Miyakogusa Predicted Gene

Lj2g3v1979690.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1979690.1 tr|F2D2B0|F2D2B0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,28.99,0.0000000000001,DUF2215,Transmembrane protein 194;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.38136.1
         (490 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g015280.1 | transmembrane protein, putative | HC | chr5:52...   683   0.0  
Medtr7g086460.1 | transmembrane protein, putative | HC | chr7:33...   246   3e-65

>Medtr5g015280.1 | transmembrane protein, putative | HC |
           chr5:5273365-5279899 | 20130731
          Length = 485

 Score =  683 bits (1762), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/490 (70%), Positives = 391/490 (79%), Gaps = 7/490 (1%)

Query: 3   MARTHSSRSAWILRLFFLCASAILAFADE-RSLSLDHNTTLLRLSNGLPVRNSPGTKIGS 61
           MA T + +S+  LRL  L ASA+L  A+E RSL +  NTTL  LS GLPVRNSPG+K G 
Sbjct: 1   MACTRTPQSSSFLRLILLWASAVLVLANEQRSLFIVENTTL-PLSRGLPVRNSPGSKPGV 59

Query: 62  TVLVERVHIHGLPRFTNLGKFSHSVKVKVLPASSDVRVPNIEVCFHRNASLAAGMCPQSQ 121
           T++VERVHIHGL RF NL KF+HSVKVKV PA+S+VRVPNIEVCFHRNASLA GMCPQ Q
Sbjct: 60  TLIVERVHIHGLSRFRNLVKFAHSVKVKVFPANSNVRVPNIEVCFHRNASLATGMCPQGQ 119

Query: 122 WEKVTKGYWARSMSPFDHKLLDIRTAGSTLENFKVSTDEEFFAYRVVLLVLGIILMSTAA 181
           WEK  KG W R+MSPFDHKLLDIRTAGSTLENF+VS +EEFFAYR+VLL+LGI LMS+AA
Sbjct: 120 WEKAVKGSWVRTMSPFDHKLLDIRTAGSTLENFEVSAEEEFFAYRIVLLILGITLMSSAA 179

Query: 182 FVSKSLVFYYSSAMAXXXXXXXXXXXYQGMKLLPTGRKSSLAIFLYSSAVGFGGFLLRYV 241
           F+S+SL FYYSSAMA           YQGMKLLPTGRKSSLAIFLYSSA+G G FLLRY+
Sbjct: 180 FLSQSLTFYYSSAMAIGIILVILIILYQGMKLLPTGRKSSLAIFLYSSAIGLGTFLLRYI 239

Query: 242 PDLIRSVLTELGIDQDMYNPLAIFLLTFVAIAGAWMGFWVVHKLVLTEDGSVDISTAQFV 301
           P L+RS+LTELGID+DMYNPLAIFLLTFVAIAGAW+GFWVV KLVLTE+GSVD+STAQFV
Sbjct: 240 PGLVRSILTELGIDEDMYNPLAIFLLTFVAIAGAWLGFWVVKKLVLTEEGSVDMSTAQFV 299

Query: 302 AWAIRILAVIMILQSSMDPLLGTLAIFCGSFIPXXXXXXXXXXXXXXXXXXXXSPKKN-R 360
           AWAIRILA IMILQSSMDPLLGTLA+ CGS +P                    SP+KN R
Sbjct: 300 AWAIRILAAIMILQSSMDPLLGTLALLCGSLVPSLKRILRLRFLRRLRRRLFKSPEKNRR 359

Query: 361 RSQVSDSPPFHNSHDEHEYKMQTKEDSLLLRPKPKSFTFTSCKPSERGFSRTPPKMVTEE 420
           RSQV +  PF    DE+   +   EDS   RP+ KS + T CK SERGF+R+ PKM+TEE
Sbjct: 360 RSQVYNPSPFDYEDDEY---IDNIEDSTPNRPQVKSSSMTPCKSSERGFNRSLPKMLTEE 416

Query: 421 LHPSIIHTTPERRKYSAAEWDAFTKKSTEKALEELVASPDFGKWLSNNADRISVTPSTKT 480
           L+PSIIHTTPERRKYS AEWDAFTK+STEKALEELV SPDFGKWLS NADRISVTP+++T
Sbjct: 417 LYPSIIHTTPERRKYSPAEWDAFTKESTEKALEELVQSPDFGKWLSTNADRISVTPNSET 476

Query: 481 EQRRRWVLWS 490
            + RRW LWS
Sbjct: 477 NRARRW-LWS 485


>Medtr7g086460.1 | transmembrane protein, putative | HC |
           chr7:33562182-33566981 | 20130731
          Length = 518

 Score =  246 bits (629), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 162/486 (33%), Positives = 258/486 (53%), Gaps = 28/486 (5%)

Query: 17  LFFLCASAILAFADERS----LSLDHNTTLLRLSNGLPVRNSPGTKIGSTVLVERVHIHG 72
           LFF+  ++ LA  D+ S      +D     L +S  L +  S      + +  ERV + G
Sbjct: 19  LFFIFFTSSLANNDQSSPITLKGVDIERPTLDVSPSLLLGQSNTQGAKNIMRCERVQVSG 78

Query: 73  LPRFTNLGKFSHSVKVKVLPASSDVRVPN-----IEVCFHRNASLAAGMCPQSQWEKVTK 127
           + R   LG +++S+ V + P+   V +P      I+VCFHRN +L    C + +W  V K
Sbjct: 79  ISRL-KLGSYANSLHVTLAPS---VAIPERLHNKIKVCFHRNNTLGWCQCEKDEWRGVQK 134

Query: 128 GYWARSMSPFDHKLLDIRTAGSTLENFKVSTDEEFFAYRVVLLVLGIILMSTAAFVSKSL 187
           G W+  MSP++ + +D++     L +  V+  E+F  +R++ LV+G+IL+  A  VS  +
Sbjct: 135 GIWSAVMSPYETRYVDVKIDCEILRSVTVALKEDFQQWRLISLVVGLILLLLAPIVSSWV 194

Query: 188 VFYYSSAMAXXXXXXXXXXXYQGMKLLPTGRKSSLAIFLYSSAVGFGGFLLRYVPDLIRS 247
            FYYSS+MA           +QGMKLLPTGRK+ L I +Y S +G G  LL     ++ S
Sbjct: 195 PFYYSSSMAIGIFLVVIIILFQGMKLLPTGRKNFLYITIYGSVLGAGSILLHQFSMIVNS 254

Query: 248 VLTELGIDQDMYNPLAIFLLTFVAIAGAWMGFWVVHKLVLT-EDGSVDISTAQFVAWAIR 306
           +L  LG+ ++M+NP+A+ +L  + +AGA +G+W+V K V++ EDGSVD   AQFV WA+R
Sbjct: 255 ILQTLGMSEEMHNPVALSVLLGIILAGAALGYWIVRKFVISKEDGSVDAGVAQFVKWAMR 314

Query: 307 ILAVIMILQSSMDPLLGTLA-IFCGSFIPXXXXXXXXXXXXXXXXXXXXSPK-----KNR 360
           ++    +LQS++D  L   A +FCG+                       S +     + R
Sbjct: 315 VIGTTFVLQSTLDNTLAVGALVFCGAVCKLISSIQLLHEWYETSENDDYSLEWVRGTRGR 374

Query: 361 RSQVSDSPPFHNSHDEHEYKMQTKEDSLLLRPKPKSFTFTSCK----PSERGFSRTPPKM 416
              +S SPP     +  +   + K   +   PK  S++ +  +    PS  GFS      
Sbjct: 375 AEFLSKSPPKGKMWNSPKSGSKAK---MWNNPKRTSWSDSPVRGVVSPSS-GFSPQTSGT 430

Query: 417 VTEELHPSIIHTTPERRKYSAAEWDAFTKKSTEKALEELVASPDFGKWLSNNADRISVTP 476
            + E + S  H T  R+K++  EWD FT+ ST++AL E  ASP+F  W+ ++ADRI + P
Sbjct: 431 QSGENYYSTFHKTGNRKKFTKEEWDDFTRDSTKQALAEWAASPEFTDWIVDHADRIKLLP 490

Query: 477 STKTEQ 482
           S  +++
Sbjct: 491 SESSDE 496