Miyakogusa Predicted Gene
- Lj2g3v1988870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1988870.1 Non Characterized Hit- tr|I3SBI0|I3SBI0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=4
SV=1,98.91,2.94273e-44,L37a: ribosomal protein L37a,Ribosomal protein
L37ae; 60S RIBOSOMAL PROTEIN L37A,NULL; Ribosomal_L37,CUFF.38286.1
(92 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr0199s0040.1 | 60S ribosomal protein L37a-2 | LC | scaffold0... 185 7e-48
Medtr8g007485.1 | 60S ribosomal protein L37a-2 | HC | chr8:15704... 183 4e-47
Medtr4g103340.1 | 60S ribosomal protein L37a-2 | HC | chr4:42698... 183 4e-47
Medtr4g099160.1 | 60S ribosomal protein L37a-2 | HC | chr4:41070... 183 4e-47
Medtr4g103340.2 | 60S ribosomal protein L37a-2 | HC | chr4:42697... 143 3e-35
>Medtr0199s0040.1 | 60S ribosomal protein L37a-2 | LC |
scaffold0199:12346-16101 | 20130731
Length = 173
Score = 185 bits (470), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/92 (98%), Positives = 91/92 (98%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 82 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 141
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 92
GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 142 GKVKAGGAYTLNTASAVTVRSTIRRLREQTES 173
>Medtr8g007485.1 | 60S ribosomal protein L37a-2 | HC |
chr8:1570482-1572532 | 20130731
Length = 92
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
>Medtr4g103340.1 | 60S ribosomal protein L37a-2 | HC |
chr4:42698010-42696336 | 20130731
Length = 92
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
>Medtr4g099160.1 | 60S ribosomal protein L37a-2 | HC |
chr4:41070752-41073670 | 20130731
Length = 92
Score = 183 bits (464), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/91 (100%), Positives = 91/91 (100%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
Query: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
GKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Sbjct: 61 GKVKAGGAYTLNTASAVTVRSTIRRLREQTE 91
>Medtr4g103340.2 | 60S ribosomal protein L37a-2 | HC |
chr4:42697936-42696403 | 20130731
Length = 72
Score = 143 bits (361), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 71/72 (98%), Positives = 71/72 (98%)
Query: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC
Sbjct: 1 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKYAVKRKAVGIWGCKDC 60
Query: 61 GKVKAGGAYTLN 72
GKVKAGGAYTL
Sbjct: 61 GKVKAGGAYTLK 72