Miyakogusa Predicted Gene

Lj2g3v1988760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1988760.1 tr|A9SJC1|A9SJC1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165246,25,8e-18,
,CUFF.38273.1
         (357 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g099070.1 | electron carrier/iron ion-binding protein, put...   423   e-118
Medtr4g099070.2 | electron carrier/iron ion-binding protein, put...   418   e-117
Medtr4g071110.1 | zinc finger, LRP1 type protein | LC | chr4:267...    51   1e-06

>Medtr4g099070.1 | electron carrier/iron ion-binding protein,
           putative | HC | chr4:41023331-41015147 | 20130731
          Length = 359

 Score =  423 bits (1087), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/343 (63%), Positives = 270/343 (78%), Gaps = 7/343 (2%)

Query: 16  MALNPPKSQRGLNKPKCKQCGNVARSRCPYEQCKRCCSRNENPCHIHVKTNSTLPDKLPS 75
           M+ + PKSQRG NKPKCKQCGNVARSRCPYEQCK CCS+N+NPC IHV   ST+PD  PS
Sbjct: 23  MSSSAPKSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKASTIPDNTPS 82

Query: 76  SFGAPLDQQSLETSQSATASRVASLRQLSNNFAQFNNLNISLRSKKPLTIKDAATINEWR 135
           S  APLD++S E   S +A R ASLRQLSN+FAQFNNL++SLRSKKPLT KDAA INEWR
Sbjct: 83  SGAAPLDRKSFEPPPSISAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWR 142

Query: 136 LSKLKEYKERNIDVENETFDRYMQNVELLEEVLSVKSVENNMTSASESPTTSMENNNEMM 195
            SKLKEYKERN+D ENE FDRYMQNV+LLEEVLSVK  + +++SASE+  TS E N+E+M
Sbjct: 143 FSKLKEYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTE-NSEVM 201

Query: 196 TTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRLEKFAVDDDI-NKPIDEEPSEVSKRPKS 254
             GLKL LRSNS RSD +R+RI++ VD GL +L K AVD D  N+ IDE     +KR ++
Sbjct: 202 IPGLKLQLRSNSTRSDGVRIRIKKTVDDGLKKL-KCAVDGDSNNEEIDEVSESSNKRKRT 260

Query: 255 CSDERLSAISDLIDKINKARSEEDLNSCLEMKSQLFNLEVDSGSIEILDHETPENEIAKS 314
              E+LSAISDL+DKINKARSEEDL SCLE+K QLFN + DS  ++  D+E  +N+ A+ 
Sbjct: 261 ---EKLSAISDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTAEG 317

Query: 315 ESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLSSLEQHVEEL 357
           ++  A+ELDYS PKLV ++E+DQ+TLN +D++ SSLE +VE+L
Sbjct: 318 DAVPAKELDYSLPKLVGSSEIDQETLNIIDKHFSSLE-YVEQL 359


>Medtr4g099070.2 | electron carrier/iron ion-binding protein,
           putative | HC | chr4:41023327-41015147 | 20130731
          Length = 358

 Score =  418 bits (1074), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/343 (63%), Positives = 269/343 (78%), Gaps = 8/343 (2%)

Query: 16  MALNPPKSQRGLNKPKCKQCGNVARSRCPYEQCKRCCSRNENPCHIHVKTNSTLPDKLPS 75
           M+ + PKSQRG NKPKCKQCGNVARSRCPYEQCK CCS+N+NPC IHV   ST+PD  PS
Sbjct: 23  MSSSAPKSQRGQNKPKCKQCGNVARSRCPYEQCKSCCSKNQNPCPIHVLKASTIPDNTPS 82

Query: 76  SFGAPLDQQSLETSQSATASRVASLRQLSNNFAQFNNLNISLRSKKPLTIKDAATINEWR 135
           S  APLD++S E   S  A R ASLRQLSN+FAQFNNL++SLRSKKPLT KDAA INEWR
Sbjct: 83  SGAAPLDRKSFEPPPS-IAGRAASLRQLSNSFAQFNNLHLSLRSKKPLTRKDAAAINEWR 141

Query: 136 LSKLKEYKERNIDVENETFDRYMQNVELLEEVLSVKSVENNMTSASESPTTSMENNNEMM 195
            SKLKEYKERN+D ENE FDRYMQNV+LLEEVLSVK  + +++SASE+  TS E N+E+M
Sbjct: 142 FSKLKEYKERNVDAENEAFDRYMQNVDLLEEVLSVKQSDEDVSSASEANQTSTE-NSEVM 200

Query: 196 TTGLKLHLRSNSFRSDSLRMRIQQFVDKGLHRLEKFAVDDDI-NKPIDEEPSEVSKRPKS 254
             GLKL LRSNS RSD +R+RI++ VD GL +L K AVD D  N+ IDE     +KR ++
Sbjct: 201 IPGLKLQLRSNSTRSDGVRIRIKKTVDDGLKKL-KCAVDGDSNNEEIDEVSESSNKRKRT 259

Query: 255 CSDERLSAISDLIDKINKARSEEDLNSCLEMKSQLFNLEVDSGSIEILDHETPENEIAKS 314
              E+LSAISDL+DKINKARSEEDL SCLE+K QLFN + DS  ++  D+E  +N+ A+ 
Sbjct: 260 ---EKLSAISDLLDKINKARSEEDLQSCLEVKLQLFNSDEDSAMVQHTDNEMHQNQTAEG 316

Query: 315 ESTSAEELDYSSPKLVVTAEVDQDTLNTVDRYLSSLEQHVEEL 357
           ++  A+ELDYS PKLV ++E+DQ+TLN +D++ SSLE +VE+L
Sbjct: 317 DAVPAKELDYSLPKLVGSSEIDQETLNIIDKHFSSLE-YVEQL 358


>Medtr4g071110.1 | zinc finger, LRP1 type protein | LC |
          chr4:26795870-26794245 | 20130731
          Length = 264

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 29/61 (47%)

Query: 27 LNKPKCKQCGNVARSRCPYEQCKRCCSRNENPCHIHVKTNSTLPDKLPSSFGAPLDQQSL 86
          L  PKC+ CGN A+  C Y +C+ CC      CH H+++     D+       P DQ  L
Sbjct: 12 LKGPKCQDCGNQAKKDCAYSRCRSCCKNKGFNCHTHIRSTWIPADRRRHRMDHPSDQHHL 71

Query: 87 E 87
           
Sbjct: 72 H 72