Miyakogusa Predicted Gene

Lj2g3v2000290.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v2000290.1 tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase
OS=Medicago truncatula GN=MTR_5g012920 PE=3 SV=1,92.93,0,ACYL-COA
OXIDASE,Acyl-CoA oxidase; ELECTRON TRANSPORT OXIDOREDUCTASE,NULL;
Acyl-CoA_dh_M,Acyl-CoA ox,CUFF.38551.1
         (305 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   602   e-172
Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like prote...   571   e-163
Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like prote...   570   e-163
Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC | chr8:38035...   151   7e-37
Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC | chr4:30622...   150   1e-36
Medtr7g068850.1 | acyl-CoA dehydrogenase | HC | chr7:25296388-25...    52   6e-07

>Medtr5g012920.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr5:4011592-4004454 | 20130731
          Length = 664

 Score =  602 bits (1552), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 281/304 (92%), Positives = 297/304 (97%)

Query: 1   MKIIWAGSRSEFELSDRISRLVASDPAFRKDDRTTLGRKDLFKNTLRKTAYAWKRILELR 60
           MKI+WAGSR EFELSDRISRLVASDPAFRKD+RT+L RK+LFKNTLRKTAYAWKRI+ELR
Sbjct: 21  MKIVWAGSRQEFELSDRISRLVASDPAFRKDNRTSLDRKELFKNTLRKTAYAWKRIIELR 80

Query: 61  LNEKEAAKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTEL 120
           LNE+EA+KLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQ+KWLPLAYKMQIIGCYAQTEL
Sbjct: 81  LNEQEASKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQEKWLPLAYKMQIIGCYAQTEL 140

Query: 121 GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQG 180
           GHGSNVQGLETTATFDPKTDEF+IHSPTLTSSKWWPGGLGKISTHA+VYARLIT+GQ+QG
Sbjct: 141 GHGSNVQGLETTATFDPKTDEFIIHSPTLTSSKWWPGGLGKISTHAIVYARLITEGQDQG 200

Query: 181 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQ 240
           VHGFIVQLRSLDDHLPLPGITVGDIGMKFG+ AYNTMDNGVLRFDHVRIPRNQMLMRVSQ
Sbjct: 201 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGNAAYNTMDNGVLRFDHVRIPRNQMLMRVSQ 260

Query: 241 VTREGKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGGL 300
           VTREGKYVQSNVPRQL+YGTMVYVRQAIV+DAS ALSRAVCIATRYSAVRRQFGS  GG 
Sbjct: 261 VTREGKYVQSNVPRQLIYGTMVYVRQAIVADASTALSRAVCIATRYSAVRRQFGSQKGGP 320

Query: 301 ESQV 304
           E+QV
Sbjct: 321 ETQV 324


>Medtr4g100640.2 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 534

 Score =  571 bits (1471), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 267/304 (87%), Positives = 287/304 (94%)

Query: 1   MKIIWAGSRSEFELSDRISRLVASDPAFRKDDRTTLGRKDLFKNTLRKTAYAWKRILELR 60
           MKI+WAGS    E+SDR+SRLVASDPAFRKD R  LGRK+LFK+TL+K AYAWKRI+ELR
Sbjct: 21  MKIVWAGSAHALEVSDRMSRLVASDPAFRKDHRPMLGRKELFKSTLKKAAYAWKRIIELR 80

Query: 61  LNEKEAAKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTEL 120
           L E+EA+ LRSFVDEPAFTDLHWGMF+PAIKGQGT+EQQQKWLPLA +MQIIGCYAQTEL
Sbjct: 81  LTEEEASMLRSFVDEPAFTDLHWGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTEL 140

Query: 121 GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQG 180
           GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGK+STHAVVYARLITDG++ G
Sbjct: 141 GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGRDHG 200

Query: 181 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQ 240
           VHGFIVQLRSLDDHLPLPGITVGDIGMKFG+GAYNTMDNGVLRF+HVRIPR+QMLMRVSQ
Sbjct: 201 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQ 260

Query: 241 VTREGKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGGL 300
           VTREGKYVQSNVPRQLVYGTMVYVRQ IVSDAS A+SRAVCIA RYSAVRRQFG +NG L
Sbjct: 261 VTREGKYVQSNVPRQLVYGTMVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSL 320

Query: 301 ESQV 304
           ESQV
Sbjct: 321 ESQV 324


>Medtr4g100640.1 | peroxisomal acyl-coenzyme A oxidase-like protein
           | HC | chr4:41511892-41519080 | 20130731
          Length = 664

 Score =  570 bits (1468), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 267/304 (87%), Positives = 287/304 (94%)

Query: 1   MKIIWAGSRSEFELSDRISRLVASDPAFRKDDRTTLGRKDLFKNTLRKTAYAWKRILELR 60
           MKI+WAGS    E+SDR+SRLVASDPAFRKD R  LGRK+LFK+TL+K AYAWKRI+ELR
Sbjct: 21  MKIVWAGSAHALEVSDRMSRLVASDPAFRKDHRPMLGRKELFKSTLKKAAYAWKRIIELR 80

Query: 61  LNEKEAAKLRSFVDEPAFTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTEL 120
           L E+EA+ LRSFVDEPAFTDLHWGMF+PAIKGQGT+EQQQKWLPLA +MQIIGCYAQTEL
Sbjct: 81  LTEEEASMLRSFVDEPAFTDLHWGMFIPAIKGQGTEEQQQKWLPLAQRMQIIGCYAQTEL 140

Query: 121 GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQG 180
           GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGK+STHAVVYARLITDG++ G
Sbjct: 141 GHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKVSTHAVVYARLITDGRDHG 200

Query: 181 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQ 240
           VHGFIVQLRSLDDHLPLPGITVGDIGMKFG+GAYNTMDNGVLRF+HVRIPR+QMLMRVSQ
Sbjct: 201 VHGFIVQLRSLDDHLPLPGITVGDIGMKFGNGAYNTMDNGVLRFEHVRIPRDQMLMRVSQ 260

Query: 241 VTREGKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGGL 300
           VTREGKYVQSNVPRQLVYGTMVYVRQ IVSDAS A+SRAVCIA RYSAVRRQFG +NG L
Sbjct: 261 VTREGKYVQSNVPRQLVYGTMVYVRQTIVSDASTAMSRAVCIAARYSAVRRQFGGNNGSL 320

Query: 301 ESQV 304
           ESQV
Sbjct: 321 ESQV 324


>Medtr8g090375.1 | peroxisomal acyl-CoA oxidase | HC |
           chr8:38035172-38040185 | 20130731
          Length = 689

 Score =  151 bits (382), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 13/211 (6%)

Query: 94  GTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSK 153
           GT + + K+      +   GC+A TEL HGSNVQGL+T ATFDP TDEF+I +P   + K
Sbjct: 158 GTQKHKDKYYDGIDNLDYPGCFAMTELHHGSNVQGLQTLATFDPITDEFIIDTPNDGAIK 217

Query: 154 WWPGGLGKISTHAVVYARLITDG------QEQGVHGFIVQLRSLDDHLPLPGITVGDIGM 207
           WW G        A V+ARL           + GVH FIV +R +  H  LPGI + D G 
Sbjct: 218 WWIGNAAVHGKFATVFARLKLPNYDAKGVSDMGVHAFIVPIRDMKTHQTLPGIEIHDCGH 277

Query: 208 KFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQS--NVPRQL--VYGTMVY 263
           K G    N +DNG LRF  VRIPR+ +L R   V+R+GKY  +  +V ++     G +V 
Sbjct: 278 KVG---LNGVDNGALRFRSVRIPRDNLLNRFGDVSRDGKYTSTLPSVNKRFGATLGELVG 334

Query: 264 VRQAIVSDASIALSRAVCIATRYSAVRRQFG 294
            R  +   +   L  +  IA RYS +R+QFG
Sbjct: 335 GRVGLAYSSVSVLKVSATIAIRYSLLRQQFG 365


>Medtr4g079290.1 | peroxisomal acyl-CoA oxidase | HC |
           chr4:30622603-30615873 | 20130731
          Length = 678

 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 128/223 (57%), Gaps = 11/223 (4%)

Query: 83  WGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEF 142
           WG    A+K  GT     KWL       I GC+A +ELGHGSNV+G+ET  T+DP + EF
Sbjct: 158 WG---GAVKFLGTKRHHDKWLRATENYDIKGCFAMSELGHGSNVRGIETVTTYDPISGEF 214

Query: 143 VIHSPTLTSSKWWPGGLGKISTHAVVYARLITDGQEQGVHGFIVQLRSLDDHLPLPGITV 202
           VI++P  ++ K+W GG    +TH +V+++L  +G  QGVH FI Q+R  D ++  P I +
Sbjct: 215 VINTPCESAQKYWIGGAANHATHTIVFSQLNINGSNQGVHAFIAQIRDSDGNI-CPNIRI 273

Query: 203 GDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKY---VQSNVPRQLVYG 259
            + G K G    N +DNG + FD+VRIPR  +L  ++ V+  G+Y   +++   R   + 
Sbjct: 274 AECGHKIG---LNGVDNGRIWFDNVRIPRENLLNSMADVSPSGEYLSAIKNTDQRFAAFL 330

Query: 260 TMVYVRQAIVSDASIALSR-AVCIATRYSAVRRQFGSHNGGLE 301
             +   +  ++ +S+ +S+ ++ IA RY+  RR F     G E
Sbjct: 331 APLTSGRVTIAVSSVYISKISLAIAIRYALTRRAFSITPNGPE 373


>Medtr7g068850.1 | acyl-CoA dehydrogenase | HC |
           chr7:25296388-25301382 | 20130731
          Length = 433

 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 99/222 (44%), Gaps = 42/222 (18%)

Query: 78  FTDLHWGMFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDP 137
           F  +H  + +  I   G++ Q+QK+LP   +++ I C+A TE  +GS+   L+TTAT   
Sbjct: 131 FILVHSSLAMLTIALCGSEAQKQKYLPSLAQLKTIACWALTEPDYGSDASALKTTAT--- 187

Query: 138 KTDEFVIHSPTLTSSKWWPGGLGKISTHA---VVYARLITDGQEQGVHGFIVQLRSLDDH 194
           K +   I    L   K W G     ST A   V++AR  +  Q   ++G+IV+  +    
Sbjct: 188 KVEGGWI----LEGQKRWIGN----STFADLLVIFARNTSTNQ---INGYIVKKDA---- 232

Query: 195 LPLPGITVGDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTREGKYVQSNVPR 254
              PG+TV  I  K G      + NG +    V +P    +  V+      K        
Sbjct: 233 ---PGLTVTKIENKIG---LRIVQNGDIVMRKVFVPDEDRIEGVNSFQDTNK-------- 278

Query: 255 QLVYGTMVYVRQAIVSDASIALSRAVC-IATRYSAVRRQFGS 295
                 ++ V + +V+   I +S  +  +  RY   R+QFG+
Sbjct: 279 ------VLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGA 314