Miyakogusa Predicted Gene

Lj2g3v1989240.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1989240.1 tr|O23590|O23590_ARATH Thioesterase like protein
OS=Arabidopsis thaliana GN=dl4775c PE=4
SV=1,66.67,0.0000005,alpha/beta-Hydrolases,NULL;
Palm_thioest,Palmitoyl protein thioesterase; PALMITOYL-PROTEIN
THIOESTER,CUFF.38317.1
         (249 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g013020.1 | palmitoyl protein thioesterase family protein ...   406   e-114
Medtr7g007760.1 | palmitoyl protein thioesterase family protein ...   324   5e-89

>Medtr5g013020.1 | palmitoyl protein thioesterase family protein |
           HC | chr5:4076625-4071524 | 20130731
          Length = 327

 Score =  406 bits (1044), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 191/231 (82%), Positives = 208/231 (90%)

Query: 19  HSIPFIVLHGIGDQCSNHGVKRFTEELSTYSGAKGYCIEIGSGSWDSWFLPLQEQTEIVC 78
           HSIPFIVLHGIGDQCSN GVK FT+EL TYSG KG+C+E+G+GSWDSWF+PL+EQT++VC
Sbjct: 26  HSIPFIVLHGIGDQCSNRGVKSFTQELITYSGVKGFCVEVGNGSWDSWFMPLKEQTDVVC 85

Query: 79  XXXXXXXXXXXGYNIVGLSQGNLIGRGVVEFCEGGPPVKNLISLGGPHAGTASVPLCGRG 138
                      GYNIVGLSQGNLIGRGVVEFCEGGPPVKN ISL GPHAGTASVPLCG G
Sbjct: 86  QKVKKMKELKGGYNIVGLSQGNLIGRGVVEFCEGGPPVKNFISLAGPHAGTASVPLCGTG 145

Query: 139 IFCVLADNLIKGGVYNAYVQEHLAPSGYLKLPNAIPEYLENCRFLPKLNNEIPDQRNSTY 198
           IFCVLADNLIKG VY+ Y+QEHLAPSGYLKLPNAIP+YLENCR+LPKLNNE P QRNSTY
Sbjct: 146 IFCVLADNLIKGEVYSNYIQEHLAPSGYLKLPNAIPKYLENCRYLPKLNNEKPGQRNSTY 205

Query: 199 KERFSNLENLVLIMFEQDTVLIPKETAWFGYYPDGSFKPVLPPQETELYTE 249
           KERFS+LENLVLIMFEQDTVLIP+ET+WFGYYPDG FKPVLPPQET+LYTE
Sbjct: 206 KERFSSLENLVLIMFEQDTVLIPRETSWFGYYPDGFFKPVLPPQETKLYTE 256


>Medtr7g007760.1 | palmitoyl protein thioesterase family protein |
           HC | chr7:1644876-1653485 | 20130731
          Length = 313

 Score =  324 bits (830), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 150/231 (64%), Positives = 183/231 (79%)

Query: 19  HSIPFIVLHGIGDQCSNHGVKRFTEELSTYSGAKGYCIEIGSGSWDSWFLPLQEQTEIVC 78
            S+PFIVLHGIGDQC N GV  F + LS +SG++GYC+EIG+G W SW  PL +QT I C
Sbjct: 27  QSLPFIVLHGIGDQCKNGGVTNFVKLLSDWSGSQGYCLEIGNGMWTSWTKPLLKQTAIAC 86

Query: 79  XXXXXXXXXXXGYNIVGLSQGNLIGRGVVEFCEGGPPVKNLISLGGPHAGTASVPLCGRG 138
                      GYNIVGLSQGN+IGRG++EFC+GGPPVKN ISLGGPHAGTAS+PLCG  
Sbjct: 87  EKVKKMSELNQGYNIVGLSQGNVIGRGIIEFCDGGPPVKNFISLGGPHAGTASIPLCGSE 146

Query: 139 IFCVLADNLIKGGVYNAYVQEHLAPSGYLKLPNAIPEYLENCRFLPKLNNEIPDQRNSTY 198
             C L D++IK GVY++ VQ  LAP+GY+K+P  I  YL+ C+FLPKLNNEI ++RNSTY
Sbjct: 147 KVCTLIDSVIKFGVYSSIVQNSLAPTGYVKMPIDIAGYLKGCKFLPKLNNEIINKRNSTY 206

Query: 199 KERFSNLENLVLIMFEQDTVLIPKETAWFGYYPDGSFKPVLPPQETELYTE 249
            +RF++LENLVLIMF+ DT+LIPKETAWFG+YPDG+   VLPPQ+T+LYTE
Sbjct: 207 SKRFASLENLVLIMFDHDTILIPKETAWFGFYPDGALHSVLPPQQTKLYTE 257