPRWLRGSPMTLTYAFSPYNMIDTLSLSEIQTVFERAFARWAKVIPVSFRLT 199
Query: 204 EKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVDFDHDKSKV 263
EK++SADI+IGFY+GDHGDGEPFDGVLGVL HAFSP NGRFHLDAAE W+VDF+HD S+V
Sbjct: 200 EKYQSADIKIGFYNGDHGDGEPFDGVLGVLAHAFSPQNGRFHLDAAENWAVDFNHDDSRV 259
Query: 264 AVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEGVQALYGSNPNFS 323
AVDLESVATHEIGHVLGLGHSS+KEAVMYP+LSPR KKVDL+IDDVEGVQ+LYGSNPNF+
Sbjct: 260 AVDLESVATHEIGHVLGLGHSSIKEAVMYPNLSPRRKKVDLKIDDVEGVQSLYGSNPNFT 319
Query: 324 FSSFLQSENSYNHAVGLETSFSKWTLFWAIAF 355
FSS LQSENS+N AV LET F KW + ++
Sbjct: 320 FSSLLQSENSFNLAVRLETGFYKWIFYLGVSL 351
>Medtr8g005900.1 | matrix metalloproteinase | HC |
chr8:389041-387649 | 20130731
Length = 352
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/318 (57%), Positives = 226/318 (71%), Gaps = 15/318 (4%)
Query: 50 HDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLS 109
HD F +A RG+++TG+++ K Y RFGY+ +T F+D FD+ ESA++ YQ+ L
Sbjct: 35 HDIHSFTNAVRGNNITGISQFKRYLSRFGYIKNNDT---FSDKFDSNFESAIIKYQRNLG 91
Query: 110 LPITGKLDKDTISAIVAPRCGVSDXXXXHGLHTTG--------HYAYFDGKPRWLRGTPM 161
L +TGKLD +T+S ++ PRCGV D H H ++ YF GKPRW R PM
Sbjct: 92 LQVTGKLDSNTVSQMITPRCGVPDTTKTHHYHNHHQNHIHNKTNFVYFPGKPRWSRDMPM 151
Query: 162 TLTYAFSPYNMINRLSVKEIRTVFERAFARWASVIPVSFQEVEKFESADIRIGFYSGDHG 221
TLTY FS MI+ LS++EIR F+RAF+RW+SVIPVSF E E + ADI+IGFYSGDHG
Sbjct: 152 TLTYGFSSDYMIHNLSIQEIREAFKRAFSRWSSVIPVSFVESEDYGFADIKIGFYSGDHG 211
Query: 222 DGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGL 281
DGEPFDGVLGVL H+FSP GR HLDAAE W+VDF KS+VA+DLESVATHEIGH+LGL
Sbjct: 212 DGEPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFGVTKSEVAIDLESVATHEIGHLLGL 271
Query: 282 GHSSVKEAVMYPSLSPRGKKVDLRIDDVEGVQALYGSNPNF-SFSSFLQSENSYNHAV-- 338
HSS+KEAVMYPSL PR K+ DL IDD++GVQ+LYGSNPNF S S L+S+ S NH
Sbjct: 272 SHSSLKEAVMYPSLRPRDKRADLNIDDIKGVQSLYGSNPNFRSQWSSLESDISTNHGAKF 331
Query: 339 GLET-SFSKWTLFWAIAF 355
G++T FS AIA
Sbjct: 332 GVDTYRFSMIASIIAIAL 349
>Medtr5g036410.1 | matrix metalloproteinase | HC |
chr5:15865380-15863815 | 20130731
Length = 368
Score = 297 bits (761), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 154/312 (49%), Positives = 200/312 (64%), Gaps = 26/312 (8%)
Query: 31 RIIPESVTVITTQTRNA---TWHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPETP- 86
R P+ ++ + NA W + F RG G+++LK+YF+ FGY+ P P
Sbjct: 28 RFFPDPSSMPAWNSSNAPPGAWDGYKNFTGCSRGKTYDGLSKLKNYFNHFGYI--PNGPP 85
Query: 87 SNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCGVSD------------- 133
SNFTD FD LESA+ +YQK +L ITG+LD T++ IV PRCGV+D
Sbjct: 86 SNFTDDFDEALESAVRTYQKNFNLNITGELDDATMNYIVKPRCGVADIINGTTSMNSGKF 145
Query: 134 XXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWA 193
HT HY++F G+PRW GT TLTYAF P ++ + + VF AF +W+
Sbjct: 146 NSSSTNFHTVAHYSFFPGQPRWPEGT-QTLTYAFDPSENLDDAT----KQVFANAFNQWS 200
Query: 194 SVIPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWS 253
V ++F E + S+DI+IGFYSGDHGDGE FDGVLG L HAFSP +GR HLD AE W
Sbjct: 201 KVTTITFTEATSYSSSDIKIGFYSGDHGDGEAFDGVLGTLAHAFSPTDGRLHLDKAEDWV 260
Query: 254 VDFDHDKSKV--AVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDLRIDDVEG 311
V+ D +S + AVDLESV HEIGH+LGLGHSS++EA+MYP++S R KKV+L DD+EG
Sbjct: 261 VNGDVTESSLSNAVDLESVVVHEIGHLLGLGHSSIEEAIMYPTISSRTKKVELESDDIEG 320
Query: 312 VQALYGSNPNFS 323
+Q LYGSNPNF+
Sbjct: 321 IQMLYGSNPNFT 332
>Medtr8g062770.1 | matrix metalloproteinase | HC |
chr8:26254815-26256142 | 20130731
Length = 373
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 209/354 (59%), Gaps = 38/354 (10%)
Query: 26 PCFPTRIIPESVTVITTQTRNATWHDFSRFLHAERGSHVTGMAELKSYFHRFGYLTLPET 85
P P+ I P ++ V W F F +G + G++ LK+YF FGY+ P +
Sbjct: 27 PDVPSWIPPGTLPV-------GPWDAFRNFTGCRQGENYNGLSNLKNYFQHFGYI--PRS 77
Query: 86 P-SNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCGVSDXXXXHG----- 139
P SNF+D FD L+ A+ +YQK +L +TG+LD T+ ++ PRCGV+D
Sbjct: 78 PKSNFSDDFDDDLQEAIKTYQKNFNLNVTGELDDMTLRQVMLPRCGVADIINGTTTMNAG 137
Query: 140 --------------LHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVF 185
HT H+ F G+PRW G LTYAF P N + + +++VF
Sbjct: 138 KDTETTSNSDSKLRFHTVSHFTVFPGQPRWPEGK-QELTYAFFPGNEL----TETVKSVF 192
Query: 186 ERAFARWASVIPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFH 245
AFARW+ V + F E + ADI+IGF++GDHGDGEPFDG LG L HAFSP NGRFH
Sbjct: 193 ATAFARWSEVTTLKFTETTLYSGADIKIGFFNGDHGDGEPFDGSLGTLAHAFSPRNGRFH 252
Query: 246 LDAAEAWSVDFDHDKSKV--AVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVD 303
LDAAE W V D KS + AVDLESVA HEIGH+LGLGHSS +EA+M+P++S R KKV
Sbjct: 253 LDAAEDWVVSGDVSKSSLPTAVDLESVAVHEIGHLLGLGHSSEEEAIMFPTISSRMKKVV 312
Query: 304 LRIDDVEGVQALYGSNPNFSFSSFLQS--ENSYNHAVGLETSFSKWTLFWAIAF 355
L DDV G+Q LYG+NP+F+ S+ + S N N L + +S W LF + F
Sbjct: 313 LADDDVRGIQYLYGTNPSFNGSTVISSPERNIGNGGCSLTSLWSPWRLFSLLTF 366
>Medtr6g008480.1 | matrix metalloproteinase | HC |
chr6:2284438-2282192 | 20130731
Length = 333
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 160/312 (51%), Gaps = 38/312 (12%)
Query: 38 TVITTQTRNATWHDFSRFLH----AERGSHVTGMAELKSYFHRFGYLTLPE--TPSN-FT 90
+++ ++T + F++ L ++G G+ ELK+Y RFGYL + TPS
Sbjct: 23 SIVESRTIKPSKDSFTQSLQNLKGVQKGQTQKGIGELKNYLKRFGYLNVQHDATPSTTLN 82
Query: 91 DTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAPRCGVSD----XXXXHGLHTTGHY 146
D FD LE AL +Q L +TG++D TI + PRCGV D +GL + Y
Sbjct: 83 DHFDENLEFALKDFQTYHHLHVTGRVDTTTIKILSLPRCGVPDLPKHSHKQNGLEMSSSY 142
Query: 147 AYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFERAFARWASVIPVSFQEVEKF 206
A+F P+W T L Y + + ++ LS+ +R V E AF W+ V +F EV
Sbjct: 143 AFFQDSPKW-SDTKRNLKYMYK--SSVDVLSMDVVRKVCENAFLSWSEVSDFTFTEVGDE 199
Query: 207 ESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPNGRFHLDAAEAWSVDFDHDKSKVAV- 265
SADI+IGF+ G+HGD PFDG VL H F P +GR H D E W+ + + +
Sbjct: 200 GSADIKIGFHRGNHGDVYPFDGPGNVLAHTFPPEDGRLHFDGDENWTNNPTSLEDNFGLH 259
Query: 266 ---------------------DLESVATHEIGHVLGLGHSSVKEAVMYPSLSPRGKKVDL 304
DLE+VA HE+GH+LGL HS+ + + MYP + G + +L
Sbjct: 260 AGLLGKESNPFQRPTATTKQFDLETVALHEMGHLLGLAHSTDQNSAMYPYWA--GVRRNL 317
Query: 305 RIDDVEGVQALY 316
DDV+G+ ALY
Sbjct: 318 NQDDVDGITALY 329
>Medtr5g036080.1 | matrix metalloproteinase | HC |
chr5:15713228-15714934 | 20130731
Length = 322
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 146/267 (54%), Gaps = 24/267 (8%)
Query: 61 GSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDT 120
G +G+++LK Y FGYL SNFTD F L+SA++ +Q +L TG+LD+D
Sbjct: 71 GDIASGISDLKEYLQFFGYLNSSTLHSNFTDAFTENLQSAIIEFQTNFNLNTTGQLDQDI 130
Query: 121 ISAIVAPRCGVSDXXXXHGLHTTGHYAYFDG----KPRWLRGTPMTLTYAFSPYNMINRL 176
I PRCGV D TT + + KP W +L YAF P N +
Sbjct: 131 YKIISKPRCGVPDIINGT---TTMKNNFINKTMPFKPWWRNVENRSLAYAFHPENNV--- 184
Query: 177 SVKEIRTVFERAFARWASVIPVSFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHA 236
++++F+ AF RW++ ++F E F +DIRI F + DG G +G +
Sbjct: 185 -TDNVKSLFQDAFNRWSNATELNFIETMSFNDSDIRIAFLT--------LDGKGGTVGGS 235
Query: 237 F---SPPNGRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYP 293
+ S G +LDA E W + ++ + VDLESV H++GH+LGLGHSSV+EA+MYP
Sbjct: 236 YINSSVNVGSVYLDADEQWVLPSENVVEEDDVDLESVVMHQVGHLLGLGHSSVEEAIMYP 295
Query: 294 SLSPRGKKVDL-RIDDVEGVQALYGSN 319
+ + KK++L +DD++ +Q +YG N
Sbjct: 296 -IVLQEKKIELVNVDDLQRIQEIYGVN 321
>Medtr5g036087.1 | matrix metalloproteinase | LC |
chr5:15720721-15721951 | 20130731
Length = 353
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 153/300 (51%), Gaps = 31/300 (10%)
Query: 63 HVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTIS 122
+ G++++K + FGY +P +F D D + SA+ +YQ+ +L +TG LD +T+
Sbjct: 59 EIEGLSQIKQHLDTFGYFQ--RSPLDFDDVLDKETISAIKAYQQFFNLQVTGHLDSETLQ 116
Query: 123 AIVAPRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIR 182
++ PRCGV D + + + G + +GT LTY F P + I+ +K
Sbjct: 117 LLLLPRCGVPDMNFEYSFTDAINISLPKGNKWFPKGTK-KLTYGFHPESQISTDMIK--- 172
Query: 183 TVFERAFARWASVIPV-SFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGV---LGHAFS 238
VF AF RW+ V +F E ++ ADI+IGFY+ + D V L
Sbjct: 173 -VFRNAFTRWSQTTRVLNFSETTSYDDADIKIGFYNITYNDAVDDVVVGDSFISLKLDSK 231
Query: 239 PPNGRFHLDAAEAWSV--------DFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAV 290
+G LDA++ W + +F DLE+VA H+IGH+LGL HSS +E++
Sbjct: 232 AKSGLIRLDASKYWVLPTTYFWYWEFHQ------FDLETVAMHQIGHLLGLDHSSDEESI 285
Query: 291 MYPSLSP-RGKKVDLRIDDVEGVQALY----GSNPNFSFS-SFLQSENSYNHAVGLETSF 344
MYP++ P + +KV + + D +Q LY +NP+ S F E++++ ++ L +F
Sbjct: 286 MYPTIVPLQQRKVQITVSDNLAIQQLYTNSVKANPDSDHSGCFKLFESTFDTSLSLGFAF 345
>Medtr5g036083.1 | matrixin family protein | LC |
chr5:15716962-15718220 | 20130731
Length = 318
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 137/266 (51%), Gaps = 25/266 (9%)
Query: 58 AERGSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLD 117
++ + G++++K + + F YL F D D + SA+ +YQ+ +L +TG LD
Sbjct: 36 GKQTEEIQGLSKIKQHLYHFKYLQ-GLYLVGFDDYLDNKTISAIKAYQQFFNLQVTGHLD 94
Query: 118 KDTISAIVAPRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLS 177
+T+ I+ PRCGV D ++ +A G + +GT LTY F P + ++S
Sbjct: 95 TETLQQIMLPRCGVPDINP--DINPDFGFARAQGNKWFPKGTK-ELTYGFLPES---KIS 148
Query: 178 VKEIRTVFERAFARWASVIPV-SFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHA 236
+ ++ VF AF RW+ V F E ++ ADI+IGFY+ + E D V V
Sbjct: 149 IDKVN-VFRNAFTRWSQTTRVLKFSEATSYDDADIKIGFYNISYNSKEVIDVV--VSDFF 205
Query: 237 FSPPNGRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLS 296
+ + L+A++ W DLE+VA H+IGH+LGL HSS E++MYP++
Sbjct: 206 INLRSFTIRLEASKVW-------------DLETVAMHQIGHLLGLDHSSDVESIMYPTIV 252
Query: 297 P-RGKKVDLRIDDVEGVQALYGSNPN 321
P KKV + + D + +Q LY N
Sbjct: 253 PLHQKKVQITVSDNQAIQQLYTKQTN 278
>Medtr5g036093.1 | matrix metalloproteinase | LC |
chr5:15723305-15724418 | 20130731
Length = 314
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 146/290 (50%), Gaps = 32/290 (11%)
Query: 68 AELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIVAP 127
+++K + + FGY +P +F D D + SA+ +YQ+ +L +TG L+ +T+ P
Sbjct: 35 SQIKKHLNTFGYFR--RSPLDFDDVLDKETISAIKTYQQFFNLQVTGHLNTETLQQFSFP 92
Query: 128 RCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVFER 187
RCG+ D +G H + ++ G + +GT LTY F P NR+ + I+ VF
Sbjct: 93 RCGIPDMKYEYGFHDGSNVSFPKGNKWFPKGTK-KLTYGFLP---DNRIPIDIIK-VFRN 147
Query: 188 AFARWASVIPV-SFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGV---LGHAFSPPNGR 243
AF RW+ V +F E +E A+I+IGFY+ ++ D V L + +G
Sbjct: 148 AFTRWSQTTRVLNFSETTSYEDAEIKIGFYNINYNDAVDDVVVSDSFISLKLDSNVKSGM 207
Query: 244 FHLDAAEAWSV-------DFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLS 296
L+ +++W + D+ + DL + H+IGH+LGL HSS KE++MYP++
Sbjct: 208 LRLNGSKSWVLPTYTKFWDWQFQQ----FDLLTAVMHQIGHLLGLDHSSDKESIMYPTIL 263
Query: 297 P-RGKKVDLRIDDVEGVQALYGSNPNFSFSSFLQSENSYNHAVGLETSFS 345
P + +KV + D +Q LY S+ N+ +H GL S S
Sbjct: 264 PWQQRKVQITESDNLAIQQLYSSST---------KANANSHYSGLFASLS 304
>Medtr5g036360.1 | matrix metalloproteinase | LC |
chr5:15835981-15837316 | 20130731
Length = 360
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 134/261 (51%), Gaps = 28/261 (10%)
Query: 66 GMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIV 125
G+ ++K Y FGYL E F +T D + AL +YQ+ ++ +DT+S I+
Sbjct: 81 GVDQIKQYLSDFGYL---EQSGPFNNTLDQETVLALKTYQRYFNI------QQDTLSEIL 131
Query: 126 A----PRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEI 181
PRCGV D + L T ++ G + +GT LTY F P N I ++
Sbjct: 132 QHIALPRCGVPDRILKYNL--TNDISFPKGNQWFPKGTK-NLTYGFDPRNKIPL----DM 184
Query: 182 RTVFERAFARWASVIPV-SFQEVEKFESADIRIGFY--SGDHGDGEPFDGVLGVLGHAFS 238
VF A +W++ V +F E + ++ A+I+IGFY + D G + G ++ + +
Sbjct: 185 TNVFRTALTQWSNTTRVLNFTETKSYDDANIKIGFYNITDDDGINDVAVGFTFIVLDSTN 244
Query: 239 PPNGRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSPR 298
+G LDA + W++ +H DLE+ A H+IGH+LGL HSS +++MYP++ P
Sbjct: 245 VKSGFITLDATKYWALPTEHR----GFDLETAAMHQIGHLLGLEHSSDNKSIMYPTILPS 300
Query: 299 GKK-VDLRIDDVEGVQALYGS 318
+K V + D +Q LY S
Sbjct: 301 HQKNVQITDSDNLAIQKLYSS 321
>Medtr5g036290.1 | matrixin family protein | LC |
chr5:15818918-15820174 | 20130731
Length = 370
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/258 (32%), Positives = 126/258 (48%), Gaps = 20/258 (7%)
Query: 66 GMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISAIV 125
G+ ++K Y FGYL E F +T D + AL +YQ+ ++ + + I
Sbjct: 89 GLDQIKQYLQNFGYL---EQSGPFNNTLDQETVLALKTYQRYFNIYAGQDSLRKILQHIA 145
Query: 126 APRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIRTVF 185
PRCGV D + +T +Y G + +GT LTY F+P N I + VF
Sbjct: 146 LPRCGVPDMNFTY--DSTNDISYPKGNQWFPKGTK-NLTYGFAPKNEIPL----NVTNVF 198
Query: 186 ERAFARWASVIPV-SFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPN--- 241
+A RW+ V +F E ++ ADI+I F + + DG +D V+ V N
Sbjct: 199 RKALTRWSQTTRVLNFTETTSYDDADIKIVFNNMTYDDG-IYDVVVAVTLIKLDSANMNT 257
Query: 242 GRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSP-RGK 300
G LD + W + + +DLE+ A H+IGH+LGL HSS +++MYP++ P + K
Sbjct: 258 GLISLDITKHWVFPTEDGE----LDLETAAMHQIGHLLGLEHSSDSKSIMYPTILPSQQK 313
Query: 301 KVDLRIDDVEGVQALYGS 318
KV + D +Q LY S
Sbjct: 314 KVQITDSDNLAIQKLYSS 331
>Medtr5g036270.1 | matrixin family protein | LC |
chr5:15813229-15814623 | 20130731
Length = 339
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 134/314 (42%), Gaps = 59/314 (18%)
Query: 64 VTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTISA 123
+ G++++K + FGY + F D D + SA+ +YQ+ +L +TG L+ +T+
Sbjct: 3 IQGLSQIKKHLSTFGYFR--QFLLKFDDVLDEETISAIKTYQQFFNLQVTGNLNTETLQK 60
Query: 124 IVAPRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMIN--RLSVKEI 181
I PRCG+ D +G ++ G + +GT LTY F P + R + ++
Sbjct: 61 ISLPRCGIPDMRYEYGFDVGSDVSFPKGNKWFPKGTK-KLTYGFLPGKKFSLLRCGIPDM 119
Query: 182 R------------------------------------------TVFERAFARWASVIPV- 198
R F AF RW+ V
Sbjct: 120 RYEYGFDVGSDVSFPKGNKWFPKGTKKLTYGFLPGKKFSLDMIEGFRNAFTRWSQTTRVL 179
Query: 199 SFQEVEKFESADIRIGFYS-GDHGDGEPFDGVLGVLGHAFSP--PNGRFHLDAAEAW--- 252
+F E ++ ADI+IGFY ++ + + +G L+ ++ W
Sbjct: 180 NFSETTSYDDADIKIGFYHIYNNDIVDDVVVGDSFISRNLDSNVKSGMIRLERSKFWVSP 239
Query: 253 SVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSP-RGKKVDLRIDDVEG 311
+ + DLE+V H+IGH+LGL HSS KE++MYP + P + KKV + D +
Sbjct: 240 TTTYFKKWELQEFDLETVVMHQIGHLLGLDHSSDKESIMYPLIDPLQEKKVQITDSDNQA 299
Query: 312 VQALY----GSNPN 321
+Q LY +NPN
Sbjct: 300 IQQLYTNTAKANPN 313
>Medtr5g036310.1 | matrixin family protein | LC |
chr5:15823336-15824388 | 20130731
Length = 311
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 60/269 (22%)
Query: 59 ERGSHVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPIT-GKLD 117
++ + G+ ++K Y + FGYL + F + D Q SA+ YQ+ +L +T G L+
Sbjct: 66 QQAEVIQGLYQIKQYLYYFGYL---QQYGPFNNVLDQQTMSAIKIYQQNFNLQVTNGYLN 122
Query: 118 KDTISAIVAPRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLS 177
+T I+ PRCGV D M Y+F+
Sbjct: 123 TETSQQILLPRCGVPD---------------------------MNFEYSFTN-------- 147
Query: 178 VKEIRTVFERAFARWASVIPVSFQEVEKFESADIRIGFYSGDH-GDGEPFDGVLGVLGHA 236
+++F P E ++ ADI+I FY+ ++ + V+
Sbjct: 148 --------DKSF-------PKGNNETTSYDDADIKIRFYNINYIDGVDDVVVGDAVIKLG 192
Query: 237 FSPPNGRFHLDAAEAWSVDFDHDK---SKVAVDLESVATHEIGHVLGLGHSSVKEAVMYP 293
+ +G L A++ W + D+ DLE+ A ++IGH+LGL HS KE+VMYP
Sbjct: 193 SNVNSGLIRLIASKYWVLPTDNYMWSWQNGEFDLETAAMYQIGHLLGLDHSFDKESVMYP 252
Query: 294 SLSP-RGKKVDLRIDDVEGVQALYGSNPN 321
++ P + +K+ + D + +Q +Y SN N
Sbjct: 253 AILPLQQRKLHITDSDNQAIQQIY-SNAN 280
>Medtr5g036110.1 | matrixin family protein | LC |
chr5:15729479-15731910 | 20130731
Length = 356
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 69/256 (26%)
Query: 63 HVTGMAELKSYFHRFGYLTLPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDTIS 122
+ G++++K +F FGY P+ NF D D + SA+ +YQ+ +L +TG L+ +T+
Sbjct: 53 EIQGLSQIKKHFDTFGYF--PQFLLNFDDVLDEETISAIKTYQQFFNLQVTGHLNTETL- 109
Query: 123 AIVAPRCGVSDXXXXHGLHTTGHYAYFDGKPRWLRGTPMTLTYAFSPYNMINRLSVKEIR 182
+ + G ++L +MI
Sbjct: 110 -----------------------------QKNLVTGKKISL-------DMIEG------- 126
Query: 183 TVFERAFARWASVIPV-SFQEVEKFESADIRIGFYSGDHGDGEPFDGVLGVLGHAFSPPN 241
F AF W+ V +F E ++ ADI+IGFY H ++
Sbjct: 127 --FRNAFTCWSQTTRVLNFSETTSYDDADIKIGFY------------------HIYNNDV 166
Query: 242 GRFHLDAAEAWSVDFDHDKSKVAVDLESVATHEIGHVLGLGHSSVKEAVMYPSLSP-RGK 300
+ S + D ++ + + + I ++LGL HSS KE++MYP + P K
Sbjct: 167 VDDVVVGDSFISRNLDSNEKSGMNSIWRLLSC-IKYLLGLDHSSDKESIMYPLIDPLHEK 225
Query: 301 KVDLRIDDVEGVQALY 316
KV + D + +Q LY
Sbjct: 226 KVQITDSDNQAIQQLY 241
>Medtr2g079050.1 | peptidoglycan-binding domain protein | HC |
chr2:33100028-33105546 | 20130731
Length = 539
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 64 VTGMAELKSYFHRFGYLT---LPETPSNFTDTFDTQLESALLSYQKRLSLPITGKLDKDT 120
+ G++++K + FGY L F D D + SA+ +YQ+ +L +TG L+ +T
Sbjct: 3 IQGLSQIKKHLSTFGYFRQFLL-----KFDDVLDEETISAIKTYQQFFNLQVTGNLNTET 57
Query: 121 ISAIVAPRCGVSDXXXXHGLHTTGHYAYFDG----KPRWLRGTPMTLTYAFSPYNMINRL 176
+ I PRCG+ D +G ++ G KP ++ P+T A SP N +
Sbjct: 58 LQKISLPRCGIPDMRYEYGFDVGSDVSFPKGNKCNKPPYV---PITPPKAPSPSNHAPNV 114
Query: 177 SVKEIRT 183
+ +T
Sbjct: 115 PITPPKT 121