Miyakogusa Predicted Gene
- Lj2g3v1989050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1989050.1 Non Characterized Hit- tr|I3SNU5|I3SNU5_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,4e-18,GATA,Zinc finger, GATA-type; UCH37_bd,NULL;
GATA_ZN_FINGER_2,Zinc finger, GATA-type; no description,,CUFF.38294.1
(540 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g013370.1 | GATA transcription factor-like protein | HC | ... 693 0.0
Medtr4g099410.1 | GATA transcription factor-like protein | HC | ... 686 0.0
Medtr5g013370.2 | GATA transcription factor-like protein | HC | ... 572 e-163
Medtr1g045040.1 | GATA zinc finger protein | LC | chr1:16972742-... 57 5e-08
Medtr5g007600.1 | GATA type zinc finger transcription factor fam... 54 3e-07
Medtr1g089830.1 | GATA zinc finger protein | LC | chr1:40211167-... 54 3e-07
Medtr5g021340.1 | GATA type zinc finger transcription factor fam... 54 4e-07
Medtr8g089130.1 | GATA zinc finger protein | LC | chr8:37019408-... 54 5e-07
Medtr4g058910.1 | GATA type zinc finger transcription factor fam... 52 2e-06
Medtr8g076340.1 | GATA type zinc finger transcription factor fam... 52 2e-06
Medtr1g046680.1 | GATA type zinc finger transcription factor fam... 51 3e-06
Medtr1g046680.2 | GATA type zinc finger transcription factor fam... 51 3e-06
Medtr2g094600.1 | GATA type zinc finger transcription factor fam... 51 3e-06
Medtr1g116010.1 | GATA type zinc finger transcription factor fam... 49 1e-05
>Medtr5g013370.1 | GATA transcription factor-like protein | HC |
chr5:4229715-4234914 | 20130731
Length = 499
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/522 (68%), Positives = 393/522 (75%), Gaps = 47/522 (9%)
Query: 1 MGKQGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHARPETDDYEDQ 60
MGKQGPC+HCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTL NYTPLHAR ETDD++DQ
Sbjct: 1 MGKQGPCHHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARAETDDFDDQ 60
Query: 61 KVFRVKSISLNKNKEGKPLKRKQNHDNLVSGGVAPYYNQGFPKVVDEDTXXXXXXXXXXX 120
K R+KSISLNKNKE LKRKQNH N+VSGG+A YNQGF K DED
Sbjct: 61 KASRMKSISLNKNKEVNLLKRKQNHYNVVSGGLASDYNQGFHKAFDEDMSNRSSSGSALS 120
Query: 121 XXXXCAQFGGTEASDLTGPAQSVVWETM--VPSKKRTCVGRPK-PSSVEKLTQDLCTILH 177
CAQFGGT+ASDLTGP+QSVVW+T VPSKKRTCVGR K PSSVEKLT+DLCTILH
Sbjct: 121 NSESCAQFGGTDASDLTGPSQSVVWDTTPTVPSKKRTCVGRAKQPSSVEKLTKDLCTILH 180
Query: 178 EQQSYFSASSEEDLLFESETPMVSVEIGHGSMLFRHPSCIARDEESEASSLSVDNKQCPI 237
EQQS FS SS+ DLL+ESE PMVSVEIGHGS+L RHPS +ARDEESEASSLS DN P+
Sbjct: 181 EQQSCFSESSDGDLLYESEAPMVSVEIGHGSVLIRHPSYVARDEESEASSLSFDNGLYPM 240
Query: 238 SEAYSYSGAMLVHNSSSPMNFSSQGVEKVRNSADHGMHQEQLKSDKSQLERVQMLGNHDS 297
S+AYSYSGA+L KSDKSQLERVQ+LGNHDS
Sbjct: 241 SDAYSYSGAVL-------------------------------KSDKSQLERVQILGNHDS 269
Query: 298 PLCLIDLNDVVNYEEFLRILTNEEQQQLLKFLPVVDTAKLPDSLKAMFDSSQFKENLTYF 357
PLCL+DLNDVVNYEEF R L+ EEQQQLLKFLPVVDTAKLPD LK MF SSQFKENLT F
Sbjct: 270 PLCLVDLNDVVNYEEFTRNLSYEEQQQLLKFLPVVDTAKLPDGLKVMFSSSQFKENLTNF 329
Query: 358 QQLLSEGVFDISLSGAKPEDCKTLKRFALSNLSKLKWVEHYHFLKRCKRRXXXXXXXXXX 417
QQLL++G FDISL KPEDC+TLKR+AL+ LSK KWVEHYH KRCK R
Sbjct: 330 QQLLAKGAFDISLPEVKPEDCETLKRYALNELSKSKWVEHYHN-KRCKSRAEKSDVPGSS 388
Query: 418 XXXXXNVANIKRVRDSWNQNFPELKPIMRNPKRVITKAGCEGKEVVEDGASNSPKSLFPL 477
NVAN+KR+RDS NQNFPE+K IMR+PKR+ITK S +PKSLFPL
Sbjct: 389 GIASTNVANVKRMRDSRNQNFPEMKTIMRSPKRIITK------------ISYNPKSLFPL 436
Query: 478 PRAASSLFLDSLNFAEESSDQDLLLDVPSNSSFPQAELLCPT 519
P ASS LDS NF EESSDQDLLL+VPSN+SFPQAELL PT
Sbjct: 437 PPDASSHLLDSFNFVEESSDQDLLLEVPSNNSFPQAELLHPT 478
>Medtr4g099410.1 | GATA transcription factor-like protein | HC |
chr4:41253755-41249364 | 20130731
Length = 547
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/515 (68%), Positives = 395/515 (76%), Gaps = 7/515 (1%)
Query: 8 YHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHARPETDDYEDQKVFRVKS 67
+H G TPLWRNGPPEKPILCNACGSRWRTKGTL NYTPLHAR + D+EDQ+V R+K
Sbjct: 16 FHLG---TPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARTDPVDFEDQRVSRLKI 72
Query: 68 ISLNKNKEGKPLKRKQNHDNL--VSGGVAPYYNQGFPKVVDEDTXXXXXXXXXXXXXXXC 125
+SLNKNKE K +KRKQN+DN SG P YNQGF K VDEDT C
Sbjct: 73 VSLNKNKEVKLVKRKQNYDNAYAASGWFTPEYNQGFQKAVDEDTSNRSSSGSAISNSESC 132
Query: 126 AQFGGTEASDLTGPAQSVVWETMVPSKKRTCVGRPKPSSVEKLTQDLCTILHEQQ-SYFS 184
QFGGT+ASDLTGP+QSVVW+T PSKKRTC GR K SSVEKLTQDLCTILHEQQ S FS
Sbjct: 133 VQFGGTDASDLTGPSQSVVWDTAAPSKKRTCAGRLKHSSVEKLTQDLCTILHEQQQSCFS 192
Query: 185 ASSEEDLLFESETPMVSVEIGHGSMLFRHPSCIARDEESEASSLSVDNKQCPISEAYSYS 244
ASSEE+LL++SETPMVSVEIGHGSML RHPS IARDEESEASSLSVDNKQC ++EAYS
Sbjct: 193 ASSEEELLYDSETPMVSVEIGHGSMLIRHPSSIARDEESEASSLSVDNKQCLMNEAYSCY 252
Query: 245 GAMLVHNSSSPMNFSSQGVEKVRNSADHGMHQEQLKSDKSQLERVQMLGNHDSPLCLIDL 304
G++ + + MNFSSQGV KVRNSA + QEQL DKSQLE++++LGNHDS LC IDL
Sbjct: 253 GSIPRLSDYTGMNFSSQGVAKVRNSAGPRLQQEQLVWDKSQLEKLEVLGNHDSSLCSIDL 312
Query: 305 NDVVNYEEFLRILTNEEQQQLLKFLPVVDTAKLPDSLKAMFDSSQFKENLTYFQQLLSEG 364
NDVVNYE F R LTNEEQQQLLK+LPV+DTAK PDS+K MFDS QFKE LTYFQ+LL EG
Sbjct: 313 NDVVNYEAFSRNLTNEEQQQLLKYLPVIDTAKFPDSIKIMFDSFQFKEELTYFQKLLEEG 372
Query: 365 VFDISLSGAKPEDCKTLKRFALSNLSKLKWVEHYHFLKRCKRRXXXXXXXXXXXXXXXNV 424
VFDISL PEDCKT KR ALSNLSK K VEHY+FLK+ + NV
Sbjct: 373 VFDISLLRGDPEDCKTSKRLALSNLSKSKCVEHYNFLKKGGNKDGKRNGMESPAMASSNV 432
Query: 425 ANIKRVRDSWNQNFPELKPIMRNPKRVITKAGCEGKEVVEDGASNSPKSLFPLPRAASSL 484
AN+KR+R S NQNFPELK MR+PKRVI KAG GKE V DG+S SPKSLF PR
Sbjct: 433 ANVKRLRVSQNQNFPELKTTMRSPKRVIVKAGTGGKEAV-DGSSISPKSLFAFPRNGGLH 491
Query: 485 FLDSLNFAEESSDQDLLLDVPSNSSFPQAELLCPT 519
LDSLNF +ESSDQDLLL+ PSN+SFPQAELL P+
Sbjct: 492 MLDSLNFVDESSDQDLLLEFPSNNSFPQAELLLPS 526
>Medtr5g013370.2 | GATA transcription factor-like protein | HC |
chr5:4229722-4234914 | 20130731
Length = 382
Score = 572 bits (1473), Expect = e-163, Method: Compositional matrix adjust.
Identities = 289/402 (71%), Positives = 314/402 (78%), Gaps = 34/402 (8%)
Query: 1 MGKQGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHARPETDDYEDQ 60
MGKQGPC+HCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTL NYTPLHAR ETDD++DQ
Sbjct: 1 MGKQGPCHHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLANYTPLHARAETDDFDDQ 60
Query: 61 KVFRVKSISLNKNKEGKPLKRKQNHDNLVSGGVAPYYNQGFPKVVDEDTXXXXXXXXXXX 120
K R+KSISLNKNKE LKRKQNH N+VSGG+A YNQGF K DED
Sbjct: 61 KASRMKSISLNKNKEVNLLKRKQNHYNVVSGGLASDYNQGFHKAFDEDMSNRSSSGSALS 120
Query: 121 XXXXCAQFGGTEASDLTGPAQSVVWETM--VPSKKRTCVGRPK-PSSVEKLTQDLCTILH 177
CAQFGGT+ASDLTGP+QSVVW+T VPSKKRTCVGR K PSSVEKLT+DLCTILH
Sbjct: 121 NSESCAQFGGTDASDLTGPSQSVVWDTTPTVPSKKRTCVGRAKQPSSVEKLTKDLCTILH 180
Query: 178 EQQSYFSASSEEDLLFESETPMVSVEIGHGSMLFRHPSCIARDEESEASSLSVDNKQCPI 237
EQQS FS SS+ DLL+ESE PMVSVEIGHGS+L RHPS +ARDEESEASSLS DN P+
Sbjct: 181 EQQSCFSESSDGDLLYESEAPMVSVEIGHGSVLIRHPSYVARDEESEASSLSFDNGLYPM 240
Query: 238 SEAYSYSGAMLVHNSSSPMNFSSQGVEKVRNSADHGMHQEQLKSDKSQLERVQMLGNHDS 297
S+AYSYSGA+L KSDKSQLERVQ+LGNHDS
Sbjct: 241 SDAYSYSGAVL-------------------------------KSDKSQLERVQILGNHDS 269
Query: 298 PLCLIDLNDVVNYEEFLRILTNEEQQQLLKFLPVVDTAKLPDSLKAMFDSSQFKENLTYF 357
PLCL+DLNDVVNYEEF R L+ EEQQQLLKFLPVVDTAKLPD LK MF SSQFKENLT F
Sbjct: 270 PLCLVDLNDVVNYEEFTRNLSYEEQQQLLKFLPVVDTAKLPDGLKVMFSSSQFKENLTNF 329
Query: 358 QQLLSEGVFDISLSGAKPEDCKTLKRFALSNLSKLKWVEHYH 399
QQLL++G FDISL KPEDC+TLKR+AL+ LSK KWVEHYH
Sbjct: 330 QQLLAKGAFDISLPEVKPEDCETLKRYALNELSKSKWVEHYH 371
>Medtr1g045040.1 | GATA zinc finger protein | LC |
chr1:16972742-16973241 | 20130731
Length = 134
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 29/40 (72%)
Query: 12 VTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHAR 51
+T T LWR GP EKP+LCNACG ++ KGTL NY P A+
Sbjct: 3 LTETKLWRKGPYEKPVLCNACGLHFKAKGTLENYIPKTAQ 42
>Medtr5g007600.1 | GATA type zinc finger transcription factor family
protein | LC | chr5:1423316-1424761 | 20130731
Length = 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 1 MGKQGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTP 47
+G+Q C+HCG +TPLWR GP LCNACG R+R+ + Y P
Sbjct: 155 IGRQ--CHHCGADNTPLWRTGPGGPKTLCNACGVRYRSGRLVPEYRP 199
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHA 50
C+HCG +TP WR GP LCNACG R+R+ + Y P ++
Sbjct: 261 CHHCGADNTPQWRVGPDGPKTLCNACGVRYRSGRLVPEYRPANS 304
>Medtr1g089830.1 | GATA zinc finger protein | LC |
chr1:40211167-40209509 | 20130731
Length = 145
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 13 TSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHAR 51
T T +WR GP E PILCNACG ++ KGTL NY P A+
Sbjct: 4 TETKVWRKGPYETPILCNACGLHFKAKGTLENYLPKIAQ 42
>Medtr5g021340.1 | GATA type zinc finger transcription factor family
protein | HC | chr5:8235968-8237757 | 20130731
Length = 390
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTP 47
C HCGVT TP WR+GP LCNACG R+++ L Y P
Sbjct: 302 CSHCGVTKTPQWRSGPLGAKTLCNACGVRFKSGRLLPEYRP 342
>Medtr8g089130.1 | GATA zinc finger protein | LC |
chr8:37019408-37020007 | 20130731
Length = 158
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 14 STPLWRNGPPEKPILCNACGSRWRTKGTLVNYT 46
+TP+WR GP EKP+LCNACG+R+R G L ++
Sbjct: 6 ATPVWRQGPEEKPVLCNACGTRYRNGGNLEEHS 38
>Medtr4g058910.1 | GATA type zinc finger transcription factor family
protein | HC | chr4:21699022-21702492 | 20130731
Length = 402
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 23/41 (56%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTP 47
C HC VT TP WR GP LCNACG R+R+ Y P
Sbjct: 316 CTHCEVTETPQWREGPKGPKTLCNACGVRYRSGRLFPEYRP 356
>Medtr8g076340.1 | GATA type zinc finger transcription factor family
protein | HC | chr8:32335878-32334397 | 20130731
Length = 291
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTP 47
C HCGV TP WR GP LCNACG R+++ L Y P
Sbjct: 220 CSHCGVQKTPQWRTGPGGPKTLCNACGVRYKSGRLLPEYRP 260
>Medtr1g046680.1 | GATA type zinc finger transcription factor family
protein | HC | chr1:17602830-17601607 | 20130731
Length = 244
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHA 50
C+HCGV TP WR GP LCNACG R+++ + Y P ++
Sbjct: 174 CHHCGVDDTPQWRAGPNGPKTLCNACGVRYKSGRLVPEYRPANS 217
>Medtr1g046680.2 | GATA type zinc finger transcription factor family
protein | HC | chr1:17602830-17601607 | 20130731
Length = 244
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHA 50
C+HCGV TP WR GP LCNACG R+++ + Y P ++
Sbjct: 174 CHHCGVDDTPQWRAGPNGPKTLCNACGVRYKSGRLVPEYRPANS 217
>Medtr2g094600.1 | GATA type zinc finger transcription factor family
protein | HC | chr2:40382738-40376743 | 20130731
Length = 312
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 26/47 (55%)
Query: 4 QGPCYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHA 50
Q C HC VT TP WR GP LCNACG R+R+ Y P ++
Sbjct: 215 QRKCTHCEVTETPQWREGPNGPKTLCNACGVRYRSGRLYPEYRPANS 261
>Medtr1g116010.1 | GATA type zinc finger transcription factor family
protein | LC | chr1:52421000-52422477 | 20130731
Length = 246
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 7 CYHCGVTSTPLWRNGPPEKPILCNACGSRWRTKGTLVNYTPLHA---RPETDDYEDQKVF 63
C HC T TP WR GP LCNACG R+++ Y P + P+ +K+
Sbjct: 166 CTHCEATKTPQWRTGPEGPKTLCNACGVRYKSGRLCPEYRPAASSTFSPDLHSNSHKKIL 225
Query: 64 RVKSISLNKNK 74
++ + NK
Sbjct: 226 EMRVMRRKDNK 236