Miyakogusa Predicted Gene

Lj2g3v2001390.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2001390.1 Non Characterized Hit- tr|C6TIQ9|C6TIQ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.30008
PE,82.69,0,PS_decarb: phosphatidylserine
decarboxylase,Phosphatidylserine decarboxylase;
PS_Dcarbxylase,Phospha,CUFF.38319.1
         (437 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g012880.1 | phosphatidylserine decarboxylase | HC | chr5:3...   734   0.0  
Medtr5g012880.2 | phosphatidylserine decarboxylase | HC | chr5:3...   642   0.0  
Medtr2g008190.2 | phosphatidylserine decarboxylase | HC | chr2:1...    69   1e-11
Medtr2g008190.1 | phosphatidylserine decarboxylase | HC | chr2:1...    68   1e-11

>Medtr5g012880.1 | phosphatidylserine decarboxylase | HC |
           chr5:3971286-3963496 | 20130731
          Length = 440

 Score =  734 bits (1894), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/440 (81%), Positives = 390/440 (88%), Gaps = 3/440 (0%)

Query: 1   MKYRVPHRFPVFPHHFRSLTHT-KPFTSFTRRFLTPQARASFNGGTGNSQGDS-FLLPGA 58
           MK RVPHRFP+  +H R   HT K FTSF + F  PQ  +S NG  GNS+GDS +LLPGA
Sbjct: 1   MKPRVPHRFPILSYHTRFHNHTHKSFTSFIKNFPKPQPPSSVNGANGNSKGDSSYLLPGA 60

Query: 59  TVATILMLGVLHARRLYDDKKTEEMREKGIELEFQPDAKAAFFRLLPLRSISRCWGCLTN 118
           TVATILMLG LHARR+YDDKK E+ +EKGIE+EFQPD KA+F   LPLRSISRCWG LT+
Sbjct: 61  TVATILMLGALHARRMYDDKKIEKRQEKGIEVEFQPDVKASFMSFLPLRSISRCWGQLTS 120

Query: 119 VEIPVWLRPHVYKAWARAFHSNLEEAALPLDKYASLRDFFVRALKEGSRPIDADPQCLVS 178
           +EIP WLRPHVYKAWARAFHSNLEEAALPLDKY SLR+FFVRALKEGSRPID DPQCLVS
Sbjct: 121 MEIPAWLRPHVYKAWARAFHSNLEEAALPLDKYTSLREFFVRALKEGSRPIDTDPQCLVS 180

Query: 179 PVDGTVLRFGELRGAGAMIEQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIK-TEK 237
           PVDG +LRFGEL+GAGAMIEQVKGFSY VFSLLGAS  LPTTA  N+QEE  ESIK TEK
Sbjct: 181 PVDGKILRFGELKGAGAMIEQVKGFSYPVFSLLGASSLLPTTAHGNVQEETSESIKPTEK 240

Query: 238 GKKSWWSVSLASPKVWDPRSSCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRL 297
            KKSWW VSLASPKVWDP SSCPK+GLFYCVIYLKPGDY+R+HSPADW+ILVRRHF+G L
Sbjct: 241 SKKSWWRVSLASPKVWDPTSSCPKKGLFYCVIYLKPGDYNRIHSPADWNILVRRHFSGHL 300

Query: 298 YPVNERATRTIRNLYTENERVILEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKK 357
           YPVNERATRTIRNLY ENERV+LEG+WQEGFMALAA+GATNIGSIELFIEPELQTNKP K
Sbjct: 301 YPVNERATRTIRNLYIENERVVLEGVWQEGFMALAAVGATNIGSIELFIEPELQTNKPIK 360

Query: 358 KLLHSERPEERVYDCDGVGRILKKGNEVGAFNMGSTVVLVFQAPISKLNHEGDSSQDFNF 417
           K L+SE PEERVYDC+GVG++LKKG+E+GAFNMGSTVVLVFQAPISKL HEGDSSQ+FNF
Sbjct: 361 KSLNSEPPEERVYDCEGVGKVLKKGDELGAFNMGSTVVLVFQAPISKLLHEGDSSQEFNF 420

Query: 418 CVKHGDRIRVGEALGRWHSS 437
            VK GDRI+VGEALGRWHSS
Sbjct: 421 NVKCGDRIKVGEALGRWHSS 440


>Medtr5g012880.2 | phosphatidylserine decarboxylase | HC |
           chr5:3971271-3964024 | 20130731
          Length = 392

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/388 (80%), Positives = 341/388 (87%), Gaps = 3/388 (0%)

Query: 1   MKYRVPHRFPVFPHHFRSLTHT-KPFTSFTRRFLTPQARASFNGGTGNSQGDS-FLLPGA 58
           MK RVPHRFP+  +H R   HT K FTSF + F  PQ  +S NG  GNS+GDS +LLPGA
Sbjct: 1   MKPRVPHRFPILSYHTRFHNHTHKSFTSFIKNFPKPQPPSSVNGANGNSKGDSSYLLPGA 60

Query: 59  TVATILMLGVLHARRLYDDKKTEEMREKGIELEFQPDAKAAFFRLLPLRSISRCWGCLTN 118
           TVATILMLG LHARR+YDDKK E+ +EKGIE+EFQPD KA+F   LPLRSISRCWG LT+
Sbjct: 61  TVATILMLGALHARRMYDDKKIEKRQEKGIEVEFQPDVKASFMSFLPLRSISRCWGQLTS 120

Query: 119 VEIPVWLRPHVYKAWARAFHSNLEEAALPLDKYASLRDFFVRALKEGSRPIDADPQCLVS 178
           +EIP WLRPHVYKAWARAFHSNLEEAALPLDKY SLR+FFVRALKEGSRPID DPQCLVS
Sbjct: 121 MEIPAWLRPHVYKAWARAFHSNLEEAALPLDKYTSLREFFVRALKEGSRPIDTDPQCLVS 180

Query: 179 PVDGTVLRFGELRGAGAMIEQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIK-TEK 237
           PVDG +LRFGEL+GAGAMIEQVKGFSY VFSLLGAS  LPTTA  N+QEE  ESIK TEK
Sbjct: 181 PVDGKILRFGELKGAGAMIEQVKGFSYPVFSLLGASSLLPTTAHGNVQEETSESIKPTEK 240

Query: 238 GKKSWWSVSLASPKVWDPRSSCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRL 297
            KKSWW VSLASPKVWDP SSCPK+GLFYCVIYLKPGDY+R+HSPADW+ILVRRHF+G L
Sbjct: 241 SKKSWWRVSLASPKVWDPTSSCPKKGLFYCVIYLKPGDYNRIHSPADWNILVRRHFSGHL 300

Query: 298 YPVNERATRTIRNLYTENERVILEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKK 357
           YPVNERATRTIRNLY ENERV+LEG+WQEGFMALAA+GATNIGSIELFIEPELQTNKP K
Sbjct: 301 YPVNERATRTIRNLYIENERVVLEGVWQEGFMALAAVGATNIGSIELFIEPELQTNKPIK 360

Query: 358 KLLHSERPEERVYDCDGVGRILKKGNEV 385
           K L+SE PEERVYDC+GVG++LKKG+EV
Sbjct: 361 KSLNSEPPEERVYDCEGVGKVLKKGDEV 388


>Medtr2g008190.2 | phosphatidylserine decarboxylase | HC |
           chr2:1343926-1335278 | 20130731
          Length = 654

 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 139/367 (37%), Gaps = 93/367 (25%)

Query: 68  VLHARRLYDDKKTEEMREKGIELEFQPDAKAAFFRLLPLRSISRCWGCLTNVEIPVWLRP 127
           VL  R +Y  K    + + G++   Q  ++    ++  L S +         +IP ++  
Sbjct: 368 VLSMRAIYQSKIGLGLMDIGVKELLQSISEKQGAKMDSLESAA---------DIPKFVES 418

Query: 128 HVYKAWARAFHSNLEEAALPLDKYASLRDFFVRALKEGSRPIDA--DPQCLVSPVDGTVL 185
             YK        +L E   PL+ + +  +FF+R LK GSRPI +       V   D  ++
Sbjct: 419 --YKG-----QISLAEVKYPLEHFKTFNEFFIRELKPGSRPIASAEHDNIAVCGADCRLM 471

Query: 186 RFGELRGAGAMIEQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIKTEKGKKSWWSV 245
            F  +  +      +KG  +SV  LLG         D  +                    
Sbjct: 472 AFKSVDESSRF--WIKGRKFSVQGLLGKEMCSSAFVDGTL-------------------- 509

Query: 246 SLASPKVWDPRSSCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRLYPVNERAT 305
                                 +  L P DYHR H P   +I    +  G L+ VN  A 
Sbjct: 510 ---------------------VIFRLAPQDYHRFHLPVSGTIEQFVNIPGSLFTVNPIAV 548

Query: 306 RT-IRNLYTENERVI-LEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKKKLLHSE 363
            +   N++TEN RV+ +      G +A  AIGAT +GSI          N  KKK     
Sbjct: 549 NSKYCNVFTENTRVVSIISTVDFGKVAFVAIGATMVGSI----------NFTKKK----- 593

Query: 364 RPEERVYDCDGVGRILKKGNEVGAFNM-GSTVVLVFQAPISKLNHE--GDSSQDFNFCVK 420
                       G  +KKG+E G F   GSTV+ VF+     ++ +   +S++     V 
Sbjct: 594 ------------GDYVKKGDEFGYFAFGGSTVICVFEKGSIAIDEDLLSNSTRSLETLVT 641

Query: 421 HGDRIRV 427
            G R+ V
Sbjct: 642 MGMRLGV 648


>Medtr2g008190.1 | phosphatidylserine decarboxylase | HC |
           chr2:1343926-1335278 | 20130731
          Length = 631

 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 139/367 (37%), Gaps = 93/367 (25%)

Query: 68  VLHARRLYDDKKTEEMREKGIELEFQPDAKAAFFRLLPLRSISRCWGCLTNVEIPVWLRP 127
           VL  R +Y  K    + + G++   Q  ++    ++  L S +         +IP ++  
Sbjct: 345 VLSMRAIYQSKIGLGLMDIGVKELLQSISEKQGAKMDSLESAA---------DIPKFVES 395

Query: 128 HVYKAWARAFHSNLEEAALPLDKYASLRDFFVRALKEGSRPIDA--DPQCLVSPVDGTVL 185
             YK        +L E   PL+ + +  +FF+R LK GSRPI +       V   D  ++
Sbjct: 396 --YKG-----QISLAEVKYPLEHFKTFNEFFIRELKPGSRPIASAEHDNIAVCGADCRLM 448

Query: 186 RFGELRGAGAMIEQVKGFSYSVFSLLGASPSLPTTADDNMQEEHRESIKTEKGKKSWWSV 245
            F  +  +      +KG  +SV  LLG         D  +                    
Sbjct: 449 AFKSVDESSRF--WIKGRKFSVQGLLGKEMCSSAFVDGTL-------------------- 486

Query: 246 SLASPKVWDPRSSCPKRGLFYCVIYLKPGDYHRMHSPADWSILVRRHFAGRLYPVNERAT 305
                                 +  L P DYHR H P   +I    +  G L+ VN  A 
Sbjct: 487 ---------------------VIFRLAPQDYHRFHLPVSGTIEQFVNIPGSLFTVNPIAV 525

Query: 306 RT-IRNLYTENERVI-LEGLWQEGFMALAAIGATNIGSIELFIEPELQTNKPKKKLLHSE 363
            +   N++TEN RV+ +      G +A  AIGAT +GSI          N  KKK     
Sbjct: 526 NSKYCNVFTENTRVVSIISTVDFGKVAFVAIGATMVGSI----------NFTKKK----- 570

Query: 364 RPEERVYDCDGVGRILKKGNEVGAFNM-GSTVVLVFQAPISKLNHE--GDSSQDFNFCVK 420
                       G  +KKG+E G F   GSTV+ VF+     ++ +   +S++     V 
Sbjct: 571 ------------GDYVKKGDEFGYFAFGGSTVICVFEKGSIAIDEDLLSNSTRSLETLVT 618

Query: 421 HGDRIRV 427
            G R+ V
Sbjct: 619 MGMRLGV 625