Miyakogusa Predicted Gene

Lj2g3v1988890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988890.1 Non Characterized Hit- tr|I1J9P9|I1J9P9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,82.46,0,SUBFAMILY NOT
NAMED,NULL; DOM-3 RELATED,NULL; RAI1,RAI1-like; seg,NULL,CUFF.38278.1
         (516 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g013580.1 | Dom3z-like protein | HC | chr5:4336920-4342897...   730   0.0  

>Medtr5g013580.1 | Dom3z-like protein | HC | chr5:4336920-4342897 |
           20130731
          Length = 512

 Score =  730 bits (1884), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/512 (73%), Positives = 398/512 (77%)

Query: 1   MDFTEKDLFGEDSDNEKDGTHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MDFT KDLFGEDSDN+KDGTH                                       
Sbjct: 1   MDFTGKDLFGEDSDNDKDGTHSSSSSSSSSAASSSSSSSSSAASSSKGSADSSSDTGSGA 60

Query: 61  XXXXXDDDEENGDVVDSXXXXXXXXXXXXEDKDLFTSDDEDFSKTLDKSSLLVPVLPVAT 120
                 DDEENGDVVDS            +D+DLF  D+ED+ KTL KS   +PVLP   
Sbjct: 61  SSGGGGDDEENGDVVDSSNRVDSHHDDDHDDRDLFGDDNEDYCKTLAKSPYPIPVLPPIR 120

Query: 121 RNTNNPXXXXXXXXXWQPGHQNDRGAGILPRPGPYPQRQNFGYGNRFQNGRHDERFVSEL 180
            NTNNP         WQ G  NDRGAGILPRPGPYPQRQNFGYGNRFQNG  DERFVSE+
Sbjct: 121 NNTNNPGRGGGGRGRWQQGQHNDRGAGILPRPGPYPQRQNFGYGNRFQNGHRDERFVSEM 180

Query: 181 KLTKSEETLSRKCIAFQEPCEIGCYSRVEGGEVYFDDRSLRLFKRHITEDIGADLNEGYD 240
           KL+KSEETLSRK IAFQEPCE+ CYSR EGGEVYFDDRSLRLFKRHITEDIGADLNEGYD
Sbjct: 181 KLSKSEETLSRKVIAFQEPCELACYSRAEGGEVYFDDRSLRLFKRHITEDIGADLNEGYD 240

Query: 241 TFIPKKDLGSEGFGDLLGCIRDRNIPLQNIHFVTFRNNLNKILATAYIRHEPWEMGVHKR 300
           T+IPKKDLGSEG+GDLL CIRD+ I LQNIHFVT+RNNLNKILATAYIRHEPWEMGVHKR
Sbjct: 241 TYIPKKDLGSEGYGDLLACIRDKKIHLQNIHFVTYRNNLNKILATAYIRHEPWEMGVHKR 300

Query: 301 NGVVYLDVHKLPERPQSDLDRRRCYTGYCFESLATEDPTRADGEGIHHVDANVEFCSVIK 360
           NGVVYLDVHKLPERPQSDLDRRRCY GY FESLATEDP RADGE IH VDANVEFCSVIK
Sbjct: 301 NGVVYLDVHKLPERPQSDLDRRRCYLGYSFESLATEDPKRADGEPIHDVDANVEFCSVIK 360

Query: 361 TKLGAHRILMGAEMDCCDSTNDGKRFYVELKSSFELNYHTXXXXXXXXXXXXWIQSFLAG 420
           TKLGAHRILMGAEMDCCD+T DGKRFYVELK+S+ELNYH             WIQSFLAG
Sbjct: 361 TKLGAHRILMGAEMDCCDTTTDGKRFYVELKTSYELNYHNEEKFEREKLLKFWIQSFLAG 420

Query: 421 VPFIVIGFRDDKGRLVRTERLRTKDITQRVKLKNYWQGGVCLAFADEVLCWLYGTVKENE 480
           VP+I IGFRDD GRLVRTE LRTKDITQR+K+K YWQGGVCLAFADEVLCWLYGTVKENE
Sbjct: 421 VPYICIGFRDDAGRLVRTEMLRTKDITQRIKMKGYWQGGVCLAFADEVLCWLYGTVKENE 480

Query: 481 DYILQYAPPSNRLELLQAQSCPDVITSHLELL 512
           DYILQ+APP NRLELLQA SCPDVITSHLELL
Sbjct: 481 DYILQFAPPFNRLELLQAHSCPDVITSHLELL 512