Miyakogusa Predicted Gene

Lj2g3v1981870.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1981870.1 tr|C6FDB1|C6FDB1_9CONI Phloem protein (Fragment)
OS=Pseudotsuga macrocarpa PE=4 SV=1,40.83,2e-18,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.38155.1
         (423 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g015150.1 | phloem A10-like protein | HC | chr5:5212723-52...   552   e-157
Medtr3g103320.1 | phloem A10-like protein | HC | chr3:47656882-4...   336   3e-92

>Medtr5g015150.1 | phloem A10-like protein | HC |
           chr5:5212723-5211099 | 20130731
          Length = 413

 Score =  552 bits (1423), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 279/418 (66%), Positives = 320/418 (76%), Gaps = 9/418 (2%)

Query: 9   ELQLVEKGFDYIRKRKKWIFISVALGF---CAYSAYHAPSIARKRRKLSKLLGALFSVAE 65
           ELQLVE  FDYIRKRKKW  I + +GF    +Y AYHAP IARKR K+SKLL  + SVAE
Sbjct: 2   ELQLVENAFDYIRKRKKWTLILIGIGFSSYVSYRAYHAPFIARKRNKISKLLNTMVSVAE 61

Query: 66  AVAESADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLR 125
           AV+ESADTIG++++D+K FLQSDSD VP SLNQI+K++RS+ FSDSL +VT AVTVGV+ 
Sbjct: 62  AVSESADTIGIVTKDVKNFLQSDSDHVPNSLNQIAKLSRSKQFSDSLVSVTRAVTVGVVN 121

Query: 126 GNQSANRTGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCSDGVQSH 185
           G QS NR    Q+G  S+V D V DKL TP GSGFASVV+GSFARN+VL FY   GV+  
Sbjct: 122 GYQSMNRVDENQSG--SNVADQVFDKLFTPAGSGFASVVVGSFARNIVLGFYSDAGVKFS 179

Query: 186 DEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHI 245
                                VP WVD VC ++CGELIGN VQLFVST VAV+LDKTMHI
Sbjct: 180 GG--SDSSSGESGCSDSNAPGVPKWVDVVCSDKCGELIGNFVQLFVSTLVAVYLDKTMHI 237

Query: 246 NTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIG 305
           NTYD+FF+GLTNPKHE  VR+ML+ VCNGAIES VKTSH V  ++ P D SGS S  D G
Sbjct: 238 NTYDEFFSGLTNPKHETRVREMLVDVCNGAIESLVKTSHEVFNTSNPNDSSGSGSYFDAG 297

Query: 306 ETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSF 365
           ET  + VETS +ES+  DVC EE+K GWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSF
Sbjct: 298 ETLSS-VETSCVESER-DVCDEEDKGGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSF 355

Query: 366 MEFVLKTLCASVRRCAHSVHDAVLEIMRYAAAKFSVIATICISLCLHVMDCPRALVPA 423
           MEF+L+TLC SVRRCAH+VH  V+EIMRYAAAKFSVI  IC+ LCLH+MDC  ALVPA
Sbjct: 356 MEFILQTLCGSVRRCAHNVHKEVVEIMRYAAAKFSVIVAICLVLCLHIMDCNWALVPA 413


>Medtr3g103320.1 | phloem A10-like protein | HC |
           chr3:47656882-47658609 | 20130731
          Length = 397

 Score =  336 bits (861), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 184/422 (43%), Positives = 263/422 (62%), Gaps = 36/422 (8%)

Query: 13  VEKGFDYIRKRKKWIFISVALGFC---AYSAYHAPSIARKRRKLSKLLGALFSVAEAVAE 69
           +E    + RK +K + +   LGF    AY AYH P + +KR + +KLL A  S+AE  + 
Sbjct: 1   MELPLSFSRKHQKRLILIALLGFSGYGAYKAYHLPYVVQKRHRFTKLLKAFVSLAELASN 60

Query: 70  SADTIGVISRDMKEFLQSDSDQVPKSLNQISKVARSQHFSDSLTTVTHAVTVGVLRGNQS 129
           SA+T+ ++S D+ +FL+SDSD++P SL Q+SK+A S  FS +++ V+ ++T G+L G   
Sbjct: 61  SAETVSIVSNDLNKFLKSDSDEIPNSLKQLSKIAMSDEFSITISRVSKSLTQGILMGYGE 120

Query: 130 ANR---TGAEQTGAGSSVVDGVLDKLLTPEGSGFASVVLGSFARNLVLAFYCS-DGVQSH 185
             +    GAE+    S+  D VLDKL +  G+GF SVV+GSFARNLVL F    + V S 
Sbjct: 121 FEKPLEIGAEK----SNFSDRVLDKLTSEAGTGFVSVVVGSFARNLVLGFRSKLENVDSG 176

Query: 186 DEFXXXXXXXXXXXXXXXXXXVPAWVDAVCDERCGELIGNCVQLFVSTAVAVFLDKTMHI 245
            +                   V  +V  +CDE+CG++IG+CVQ FV+TAVAVFLDKTM +
Sbjct: 177 SK----------------SDGVSGFVSVICDEKCGKVIGDCVQTFVATAVAVFLDKTMDV 220

Query: 246 NTYDQFFAGLTNPKHEDSVRDMLMSVCNGAIESFVKTSHHVLTSAKPGDGSGSDSNLDIG 305
           NTYD+ FAG+TNPKH + V+ +L+S+CNGA+E+ VKTSH VLT+  P   S   S  + G
Sbjct: 221 NTYDEIFAGMTNPKHHEKVKGILVSLCNGAVETLVKTSHQVLTN--PKGKSDLSSPRENG 278

Query: 306 ETTPNRVETSTMESKGGDVCVEENKSGWVSKVSSTLAIPSNRRLVLDVTGRVTFETVRSF 365
              P   E    + + G        SGW+ +V STL++P+N+R V DVTGRVTFET RSF
Sbjct: 279 LLKP---EAYLQKFRNGGSVDGVGDSGWLEQVKSTLSVPANQRFVFDVTGRVTFETARSF 335

Query: 366 MEFVLKTLCASVRRCAHSVHDAV----LEIMRYAAAKFSVIATICISLCLHVMDCPRALV 421
           +EF+L  +   ++R  + VHD V    ++++RY  AK SVI T+C++L LH++   R LV
Sbjct: 336 VEFMLWRISEGLKRGVNKVHDDVVDKGMQVVRYVGAKSSVIITLCLALYLHILGGSRILV 395

Query: 422 PA 423
            A
Sbjct: 396 AA 397