Miyakogusa Predicted Gene

Lj2g3v2000290.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2000290.3 tr|Q8R4W0|Q8R4W0_CRIGR Acyl-CoA oxidase
(Fragment) OS=Cricetulus griseus PE=2 SV=1,50,2e-19,Acyl-CoA
dehydrogenase C-terminal domain-like,Acyl-CoA dehydrogenase/oxidase
C-terminal; ACYL-COA OX,CUFF.38551.3
         (389 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   692   0.0  
Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   672   0.0  
Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like prote...   528   e-150
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035...   169   3e-42
Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622...   119   4e-27

>Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr5:4011592-4004454 | 20130731
          Length = 664

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/389 (85%), Positives = 347/389 (89%)

Query: 1   MKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ 60
           MKFG+ AYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQL+YGTMVYVRQ
Sbjct: 227 MKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLIYGTMVYVRQ 286

Query: 61  AIVSDASIALSRAVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAFRF 120
           AIV+DAS ALSRAVCIATRYSAVRRQFGS  GG E+QVIDYKTQQARLFPLLAS YAFRF
Sbjct: 287 AIVADASTALSRAVCIATRYSAVRRQFGSQKGGPETQVIDYKTQQARLFPLLASAYAFRF 346

Query: 121 VSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLCGGHGYLN 180
           VSEWL WLYTDVTQRLQA DFSTLPEAHACTAGLKSLTTS  ADGIEECRKLCGGHGYL 
Sbjct: 347 VSEWLKWLYTDVTQRLQANDFSTLPEAHACTAGLKSLTTSATADGIEECRKLCGGHGYLC 406

Query: 181 SSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQ 240
           SSGLPELFAVYVPACTYEGDNTVLLLQVAR+LVKTISQLGSG KP GTTAYL RVEQLMQ
Sbjct: 407 SSGLPELFAVYVPACTYEGDNTVLLLQVARYLVKTISQLGSGKKPVGTTAYLGRVEQLMQ 466

Query: 241 YHSDVKKAEDWLKPNXXXXXXXXXXXXXXXXCAQNLSKFTNPEEGFQELTADLVEAATAH 300
           Y SDVK+AEDWLKPN                 AQN+SKF+NPEEGFQEL+ DLVEAA AH
Sbjct: 467 YQSDVKRAEDWLKPNVVIEAFEARAARMSVAVAQNISKFSNPEEGFQELSVDLVEAAAAH 526

Query: 301 CQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIYALSLLHKHLGDFLSAGCINPLQGSLAN 360
           CQLI+VSKFI+KLQ++IPGKGVKQQLEVLCSIYAL LLHKHLGDFLS G I   QGSLAN
Sbjct: 527 CQLIVVSKFIEKLQQNIPGKGVKQQLEVLCSIYALFLLHKHLGDFLSTGSITEEQGSLAN 586

Query: 361 EQLRSLYSQVRPNAIALVDAFNYTDHYLG 389
           EQLRSLYSQVRPNAI LVDAFNYTDH LG
Sbjct: 587 EQLRSLYSQVRPNAITLVDAFNYTDHLLG 615


>Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 664

 Score =  672 bits (1734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/388 (82%), Positives = 343/388 (88%)

Query: 1   MKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ 60
           MKFG+GAYNTMDNGVLRF+HVRIPR+QMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ
Sbjct: 227 MKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ 286

Query: 61  AIVSDASIALSRAVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAFRF 120
            IVSDAS A+SRAVCIA RYSAVRRQFG +NG LESQVIDYKTQQARLFPLLAS YAFRF
Sbjct: 287 TIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLLASAYAFRF 346

Query: 121 VSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLCGGHGYLN 180
           V EWL WLYTDV +RLQA DFSTLPEAHACTAGLKSLTTS  +DGIEECRKLCGGHGYL 
Sbjct: 347 VGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEECRKLCGGHGYLC 406

Query: 181 SSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQ 240
           SSGLPELFAVYVP CTYEGDN VLLLQVARHL+K IS+LGSG KP GTTAY+ RVEQL++
Sbjct: 407 SSGLPELFAVYVPTCTYEGDNIVLLLQVARHLMKVISRLGSGKKPVGTTAYMGRVEQLLE 466

Query: 241 YHSDVKKAEDWLKPNXXXXXXXXXXXXXXXXCAQNLSKFTNPEEGFQELTADLVEAATAH 300
             SDV+KAEDWL PN                CA+NL+KF+NPEEGFQEL ADLV+AA AH
Sbjct: 467 ARSDVQKAEDWLNPNTVLRAFEARAARMSVACAKNLTKFSNPEEGFQELLADLVDAARAH 526

Query: 301 CQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIYALSLLHKHLGDFLSAGCINPLQGSLAN 360
           CQLI+VSKFI+KLQ+DIPGKGVK+QLE+LC+IYAL  LHKHLGDFLS GCI P QGSLAN
Sbjct: 527 CQLIVVSKFIEKLQQDIPGKGVKRQLEILCNIYALFHLHKHLGDFLSTGCITPKQGSLAN 586

Query: 361 EQLRSLYSQVRPNAIALVDAFNYTDHYL 388
           +QLRSLYSQVRPNAIALVDAFNYTDHYL
Sbjct: 587 DQLRSLYSQVRPNAIALVDAFNYTDHYL 614


>Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 534

 Score =  528 bits (1360), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 250/308 (81%), Positives = 268/308 (87%)

Query: 1   MKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ 60
           MKFG+GAYNTMDNGVLRF+HVRIPR+QMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ
Sbjct: 227 MKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQVTREGKYVQSNVPRQLVYGTMVYVRQ 286

Query: 61  AIVSDASIALSRAVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAFRF 120
            IVSDAS A+SRAVCIA RYSAVRRQFG +NG LESQVIDYKTQQARLFPLLAS YAFRF
Sbjct: 287 TIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSLESQVIDYKTQQARLFPLLASAYAFRF 346

Query: 121 VSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLCGGHGYLN 180
           V EWL WLYTDV +RLQA DFSTLPEAHACTAGLKSLTTS  +DGIEECRKLCGGHGYL 
Sbjct: 347 VGEWLKWLYTDVMKRLQANDFSTLPEAHACTAGLKSLTTSATSDGIEECRKLCGGHGYLC 406

Query: 181 SSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQ 240
           SSGLPELFAVYVP CTYEGDN VLLLQVARHL+K IS+LGSG KP GTTAY+ RVEQL++
Sbjct: 407 SSGLPELFAVYVPTCTYEGDNIVLLLQVARHLMKVISRLGSGKKPVGTTAYMGRVEQLLE 466

Query: 241 YHSDVKKAEDWLKPNXXXXXXXXXXXXXXXXCAQNLSKFTNPEEGFQELTADLVEAATAH 300
             SDV+KAEDWL PN                CA+NL+KF+NPEEGFQEL ADLV+AA AH
Sbjct: 467 ARSDVQKAEDWLNPNTVLRAFEARAARMSVACAKNLTKFSNPEEGFQELLADLVDAARAH 526

Query: 301 CQLIIVSK 308
           CQLI+VSK
Sbjct: 527 CQLIVVSK 534


>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
           chr8:38035172-38040185 | 20130731
          Length = 689

 Score =  169 bits (429), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 189/392 (48%), Gaps = 21/392 (5%)

Query: 9   NTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS--NVPRQL--VYGTMVYVRQAIVS 64
           N +DNG LRF  VRIPR+ +L R   V+R+GKY  +  +V ++     G +V  R  +  
Sbjct: 282 NGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSTLPSVNKRFGATLGELVGGRVGLAY 341

Query: 65  DASIALSRAVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAFRFVSEW 124
            +   L  +  IA RYS +R+QFG  +   E  ++DY++ Q +L P+LASTYAF F +  
Sbjct: 342 SSVSVLKVSATIAIRYSLLRQQFGPRDQP-EVTILDYQSHQHKLMPMLASTYAFHFATTN 400

Query: 125 LSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLCGGHGYLNSSGL 184
           L   Y    Q  ++ D   + + HA +AGLK+  TS  A  +  CR+ CGGHGY   +  
Sbjct: 401 LVEKYA---QMKKSHDEELVADVHALSAGLKAYVTSYTAKSLSICREACGGHGYAAVNRF 457

Query: 185 PELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQYHSD 244
             L   +    T+EGDNTVLL QVA  L+K   +   G     T  YL   + +  Y S 
Sbjct: 458 GSLRNDHDIFQTFEGDNTVLLQQVAADLLKQYQRKFQGGTLAVTWNYLR--DSMNTYLSQ 515

Query: 245 VK------KAEDWLK-PNXXXXXXXXXXXXXXXXCAQNLSKFTNPEEGF---QELTADLV 294
                   + ED L+ P                  A  L K + P   F         L+
Sbjct: 516 PNPVTARWEGEDHLRDPKFQLDAFRYRTSRLLHSVAVRLRKHSKPLGDFGAWNRCLNHLL 575

Query: 295 EAATAHCQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIYALSLLHKHLGDFLSAGCINPL 354
             A +H + +I++KFI+ +Q   P    +  L+++C +YAL  +   +G + +   + P 
Sbjct: 576 TLAESHIESVILAKFIEAVQS-CPDASAQAALKLVCDLYALDRIWNDIGTYRNVDYVAPN 634

Query: 355 QGSLANEQLRSLYSQVRPNAIALVDAFNYTDH 386
           +    ++    L  QVR  A  LVDAF+  DH
Sbjct: 635 KAKAIHKLSEYLSFQVRNIAKELVDAFDLPDH 666


>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
           chr4:30622603-30615873 | 20130731
          Length = 678

 Score =  119 bits (299), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 186/400 (46%), Gaps = 42/400 (10%)

Query: 9   NTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKY---VQSNVPRQLVYGTMVYVRQAIVSD 65
           N +DNG + FD+VRIPR  +L  ++ V+  G+Y   +++   R   +   +   +  ++ 
Sbjct: 283 NGVDNGRIWFDNVRIPRENLLNSMADVSPSGEYLSAIKNTDQRFAAFLAPLTSGRVTIAV 342

Query: 66  ASIALSR-AVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAFRFVSEW 124
           +S+ +S+ ++ IA RY+  RR F     G E  ++DY + Q RL PLLA  YA  F +  
Sbjct: 343 SSVYISKISLAIAIRYALTRRAFSITPNGPEVLLLDYPSHQQRLLPLLAKIYAMSFSAIE 402

Query: 125 LSWLYTDVTQRLQAGDFSTLPEA----HACTAGLKSLTTSIAADGIEECRKLCGGHGYLN 180
           L  LY + T           PE+    H  ++  K+  T      ++ECR+ CGG G   
Sbjct: 403 LKKLYVNRT-----------PESNKAIHIVSSAYKATFTWNNMRTLQECREACGGQGVKT 451

Query: 181 SSGLPELFAVYVPACTYEGDNTVLLLQVARHLVKTISQLGSGNKP---------GGTTAY 231
            + + +    Y    T+EGDN VL+ Q+++ L+       + NKP          G+   
Sbjct: 452 ENRIGQFKGEYDVHSTFEGDNNVLMQQISKALLAEYIACQTKNKPFKGLGLEHMNGSCPV 511

Query: 232 LARVEQLMQYHSDVKKAEDWLKPNXXXXXXXXXXXXXXXXCAQNLSKFTNPEEGF---QE 288
           +    QL    S +K +E   + +                 +++ S+  + E  F    +
Sbjct: 512 IP--SQLTS--STIKSSE--FQIDLFHLRERDLLKRFAAEVSEHQSQGNSKESAFILSYQ 565

Query: 289 LTADLVEAATAHCQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIYALSLLHKHLGDFLSA 348
           L  DL     A  +  I+  F++  +  +P   +K  L +L S+YAL  + +    FL  
Sbjct: 566 LAEDL---GRAFSERAILKTFMEA-ESALPAGSLKDVLGLLRSLYALISVDEDAA-FLRY 620

Query: 349 GCINPLQGSLANEQLRSLYSQVRPNAIALVDAFNYTDHYL 388
           G ++    S   +++  L +++RP+A+ALV++F   D +L
Sbjct: 621 GYLSTENASAVRKEVPKLCAELRPHALALVNSFGIPDAFL 660