Miyakogusa Predicted Gene

Lj2g3v1988870.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988870.1 Non Characterized Hit- tr|I3SBI0|I3SBI0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.91,2.94273e-44,L37a: ribosomal protein L37a,Ribosomal protein
L37ae; 60S RIBOSOMAL PROTEIN L37A,NULL; Ribosomal_L37,CUFF.38286.1
         (92 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0199s0040.1 | 60S ribosomal protein L37a-2 | LC | scaffold0...   185   7e-48
Medtr8g007485.1 | 60S ribosomal protein L37a-2 | HC | chr8:15704...   183   4e-47
Medtr4g103340.1 | 60S ribosomal protein L37a-2 | HC | chr4:42698...   183   4e-47
Medtr4g099160.1 | 60S ribosomal protein L37a-2 | HC | chr4:41070...   183   4e-47
Medtr4g103340.2 | 60S ribosomal protein L37a-2 | HC | chr4:42697...   143   3e-35

>Medtr0199s0040.1 | 60S ribosomal protein L37a-2 | LC |
           scaffold0199:12346-16101 | 20130731
          Length = 173

 Score =  185 bits (470), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 91/92 (98%), Positives = 91/92 (98%)

Query: 1   MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
           MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 82  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 141

Query: 61  GKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 92
           GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 
Sbjct: 142 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 173


>Medtr8g007485.1 | 60S ribosomal protein L37a-2 | HC |
          chr8:1570482-1572532 | 20130731
          Length = 92

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>Medtr4g103340.1 | 60S ribosomal protein L37a-2 | HC |
          chr4:42698010-42696336 | 20130731
          Length = 92

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>Medtr4g099160.1 | 60S ribosomal protein L37a-2 | HC |
          chr4:41070752-41073670 | 20130731
          Length = 92

 Score =  183 bits (464), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
          GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91


>Medtr4g103340.2 | 60S ribosomal protein L37a-2 | HC |
          chr4:42697936-42696403 | 20130731
          Length = 72

 Score =  143 bits (361), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 71/72 (98%), Positives = 71/72 (98%)

Query: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
          MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60

Query: 61 GKVKAGGAYTLN 72
          GKVKAGGAYTL 
Sbjct: 61 GKVKAGGAYTLK 72