Miyakogusa Predicted Gene
- Lj2g3v1984990.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1984990.1 Non Characterized Hit- tr|I3SG06|I3SG06_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.09,0,Adap_comp_sub,Clathrin adaptor, mu subunit, C-terminal;
no description,NULL; MHD,Clathrin adaptor, m,CUFF.38233.1
(438 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g014330.1 | clathrin-adaptor medium chain AP-2 | HC | chr5... 845 0.0
Medtr5g014330.2 | clathrin-adaptor medium chain AP-2 | HC | chr5... 762 0.0
Medtr8g069565.1 | clathrin assembly protein AP47, putative | HC ... 354 8e-98
Medtr5g033500.1 | clathrin assembly protein AP47, putative | HC ... 351 1e-96
Medtr5g033500.2 | clathrin assembly protein AP47, putative | HC ... 246 3e-65
Medtr3g112190.1 | AP-4 complex subunit mu-1 | HC | chr3:52543098... 239 5e-63
Medtr5g066050.1 | clathrin-adaptor medium chain AP-2 | HC | chr5... 227 2e-59
Medtr5g066050.2 | clathrin-adaptor medium chain AP-2 | HC | chr5... 226 3e-59
Medtr7g111870.3 | clathrin adaptor complexes medium subunit fami... 159 7e-39
Medtr7g111870.1 | clathrin adaptor complexes medium subunit fami... 159 7e-39
Medtr7g111870.2 | clathrin adaptor complexes medium subunit fami... 134 2e-31
>Medtr5g014330.1 | clathrin-adaptor medium chain AP-2 | HC |
chr5:4799531-4790979 | 20130731
Length = 438
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/438 (93%), Positives = 417/438 (95%)
Query: 1 MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY 60
MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY
Sbjct: 1 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY 60
Query: 61 MRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120
MR FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61 MRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120
Query: 121 DFGYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAYKKNEV 180
DFGYPQNLSPEILKLYITQEGVRSPFSSK ++RPVPNATLQVTGAVGWRREGL YKKNEV
Sbjct: 121 DFGYPQNLSPEILKLYITQEGVRSPFSSKASERPVPNATLQVTGAVGWRREGLVYKKNEV 180
Query: 181 FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSRPT 240
FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQ+KSRPT
Sbjct: 181 FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 240
Query: 241 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE 300
KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE
Sbjct: 241 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE 300
Query: 301 LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVWKI 360
LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKT+FTVTSGRAKYNA+IDCLVWKI
Sbjct: 301 LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTSFTVTSGRAKYNAAIDCLVWKI 360
Query: 361 RKFPGQTEPTLSAEVELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420
RKFPGQTEPTLSAE+ELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN
Sbjct: 361 RKFPGQTEPTLSAEIELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYN 420
Query: 421 TVEWVRYITKAGSYEIRC 438
TVEWVRYITKAGSYEIRC
Sbjct: 421 TVEWVRYITKAGSYEIRC 438
>Medtr5g014330.2 | clathrin-adaptor medium chain AP-2 | HC |
chr5:4799487-4791529 | 20130731
Length = 407
Score = 762 bits (1968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/398 (92%), Positives = 377/398 (94%)
Query: 1 MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY 60
MPVAASA+YFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY
Sbjct: 1 MPVAASAVYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELGTCPVKQIGGCSFFY 60
Query: 61 MRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120
MR FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM
Sbjct: 61 MRISNVYIVIVVSTNANVACAFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIM 120
Query: 121 DFGYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAYKKNEV 180
DFGYPQNLSPEILKLYITQEGVRSPFSSK ++RPVPNATLQVTGAVGWRREGL YKKNEV
Sbjct: 121 DFGYPQNLSPEILKLYITQEGVRSPFSSKASERPVPNATLQVTGAVGWRREGLVYKKNEV 180
Query: 181 FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSRPT 240
FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQ+KSRPT
Sbjct: 181 FLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQLKSRPT 240
Query: 241 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE 300
KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE
Sbjct: 241 KSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKE 300
Query: 301 LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVWKI 360
LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKT+FTVTSGRAKYNA+IDCLVWKI
Sbjct: 301 LGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTSFTVTSGRAKYNAAIDCLVWKI 360
Query: 361 RKFPGQTEPTLSAEVELISTMTEKKSWTRPPIQMEFQV 398
RKFPGQTEPTLSAE+ELISTMTEKKSWTRPPIQMEFQV
Sbjct: 361 RKFPGQTEPTLSAEIELISTMTEKKSWTRPPIQMEFQV 398
>Medtr8g069565.1 | clathrin assembly protein AP47, putative | HC |
chr8:29197875-29203803 | 20130731
Length = 428
Score = 354 bits (909), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 187/440 (42%), Positives = 267/440 (60%), Gaps = 17/440 (3%)
Query: 1 MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTK--ELGTCPVKQIGGCSF 58
M AASA++ L+++G VLI R YR DV + F T +++ + + PV G S+
Sbjct: 1 MSGAASALFLLDIKGRVLIWRDYRGDVSAVEAERFFTKLIEKEGDQQSQDPVVYDNGVSY 60
Query: 59 FYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
+++ F+ V +FK YF +E+++R+NFV++YELLDE
Sbjct: 61 MFVQHSNVYLMTATRQNCNAASLLFFLHRIVDVFKHYFE-ELEEESLRDNFVVVYELLDE 119
Query: 119 IMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAYKKN 178
IMDFGYPQ +IL +I + R + +P + VT AV WR EGL YKKN
Sbjct: 120 IMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPP--------MAVTNAVSWRSEGLNYKKN 171
Query: 179 EVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSR 238
EVFLD+VESVN+L++S G ++R DV G + M+ +LSGMP+ KLGLND+I LE + R
Sbjct: 172 EVFLDVVESVNILVNSNGQIIRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQG----R 227
Query: 239 PTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTI 298
TK GK I+L+D+ FHQCV L RF +++T+SF+PPDG F+LM YR++ V F V +
Sbjct: 228 ATK-GKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLFWVEAQV 286
Query: 299 KELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVW 358
++ ++R+E+ VK +S F + A V +++PVP N + G A Y D L+W
Sbjct: 287 EKHSKSRIEITVKARSQFKERSTATNVEIELPVPADATTPNVRTSMGSAAYAPEKDALIW 346
Query: 359 KIRKFPGQTEPTLSAEVELISTMTEKKSWTR-PPIQMEFQVPMFTASGLRVRFLKVWEKS 417
KIR FPG E L AE L S E+ + R PI+++F++P FT SG++VR+LK+ EKS
Sbjct: 347 KIRSFPGGKEYMLRAEFRLPSITDEEAAPERKAPIRLKFEIPYFTVSGIQVRYLKIIEKS 406
Query: 418 GYNTVEWVRYITKAGSYEIR 437
GY + WVRYIT AG YE+R
Sbjct: 407 GYQALPWVRYITMAGEYELR 426
>Medtr5g033500.1 | clathrin assembly protein AP47, putative | HC |
chr5:14425505-14431918 | 20130731
Length = 428
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/440 (41%), Positives = 265/440 (60%), Gaps = 17/440 (3%)
Query: 1 MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIM--QTKELGTCPVKQIGGCSF 58
M AASA++ L+++G +L+ R YR DV + F T ++ Q E PV G ++
Sbjct: 1 MSGAASALFLLDIKGRILVWRDYRGDVSAIEAERFFTKLIDKQADEQSQDPVVYDNGVTY 60
Query: 59 FYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
+++ F+ V +FK YF +E+++R+NFV++YELLDE
Sbjct: 61 MFIQHSNVYLVIAARQNCNAASLLFFLHRLVDVFKHYFE-ELEEESLRDNFVVVYELLDE 119
Query: 119 IMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAYKKN 178
IMDFGYPQ +IL +I + R + +P + VT AV WR EG++YKKN
Sbjct: 120 IMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPP--------MAVTNAVSWRSEGISYKKN 171
Query: 179 EVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSR 238
EVFLD+VESVN+L++S G ++R DV G + M+ FLSGMP+ KLGLND++ LE + +
Sbjct: 172 EVFLDVVESVNILVNSNGQLIRSDVVGALKMRTFLSGMPECKLGLNDRVLLEAQGR---- 227
Query: 239 PTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTI 298
T GK I+L+D+ FHQCV L RF +++T+SF+PPDG F+LM YR++ V V +
Sbjct: 228 -TTKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEANV 286
Query: 299 KELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVW 358
++ ++R+E+ VK +S F + A V +++PVP N + G A Y D L+W
Sbjct: 287 EKHSKSRIEIMVKARSQFKERSTATNVEIELPVPVDATNPNVRTSMGSASYAPEKDALIW 346
Query: 359 KIRKFPGQTEPTLSAEVELISTMTEKKSWTR-PPIQMEFQVPMFTASGLRVRFLKVWEKS 417
KIR FPG E L AE L S E+ + R PI+++F++P FT SG++VR+LK+ EKS
Sbjct: 347 KIRSFPGGKEYMLRAEFRLPSITDEEAAPERKAPIRVKFEIPYFTVSGIQVRYLKIIEKS 406
Query: 418 GYNTVEWVRYITKAGSYEIR 437
GY + WVRYIT AG YE+R
Sbjct: 407 GYQALPWVRYITMAGEYELR 426
>Medtr5g033500.2 | clathrin assembly protein AP47, putative | HC |
chr5:14425505-14431872 | 20130731
Length = 362
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/323 (39%), Positives = 194/323 (60%), Gaps = 16/323 (4%)
Query: 1 MPVAASAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIM--QTKELGTCPVKQIGGCSF 58
M AASA++ L+++G +L+ R YR DV + F T ++ Q E PV G ++
Sbjct: 1 MSGAASALFLLDIKGRILVWRDYRGDVSAIEAERFFTKLIDKQADEQSQDPVVYDNGVTY 60
Query: 59 FYMRXXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDE 118
+++ F+ V +FK YF +E+++R+NFV++YELLDE
Sbjct: 61 MFIQHSNVYLVIAARQNCNAASLLFFLHRLVDVFKHYFE-ELEEESLRDNFVVVYELLDE 119
Query: 119 IMDFGYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAYKKN 178
IMDFGYPQ +IL +I + R + +P + VT AV WR EG++YKKN
Sbjct: 120 IMDFGYPQYTEAKILSEFIKTDAYRMEVTQRPP--------MAVTNAVSWRSEGISYKKN 171
Query: 179 EVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSR 238
EVFLD+VESVN+L++S G ++R DV G + M+ FLSGMP+ KLGLND++ LE + +
Sbjct: 172 EVFLDVVESVNILVNSNGQLIRSDVVGALKMRTFLSGMPECKLGLNDRVLLEAQGR---- 227
Query: 239 PTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTI 298
T GK I+L+D+ FHQCV L RF +++T+SF+PPDG F+LM YR++ V V +
Sbjct: 228 -TTKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIWVEANV 286
Query: 299 KELGRTRMEVNVKVKSVFGAKMF 321
++ ++R+E+ VK +S F + +
Sbjct: 287 EKHSKSRIEIMVKARSQFKERRY 309
>Medtr3g112190.1 | AP-4 complex subunit mu-1 | HC |
chr3:52543098-52538217 | 20130731
Length = 442
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 235/453 (51%), Gaps = 33/453 (7%)
Query: 6 SAIYFLNLRGDVLINRLYRDDVGGNMVDAFRTHIMQTKELG---TCPVKQIGGCSFFYMR 62
S + L+ RGD ++ R YR +V + F + KE PV + G ++F+++
Sbjct: 3 SQFFVLSQRGDNIVFRDYRGEVQKGSAETFFRKVKFWKEDADGDAPPVFNVDGVNYFHVK 62
Query: 63 XXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDF 122
+ + + K Y G +ED+ R NFVL+YELLDE++DF
Sbjct: 63 VAGLLFVATTRINVSPSLVLELLHRTARVIKDYLG-VLNEDSFRKNFVLVYELLDEVIDF 121
Query: 123 GYPQNLSPEILKLYITQEGVRSPFSSKPADRPVPNATLQVTGAVGWRREGLAY------- 175
GY Q S E+LK Y+ E P + + P+ A++ + G R G A
Sbjct: 122 GYVQTTSTEVLKSYVFNE----PIVIESSQMPLGPASIFMQGT--KRMPGTAITKSVVAN 175
Query: 176 -----KKNEVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLE 230
K++E+F+D++E ++L +S G +L ++ G I MK +L+G P+++L LN+ +
Sbjct: 176 EPGGRKRDEIFVDVIEKISLTFNSSGFILTSEIDGTIQMKSYLTGNPEIRLALNEDL--- 232
Query: 231 KESQIKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNL 290
I + + + LDD FH+ V+L F+ ++T+S VPPDGEF +M YRIT+
Sbjct: 233 ---SIGTSDYRGSGAVILDDCNFHESVHLDSFDIDRTLSLVPPDGEFPVMNYRITQAFKP 289
Query: 291 PFKVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYN 350
PF++ I+E G + EV +KV++ F + + A V+V++P+P TA+ NF + G +
Sbjct: 290 PFRINALIEETGPLKAEVTIKVRAEFNSSINANTVLVRMPLPAFTARVNFELEPGAVGHT 349
Query: 351 ASI----DCLVWKIRKFPGQTEPTLSAEVELISTMTEKKSWTRPPIQMEFQVPMFTASGL 406
L W ++K G +E TL A++ + P+ M F +PM+ +S L
Sbjct: 350 TDFKEANKKLEWGLKKVVGGSEHTLRAKLTFSQELHGNIMKEAGPLSMTFTIPMYNSSRL 409
Query: 407 RVRFLKVWEKS-GYNTVEWVRYITKAGSYEIRC 438
+V++L++ +KS +N WVRY+T+A SY R
Sbjct: 410 QVKYLQIAKKSKAHNPYRWVRYVTQANSYVARL 442
>Medtr5g066050.1 | clathrin-adaptor medium chain AP-2 | HC |
chr5:27832038-27823989 | 20130731
Length = 451
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 145/457 (31%), Positives = 230/457 (50%), Gaps = 32/457 (7%)
Query: 6 SAIYFLNLRGDVLINRLYRDDVGGNMVDAF--RTHIMQTKELGTCP-VKQIGGCSFFYMR 62
S + L+ RGD ++ R YR +V + F + + EL P V + G ++F+++
Sbjct: 3 SQFFVLSQRGDNIVFRDYRGEVPRGSAEIFFRKVKFWEDGELQEAPPVFNVDGVNYFHVK 62
Query: 63 XXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDF 122
F+ + + K Y G +ED++R NFVL+YELLDE++DF
Sbjct: 63 VVGLLFVATTRVNISPSFVFELLQRIARVIKDYLG-ILNEDSLRKNFVLVYELLDEVIDF 121
Query: 123 GYPQNLSPEILKLYITQE------------GVRSPFSSKPADRPVPNATLQV--TGAVGW 168
GY Q S E+LK YI E G + FS P T V T G
Sbjct: 122 GYVQTTSTELLKSYIFNEPLVIDAARLSPLGPAAIFSQGTKRMPGIAVTKSVVATEPGGR 181
Query: 169 RREGLAYKKNEVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLND--K 226
RRE E+F+DI+E +++ SS G +L ++ G I MK +L+G P+++L LND
Sbjct: 182 RRE-------EIFVDIIEKISITFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLS 234
Query: 227 IGLEKESQIKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITE 286
IG + R + + LDD FH+ V L F + +T+S +PPDGEF +M YR+T+
Sbjct: 235 IGRSEGPISGYRSSSGSGAVVLDDCNFHESVRLDSFETNRTLSLIPPDGEFPVMNYRMTQ 294
Query: 287 GVNLPFKVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSG- 345
PF++ I+E G + EV +K+ + F + + A + V++P+PK T + +F + G
Sbjct: 295 PFKPPFRINALIEEAGSLKAEVFLKLSAEFASSITANTIKVQMPLPKYTTRVSFELEPGA 354
Query: 346 ---RAKYNASIDCLVWKIRKFPGQTEPTLSAEVELISTMTEKKSWTRPPIQMEFQVPMFT 402
+ + L W ++K G +E TL A++ + P+ M F +PM
Sbjct: 355 TGQTTDFREANKKLEWSLKKINGGSEHTLRAKLTFSQESHGNITKESGPVSMTFTIPMHN 414
Query: 403 ASGLRVRFLKVWEKSG-YNTVEWVRYITKAGSYEIRC 438
S L+V++L++ +KSG + WVRY+T+A SY R
Sbjct: 415 VSQLQVKYLQIGKKSGSHEPYRWVRYVTQANSYVARI 451
>Medtr5g066050.2 | clathrin-adaptor medium chain AP-2 | HC |
chr5:27832038-27823989 | 20130731
Length = 450
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 232/452 (51%), Gaps = 23/452 (5%)
Query: 6 SAIYFLNLRGDVLINRLYRDDVGGNMVDAF--RTHIMQTKELGTCP-VKQIGGCSFFYMR 62
S + L+ RGD ++ R YR +V + F + + EL P V + G ++F+++
Sbjct: 3 SQFFVLSQRGDNIVFRDYRGEVPRGSAEIFFRKVKFWEDGELQEAPPVFNVDGVNYFHVK 62
Query: 63 XXXXXXXXXXXXXXXXXXXFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDF 122
F+ + + K Y G +ED++R NFVL+YELLDE++DF
Sbjct: 63 VVGLLFVATTRVNISPSFVFELLQRIARVIKDYLG-ILNEDSLRKNFVLVYELLDEVIDF 121
Query: 123 GYPQNLSPEILKLYITQEGV---------RSPFSSKPADRPVPNATLQVTGAVGWRREGL 173
GY Q S E+LK YI E + P + + +P + VT +V G
Sbjct: 122 GYVQTTSTELLKSYIFNEPLVIDAARLSPLGPAAIFSGTKRMPG--IAVTKSVVATEPG- 178
Query: 174 AYKKNEVFLDIVESVNLLMSSKGVVLRCDVTGKILMKCFLSGMPDLKLGLND--KIGLEK 231
++ E+F+DI+E +++ SS G +L ++ G I MK +L+G P+++L LND IG +
Sbjct: 179 GRRREEIFVDIIEKISITFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRSE 238
Query: 232 ESQIKSRPTKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLP 291
R + + LDD FH+ V L F + +T+S +PPDGEF +M YR+T+ P
Sbjct: 239 GPISGYRSSSGSGAVVLDDCNFHESVRLDSFETNRTLSLIPPDGEFPVMNYRMTQPFKPP 298
Query: 292 FKVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFTVTSG----RA 347
F++ I+E G + EV +K+ + F + + A + V++P+PK T + +F + G
Sbjct: 299 FRINALIEEAGSLKAEVFLKLSAEFASSITANTIKVQMPLPKYTTRVSFELEPGATGQTT 358
Query: 348 KYNASIDCLVWKIRKFPGQTEPTLSAEVELISTMTEKKSWTRPPIQMEFQVPMFTASGLR 407
+ + L W ++K G +E TL A++ + P+ M F +PM S L+
Sbjct: 359 DFREANKKLEWSLKKINGGSEHTLRAKLTFSQESHGNITKESGPVSMTFTIPMHNVSQLQ 418
Query: 408 VRFLKVWEKSG-YNTVEWVRYITKAGSYEIRC 438
V++L++ +KSG + WVRY+T+A SY R
Sbjct: 419 VKYLQIGKKSGSHEPYRWVRYVTQANSYVARI 450
>Medtr7g111870.3 | clathrin adaptor complexes medium subunit family
protein | HC | chr7:45960804-45965006 | 20130731
Length = 411
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 185/364 (50%), Gaps = 38/364 (10%)
Query: 82 FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEG 141
+F+ + Y GG +ED+I++NFV++YELLDE++D G+P P IL+ I
Sbjct: 77 IEFLCRVADVINDYLGG-LNEDSIKDNFVIVYELLDEMIDNGFPLTTEPNILQEMIAPPN 135
Query: 142 VRSPF-------SSKPADRPVPNATLQVTGAVGWRREGLAYKKNEVFLDIVESVNLLMSS 194
+ S SS +D +P +T V WR Y NEV++D+VE ++ ++
Sbjct: 136 IVSKVLSVVTGNSSNVSDT-LPGST---ASCVPWRTADPKYANNEVYVDLVEQMDATINR 191
Query: 195 KGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSRPTKSGKTIELDDVTFH 254
G +++C++ G++ + ++G+PDL L + P+ LDDV FH
Sbjct: 192 DGTLVKCEINGEVQVNSHITGLPDLTLSF-------------TNPSI------LDDVRFH 232
Query: 255 QCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKELGRT-RMEVNVKVK 313
CV + S + +SFVPPDG+F+LM YR+ + + P V P + G T R+ V V ++
Sbjct: 233 PCVRFRPWESNQILSFVPPDGQFKLMNYRVRKLKSTPIYVKPQLTSDGGTCRLNVMVGMR 292
Query: 314 SVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVWKIRKFPGQTEPTLSA 373
+ G + ++ V ++P +A + T T G ++ C W I + P P++S
Sbjct: 293 NDPGKTVDSVNVQFQLPPCILSA--DLTSTHGTVNILSNKTC-TWSIGRIPKDKAPSMSG 349
Query: 374 EVELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGS 433
+ L + M ++ P Q++F++ SGL++ L + + Y + R +T+AG
Sbjct: 350 TLVLETGM--ERLHVFPTFQVDFRIMGVALSGLKIDKLDL-KTVPYRFYKGFRALTRAGE 406
Query: 434 YEIR 437
+E+R
Sbjct: 407 FEVR 410
>Medtr7g111870.1 | clathrin adaptor complexes medium subunit family
protein | HC | chr7:45961216-45965010 | 20130731
Length = 411
Score = 159 bits (401), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 185/364 (50%), Gaps = 38/364 (10%)
Query: 82 FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEG 141
+F+ + Y GG +ED+I++NFV++YELLDE++D G+P P IL+ I
Sbjct: 77 IEFLCRVADVINDYLGG-LNEDSIKDNFVIVYELLDEMIDNGFPLTTEPNILQEMIAPPN 135
Query: 142 VRSPF-------SSKPADRPVPNATLQVTGAVGWRREGLAYKKNEVFLDIVESVNLLMSS 194
+ S SS +D +P +T V WR Y NEV++D+VE ++ ++
Sbjct: 136 IVSKVLSVVTGNSSNVSDT-LPGST---ASCVPWRTADPKYANNEVYVDLVEQMDATINR 191
Query: 195 KGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSRPTKSGKTIELDDVTFH 254
G +++C++ G++ + ++G+PDL L + P+ LDDV FH
Sbjct: 192 DGTLVKCEINGEVQVNSHITGLPDLTLSF-------------TNPSI------LDDVRFH 232
Query: 255 QCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKELGRT-RMEVNVKVK 313
CV + S + +SFVPPDG+F+LM YR+ + + P V P + G T R+ V V ++
Sbjct: 233 PCVRFRPWESNQILSFVPPDGQFKLMNYRVRKLKSTPIYVKPQLTSDGGTCRLNVMVGMR 292
Query: 314 SVFGAKMFALGVVVKIPVPKQTAKTNFTVTSGRAKYNASIDCLVWKIRKFPGQTEPTLSA 373
+ G + ++ V ++P +A + T T G ++ C W I + P P++S
Sbjct: 293 NDPGKTVDSVNVQFQLPPCILSA--DLTSTHGTVNILSNKTC-TWSIGRIPKDKAPSMSG 349
Query: 374 EVELISTMTEKKSWTRPPIQMEFQVPMFTASGLRVRFLKVWEKSGYNTVEWVRYITKAGS 433
+ L + M ++ P Q++F++ SGL++ L + + Y + R +T+AG
Sbjct: 350 TLVLETGM--ERLHVFPTFQVDFRIMGVALSGLKIDKLDL-KTVPYRFYKGFRALTRAGE 406
Query: 434 YEIR 437
+E+R
Sbjct: 407 FEVR 410
>Medtr7g111870.2 | clathrin adaptor complexes medium subunit family
protein | HC | chr7:45961316-45965000 | 20130731
Length = 333
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 135/257 (52%), Gaps = 32/257 (12%)
Query: 82 FKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDFGYPQNLSPEILKLYITQEG 141
+F+ + Y GG +ED+I++NFV++YELLDE++D G+P P IL+ I
Sbjct: 77 IEFLCRVADVINDYLGG-LNEDSIKDNFVIVYELLDEMIDNGFPLTTEPNILQEMIAPPN 135
Query: 142 VRSPF-------SSKPADRPVPNATLQVTGAVGWRREGLAYKKNEVFLDIVESVNLLMSS 194
+ S SS +D +P +T V WR Y NEV++D+VE ++ ++
Sbjct: 136 IVSKVLSVVTGNSSNVSDT-LPGST---ASCVPWRTADPKYANNEVYVDLVEQMDATINR 191
Query: 195 KGVVLRCDVTGKILMKCFLSGMPDLKLGLNDKIGLEKESQIKSRPTKSGKTIELDDVTFH 254
G +++C++ G++ + ++G+PDL L + P+ LDDV FH
Sbjct: 192 DGTLVKCEINGEVQVNSHITGLPDLTLSF-------------TNPSI------LDDVRFH 232
Query: 255 QCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGVNLPFKVLPTIKELGRT-RMEVNVKVK 313
CV + S + +SFVPPDG+F+LM YR+ + + P V P + G T R+ V V ++
Sbjct: 233 PCVRFRPWESNQILSFVPPDGQFKLMNYRVRKLKSTPIYVKPQLTSDGGTCRLNVMVGMR 292
Query: 314 SVFGAKMFALGVVVKIP 330
+ G + ++ V ++P
Sbjct: 293 NDPGKTVDSVNVQFQLP 309