Miyakogusa Predicted Gene

Lj2g3v1980770.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1980770.1 Non Characterized Hit- tr|I1J9G0|I1J9G0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.13891
PE,52.21,0.00000000000005,seg,NULL,CUFF.38143.1
         (199 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g015230.1 | hypothetical protein | HC | chr5:5250977-52526...   124   6e-29
Medtr5g015230.2 | hypothetical protein | HC | chr5:5250977-52521...    80   1e-15

>Medtr5g015230.1 | hypothetical protein | HC | chr5:5250977-5252618
           | 20130731
          Length = 172

 Score =  124 bits (311), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/189 (45%), Positives = 102/189 (53%), Gaps = 29/189 (15%)

Query: 5   DERKRRFNEGIVNLLYXXXXXXXXXXXXXXVEALNLIEXXXXXXXXXXXXXXXYIKSNAG 64
           DERKRRFNE IVN LY               +++ L                 Y    +G
Sbjct: 4   DERKRRFNEAIVNTLYPSSPQDLEPEE----DSVKL---------------QPYSDVISG 44

Query: 65  SLYDNENASTSGDEEEQHVDV-NLTRSQXXXXXXXXXXEEAMRRGNLIGPLLPLSSSTAT 123
           SL D ENASTSG+EE    ++  LTR+Q          EEA+ RG LIGPLLP    T  
Sbjct: 45  SLDDCENASTSGEEEGHDSEMEKLTRAQRKRIRKKKMKEEAILRGKLIGPLLP---PTQA 101

Query: 124 TQCADQVAVLEDAPSVRSNASEEGDDEPACAKSKKLKHRRMAKGMAKDKRVSVSKLESCN 183
           TQC D        P+VRSNAS+EGD E  C  SKK+K RRMAK +AK+KRV+ S L+ CN
Sbjct: 102 TQCGDDAP----PPTVRSNASQEGD-ETVCVNSKKMKQRRMAKRVAKEKRVA-SPLDKCN 155

Query: 184 QGSISSSVV 192
           Q SISS  V
Sbjct: 156 QSSISSDAV 164


>Medtr5g015230.2 | hypothetical protein | HC | chr5:5250977-5252119
           | 20130731
          Length = 134

 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/148 (41%), Positives = 73/148 (49%), Gaps = 28/148 (18%)

Query: 1   MNRDDERKRRFNEGIVNLLYXXXXXXXXXXXXXXVEALNLIEXXXXXXXXXXXXXXXYIK 60
           M+RD ERKRRFNE IVN LY               +++ L                 Y  
Sbjct: 1   MSRD-ERKRRFNEAIVNTLYPSSPQDLEPEE----DSVKL---------------QPYSD 40

Query: 61  SNAGSLYDNENASTSGDEEEQHVDV-NLTRSQXXXXXXXXXXEEAMRRGNLIGPLLPLSS 119
             +GSL D ENASTSG+EE    ++  LTR+Q          EEA+ RG LIGPLLP   
Sbjct: 41  VISGSLDDCENASTSGEEEGHDSEMEKLTRAQRKRIRKKKMKEEAILRGKLIGPLLP--- 97

Query: 120 STATTQCADQVAVLEDAPSVRSNASEEG 147
            T  TQC D        P+VRSNAS+EG
Sbjct: 98  PTQATQCGDDAP----PPTVRSNASQEG 121