Miyakogusa Predicted Gene

Lj2g3v1984730.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1984730.2 Non Characterized Hit- tr|I1G0U1|I1G0U1_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica PE,36.42,5e-17,no
description,NULL; coiled-coil,NULL; ACETYLORNITHINE DEACETYLASE,NULL;
PEPTIDASE M20 FAMILY MEMBER,CUFF.38215.2
         (289 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g014410.1 | M20 peptidase acetylornithine deacetylase | HC...   549   e-156

>Medtr5g014410.1 | M20 peptidase acetylornithine deacetylase | HC |
           chr5:4846984-4851709 | 20130731
          Length = 439

 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 261/295 (88%), Positives = 278/295 (94%), Gaps = 6/295 (2%)

Query: 1   MRKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVKDGLLNKLKNGPLFWIDTADKQP 60
           M+KLGETKPNLKSTVVAVFIANEENSAITGVGVDALV+DGLLNKLK GPLFWIDTADKQP
Sbjct: 145 MKKLGETKPNLKSTVVAVFIANEENSAITGVGVDALVQDGLLNKLKEGPLFWIDTADKQP 204

Query: 61  CVGTGGMIPWKLHVTGKLFHSGLAHKAINPLELAMDAMKEIQLRFYRDFPPHPQEQVYGF 120
           CVGTGGMIPWKLHVTGK+FHSGLAHKAINPLELAMDA+KEIQL+FY DFPPHPQEQVYGF
Sbjct: 205 CVGTGGMIPWKLHVTGKMFHSGLAHKAINPLELAMDAIKEIQLKFYNDFPPHPQEQVYGF 264

Query: 121 ATPSTMKPTQWSYPGGGINQIPGECTISGDV------SVKDVMKKLQEYVGDINENISKL 174
           ATPSTMKPTQWSYPGGGINQIPGECTISGDV      +VKDVMKKLQEYV +INENI KL
Sbjct: 265 ATPSTMKPTQWSYPGGGINQIPGECTISGDVRLTPFYNVKDVMKKLQEYVDEINENIHKL 324

Query: 175 EARGPVSKYVLSDENLRGSLTITFDEAMSGVACDLNSRGFHVLCKATEEVVGHVKPYSMT 234
           E+RGPVSKY LSDENLRGSLT+TFDEA SGVAC+L+SRGFHVLCKATEE+VGHVKP+S+T
Sbjct: 325 ESRGPVSKYALSDENLRGSLTLTFDEANSGVACNLDSRGFHVLCKATEEIVGHVKPFSIT 384

Query: 235 GSLPLIRELQDEGFDVQTSGYGLMATYHAQNEYCLFNDMSQGYRVFTSVISQLED 289
           GSLPLIREL+DEGFDVQ  GYGLMATYHAQNEYCLF DM QGYRVF S+I+QLED
Sbjct: 385 GSLPLIRELKDEGFDVQCCGYGLMATYHAQNEYCLFTDMCQGYRVFASIIAQLED 439